Track Data Hubs

Track data hubs are collections of external tracks that can be added to the UCSC Genome Browser. Click Connect to attach a hub and redirect to the assembly gateway page. Hub tracks will then show up in the hub's own blue bar track group under the browser graphic. For more information, including where to host your track hub, see our User's Guide.

Track Hubs are created and maintained by external sources. UCSC is not responsible for their content.

Displayed list restricted by above search terms

When exploring the detailed search results for a hub, you may right-click on an assembly or track line to open it in a new window.

Hub Name	Description	AssembliesClick to connect and browse directly
dbVar Hub	NCBI's database of human genomic Structural Variation -- large variants >50 bp	hg19, hg38

Ensembl Regulatory Build	Evidence summaries and provisional results for the new Ensembl Regulatory Build	hg38, hg19, mm10

ReMap 2018 Regulatory Atlas	ReMap 2018: An atlas of regulatory regions from an integrative analysis of Human DNA-binding sequencing experiments. Go to ReMap for more info. Pubmed link.	hg38

ReMap 2020 Regulatory Atlas	ReMap 2020: An atlas of regulatory regions from an integrative analysis of Human and Arabidopsis thaliana DNA-binding sequencing experiments. Go to ReMap for more info.	hg38, araTha1

ReMap 2022 Regulatory Atlas	ReMap 2022: A database of Human, Mouse, Drosophila and Arabidopsis regulatory regions from an integrative analysis of DNA-binding sequencing experiments Go to ReMap2022 for more info.	mm10, mm39, hg38, hg19, dm6, araTha1

UniBind 2018 Hub	UniBind: A map of direct TF-DNA interactions from ChIP-seq and TF binding profiles	hg38

UniBind 2021 permissive Hub	UniBind 2021 hub for permissive direct TF-DNA interactions	[+] hg38, mm10, ce11, dm6, danRer11, spo2, sacCer3, rn6...

UniBind 2021 Robust Hub	UniBind 2021 hub for robust direct TF-DNA interactions	[+] hg38, mm10, ce11, dm6, danRer11, sacCer3, rn6, araTha1...

dbVar Hub	NCBI's database of human genomic Structural Variation -- large variants >50 bp	hg19, hg38
Ensembl Regulatory Build	Evidence summaries and provisional results for the new Ensembl Regulatory Build	hg38, hg19, mm10
ReMap 2018 Regulatory Atlas	ReMap 2018: An atlas of regulatory regions from an integrative analysis of Human DNA-binding sequencing experiments. Go to ReMap for more info. Pubmed link.	hg38
ReMap 2020 Regulatory Atlas	ReMap 2020: An atlas of regulatory regions from an integrative analysis of Human and Arabidopsis thaliana DNA-binding sequencing experiments. Go to ReMap for more info.	hg38, araTha1
ReMap 2022 Regulatory Atlas	ReMap 2022: A database of Human, Mouse, Drosophila and Arabidopsis regulatory regions from an integrative analysis of DNA-binding sequencing experiments Go to ReMap2022 for more info.	mm10, mm39, hg38, hg19, dm6, araTha1
UniBind 2018 Hub	UniBind: A map of direct TF-DNA interactions from ChIP-seq and TF binding profiles	hg38
UniBind 2021 permissive Hub	UniBind 2021 hub for permissive direct TF-DNA interactions	[+] hg38, mm10, ce11, dm6, danRer11, spo2, sacCer3, rn6...
UniBind 2021 Robust Hub	UniBind 2021 hub for robust direct TF-DNA interactions	[+] hg38, mm10, ce11, dm6, danRer11, sacCer3, rn6, araTha1...

Enter hub URLs below to connect hubs. Hubs connected this way are not accessible to other users by default.

If you wish to share your hub you can create a session link. First, connect the hub and configure the tracks image as desired, then navigate to My Sessions (My Data > My Sessions). The resulting stable link can be added to publications and shared freely. You, as the author, also have the power to update the session contents freely. Alternatively, you may build a link with the hub URL to allow users to retain their browser configuration, connected hubs, and custom tracks.

See our public hub guidelines for information on submitting a new public hub.

URL:
Display	Hub Name	Description	AssembliesClick to connect and browse directly. Click copy icon to copy URL to clipboard for sharing.
	ReMap 2020 Regulatory Atlas	ReMap 2020: An atlas of regulatory regions from an integrative analysis of Human and Arabidopsis thaliana DNA-binding sequencing experiments. Go to ReMap for more info.	hg38, araTha1
		ERROR: Couldn't open Debug Help

Create your own hub

For information on making track hubs, see the following pages:

You may also contact us if you have any issues or questions on hub development.

Check a hub for errors

Hub URL: Load Example URL

Use the URL bar above to check a hub for errors. This will validate the hub's configuration files, including hub.txt, genomes.txt and trackDb.txt. It will also present a hierarchical tree of tracks with any errors in red. A hub with no errors still shows the tree which can be used to explore the track hierarchy. Hub error checking will always refresh the files and never use our remote file cache (see below).

Enable Genome Browser debugging modes

These apply to all connected hubs. By default, caching is activated and track load times are not shown, but you can change these settings while developing your hub: