Assay Summary H3K14ac Summary Track Settings
 
Roadmap Epigenome H3K14ac Summary

Track collection: Assay Summary

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+  All tracks in this collection (37)

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     ENCFF039OJF_trophoblast_cell  ENCFF039OJF trophoblast_cell by ChIP-seq    Data format 
     ENCFF070GHX_mesenchymal_stem_cell  ENCFF070GHX mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF079HBG_H9  ENCFF079HBG H9 by ChIP-seq    Data format 
     ENCFF083YMZ_trophoblast_cell  ENCFF083YMZ trophoblast_cell by ChIP-seq    Data format 
     ENCFF096ORW_IMR-90  ENCFF096ORW IMR-90 by ChIP-seq    Data format 
     ENCFF141YQL_H9  ENCFF141YQL H9 by ChIP-seq    Data format 
     ENCFF154BYZ_IMR-90  ENCFF154BYZ IMR-90 by ChIP-seq    Data format 
     ENCFF154LGW_H9  ENCFF154LGW H9 by ChIP-seq    Data format 
     ENCFF166PSF_trophoblast_cell  ENCFF166PSF trophoblast_cell by ChIP-seq    Data format 
     ENCFF183WCI_neuronal_stem_cell  ENCFF183WCI neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF206KDK_IMR-90  ENCFF206KDK IMR-90 by ChIP-seq    Data format 
     ENCFF210UNE_H1  ENCFF210UNE H1 by ChIP-seq    Data format 
     ENCFF292JZH_trophoblast_cell  ENCFF292JZH trophoblast_cell by ChIP-seq    Data format 
     ENCFF303RFO_H9  ENCFF303RFO H9 by ChIP-seq    Data format 
     ENCFF361LHT_IMR-90  ENCFF361LHT IMR-90 by ChIP-seq    Data format 
     ENCFF368RJQ_H9  ENCFF368RJQ H9 by ChIP-seq    Data format 
     ENCFF375XLU_mesenchymal_stem_cell  ENCFF375XLU mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF394VNN_H1  ENCFF394VNN H1 by ChIP-seq    Data format 
     ENCFF399GPT_mesenchymal_stem_cell  ENCFF399GPT mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF417BPL_trophoblast_cell  ENCFF417BPL trophoblast_cell by ChIP-seq    Data format 
     ENCFF421OWQ_trophoblast_cell  ENCFF421OWQ trophoblast_cell by ChIP-seq    Data format 
     ENCFF433IUT_mesenchymal_stem_cell  ENCFF433IUT mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF439AAR_H9  ENCFF439AAR H9 by ChIP-seq    Data format 
     ENCFF441CQJ_mesenchymal_stem_cell  ENCFF441CQJ mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF447PBU_trophoblast_cell  ENCFF447PBU trophoblast_cell by ChIP-seq    Data format 
     ENCFF456EBZ_trophoblast_cell  ENCFF456EBZ trophoblast_cell by ChIP-seq    Data format 
     ENCFF475YQU_H1  ENCFF475YQU H1 by ChIP-seq    Data format 
     ENCFF481UCN_IMR-90  ENCFF481UCN IMR-90 by ChIP-seq    Data format 
     ENCFF500SQQ_trophoblast_cell  ENCFF500SQQ trophoblast_cell by ChIP-seq    Data format 
     ENCFF505KQH_H9  ENCFF505KQH H9 by ChIP-seq    Data format 
     ENCFF536HFA_IMR-90  ENCFF536HFA IMR-90 by ChIP-seq    Data format 
     ENCFF537JTV_neuronal_stem_cell  ENCFF537JTV neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF537MEP_neuronal_stem_cell  ENCFF537MEP neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF554QBR_H9  ENCFF554QBR H9 by ChIP-seq    Data format 
     ENCFF576DIZ_IMR-90  ENCFF576DIZ IMR-90 by ChIP-seq    Data format 
     ENCFF579GZB_H9  ENCFF579GZB H9 by ChIP-seq    Data format 
     ENCFF587XQO_mesenchymal_stem_cell  ENCFF587XQO mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF605ROH_H1  ENCFF605ROH H1 by ChIP-seq    Data format 
     ENCFF622RIH_H9  ENCFF622RIH H9 by ChIP-seq    Data format 
     ENCFF639RDT_H1  ENCFF639RDT H1 by ChIP-seq    Data format 
     ENCFF657PYB_IMR-90  ENCFF657PYB IMR-90 by ChIP-seq    Data format 
     ENCFF697IDN_IMR-90  ENCFF697IDN IMR-90 by ChIP-seq    Data format 
     ENCFF699UVV_H1  ENCFF699UVV H1 by ChIP-seq    Data format 
     ENCFF767OET_mesenchymal_stem_cell  ENCFF767OET mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF772FUT_trophoblast_cell  ENCFF772FUT trophoblast_cell by ChIP-seq    Data format 
     ENCFF773BNS_trophoblast_cell  ENCFF773BNS trophoblast_cell by ChIP-seq    Data format 
     ENCFF779IOI_H1  ENCFF779IOI H1 by ChIP-seq    Data format 
     ENCFF788KJE_IMR-90  ENCFF788KJE IMR-90 by ChIP-seq    Data format 
     ENCFF809NBO_H1  ENCFF809NBO H1 by ChIP-seq    Data format 
     ENCFF810DIP_H1  ENCFF810DIP H1 by ChIP-seq    Data format 
     ENCFF848ZYU_IMR-90  ENCFF848ZYU IMR-90 by ChIP-seq    Data format 
     ENCFF855VIW_H9  ENCFF855VIW H9 by ChIP-seq    Data format 
     ENCFF916QOI_neuronal_stem_cell  ENCFF916QOI neuronal_stem_cell by ChIP-seq    Data format 
     ENCFF924IBF_IMR-90  ENCFF924IBF IMR-90 by ChIP-seq    Data format 
     ENCFF924OWB_H9  ENCFF924OWB H9 by ChIP-seq    Data format 
     ENCFF941RDV_H1  ENCFF941RDV H1 by ChIP-seq    Data format 
     ENCFF983XBZ_H1  ENCFF983XBZ H1 by ChIP-seq    Data format 
     ENCFF987THO_mesenchymal_stem_cell  ENCFF987THO mesenchymal_stem_cell by ChIP-seq    Data format 
     ENCFF998MFB_H1  ENCFF998MFB H1 by ChIP-seq    Data format 
    
Metadata:
Assay:ChIP-seq
OutputType:fold_change_over_control
Sample:trophoblast_cell
genome:hg38
Data schema/format description and download
Assembly: Human Dec. 2013 (GRCh38/hg38)

Vizhub @ Wash U built this track, and Roadmap Epigenomics Consortium is responsible for its contents.

Description

The track files were processed and hosted by ENCODE project.

This track displays the genomic maps based on the assay type. Data were generated using various assay methods across many different sample types for the Roadmap project.

Display conventions

This track displays read density data in form of wiggle plots. Number of aligned reads is counted at each base pair, and a summarized value is computed for each 20 bp interval for display. The subtracks can be displayed and configured individually. See instructions .

Methods

Experimental protocols:

Protocols are located at the bottom of each experiment page. The list of the experiments can be found here: ChIP-seq   polyA plus RNA-seq   microRNA-seq   small RNA-seq   total RNA-seq   DNase   WGBS .

Pipeline overview: follow this link for pipeline overview.

Credits

These data were generated in the following labs which are listed in alphabetical order:

Bing Ren, UCSD
Bradley Bernstein, Broad Institute
Joe Ecker Lab, Salk Institute for Biological Studies
John Stamatoyannopoulos Lab, University of Washington
Joseph Costello, UCSF