Control track and group visibility more selectively below.
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green_monkey_CMAH_gRNAs_SpCas9 |
| AS |
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Base Position |
| Chromosome position in bases. (Clicks here zoom in 3x) |
Assembly |
| Assembly from Fragments |
Gap |
| Gap Locations |
GC Percent |
| GC Percent in 5-Base Windows |
INSDC |
| Accession at INSDC - International Nucleotide Sequence Database Collaboration |
RefSeq Acc |
| RefSeq Accession |
Restr Enzymes |
| Restriction Enzymes from REBASE |
Short Match |
| Perfect Matches to Short Sequence () |
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NCBI RefSeq |
| RefSeq genes from NCBI |
AUGUSTUS |
| AUGUSTUS ab initio gene predictions v3.1 |
Ensembl Genes |
| Ensembl Genes |
Genscan Genes |
| Genscan Gene Predictions |
Other RefSeq |
| Non-Green monkey RefSeq Genes |
TOGA vs. hg38 |
| TOGA annotations using human/hg38 as reference |
TransMap V5 |
| TransMap Alignments Version 5 |
TransMap ESTs |
| TransMap EST Mappings Version 5 |
TransMap RNA |
| TransMap GenBank RNA Mappings Version 5 |
TransMap RefGene |
| TransMap RefSeq Gene Mappings Version 5 |
TransMap Ensembl |
| TransMap Ensembl and GENCODE Mappings Version 5 |
UniProt |
| UniProt SwissProt/TrEMBL Protein Annotations |
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Green monkey ESTs |
| Green monkey ESTs Including Unspliced |
Green monkey mRNAs |
| Green monkey mRNAs from GenBank |
Spliced ESTs |
| Green monkey ESTs That Have Been Spliced |
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CpG Islands |
| CpG Islands (Islands < 300 Bases are Light Green) |
Unmasked CpG |
| CpG Islands on All Sequence (Islands < 300 Bases are Light Green) |
CpG Islands |
| CpG Islands (Islands < 300 Bases are Light Green) |
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Tarsier Chain/Net |
| Tarsier (Sep. 2013 (Tarsius_syrichta-2.0.1/tarSyr2)), Chain and Net Alignments |
Human Chain/Net |
| Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments |
Rhesus Chain/Net |
| Rhesus (Nov. 2015 (BCM Mmul_8.0.1/rheMac8)), Chain and Net Alignments |
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RepeatMasker |
| Repeating Elements by RepeatMasker |
new
EVA SNP |
| Short Genetic Variants from European Variant Archive |
Interrupted Rpts |
| Fragments of Interrupted Repeats Joined by RepeatMasker ID |
Microsatellite |
| Microsatellites - Di-nucleotide and Tri-nucleotide Repeats |
Simple Repeats |
| Simple Tandem Repeats by TRF |
WM + SDust |
| Genomic Intervals Masked by WindowMasker + SDust |
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