Description
This track shows the primers for the
NEB VarSkip v1 and v2 sequencing primers.
Display Conventions and Configuration
Genomic locations of primers are highlighted. For primer tracks, the
"full" visibility mode is often more suitable than the "pack" or "squish" display modes.
Methods
Primer sequences were downloaded from the
NEB GitHub repository and converted to bigBed.
Data Access
The raw data can be explored interactively with the
Table Browser or combined with other datasets in the
Data Integrator tool.
For automated analysis, the genome annotation is stored in
a bigBed file that can be downloaded from
the download server.
Annotations can
be converted from binary to ASCII text by our command-line tool bigBedToBed.
Instructions for downloading this command can be found on our
utilities page.
The tool can also be used to obtain features within a given range without downloading the file,
for example:
bigBedToBed http://hgdownload.soe.ucsc.edu/gbdb/wuhCor1/bbi/artic.bb -chrom=NC_045512v2 -start=0 -end=29902 stdout
Please refer to our
mailing list archives
for questions, or our
Data Access FAQ
for more information.
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