UCSC C. elegans Gene Sorter

JavaScript is disabled in your web browser

You must have JavaScript enabled in your web browser to use the Genome Browser

UCSC C. elegans Gene Sorter

genome assembly search

sort by display output

#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	ZK185.1	ZK185.1	0	chrIV 4,550,393	contains similarity to Interpro domain IPR015880 (Zinc finger, C2H2-like)
2	K08D10.11	K08D10.11	n/a	chrIV 4,185,528
3	Y44A6D.1	Y44A6D.1	n/a	chrV 20,782,907	contains similarity to Escherichia coli TraT.; TR:Q7WUD7
4	ZK1010.4	ZK1010.4	n/a	chrIII 12,982,581	contains similarity to Pfam domain PF01682 DB module contains similarity to Interpro domain IPR002602 (Protein of unknown function DB)
5	R07E5.11	R07E5.11	n/a	chrIII 4,415,004	contains similarity to Salmonella typhimurium Putative surface-exposed virulence protein bigA precursor.; SW:BIGA_SALTY
6	Y75B8A.32	Y75B8A.32	n/a	chrIII 12,356,632	contains similarity to Danio rerio PERQ amino acid-rich with GYF domain-containing protein 2s(Trinucleotide repeat-containing gene 15 protein).; SW:Q4KME6
7	T05A8.3	T05A8.3	n/a	chrII 2,716,038
8	F48C1.3	F48C1.3	n/a	chrI 5,314,472
9	T06E8.2	T06E8.2	n/a	chrV 10,036,032
10	W02A2.5	W02A2.5	n/a	chrIV 13,344,491	contains similarity to Interpro domains IPR000589 (Ribosomal protein S15), IPR015683 (Glutamate receptor-related), IPR001508 (NMDA receptor)
11	T23D5.3	T23D5.3	n/a	chrV 15,733,239	contains similarity to Pfam domain PF03436 Domain of unknown function (DUF281) contains similarity to Interpro domains IPR000104 (Antifreeze protein, type I), IPR001859 (Ribosomal protein P2), IPR005098 (Protein of unknown function DUF281)
12	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
13	C56E6.4	C56E6.4	n/a	chrII 6,527,652	contains similarity to Pfam domain PF03607 Doublecortin contains similarity to Interpro domain IPR003533 (Doublecortin)
14	C30E1.2	C30E1.2	n/a	chrX 16,927,410
15	srg-59	C24B9.7	n/a	chrV 2,724,113	C. elegans SRG-59 protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
16	sri-9	Y102A5C.29	n/a	chrV 17,002,496	C. elegans SRI-9 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR000565 (DNA topoisomerase, type IIA, subunit B)
17	R06B9.2	R06B9.2	n/a	chrII 13,767,269	contains similarity to Pfam domain PF00339 Arrestin (or S-antigen), N-terminal domain contains similarity to Interpro domains IPR014756 (Immunoglobulin E-set), IPR011021 (Arrestin-like, N-terminal)
18	srd-41	F17A2.6	n/a	chrX 12,327,467	C. elegans SRD-41 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR003006 (Immunoglobulin/major histocompatibility complex, conserved site)
19	B0284.3	B0284.3	n/a	chrIII 4,380,175	contains similarity to Interpro domain IPR000215 (Protease inhibitor I4, serpin)
20	bath-23	Y49F6C.5	n/a	chrII 3,371,722	C. elegans BATH-23 protein; contains similarity to Pfam domains PF00651 (BTB/POZ domain) , PF00917 (MATH domain) contains similarity to Interpro domains IPR002083 (MATH), IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ)
21	F52D2.5	F52D2.5	n/a	chrX 1,974,154
22	K09C6.3	K09C6.3	n/a	chrV 852,829
23	R12B2.3	R12B2.3	n/a	chrIII 5,806,220
24	srh-99	C46E10.7	n/a	chrII 3,715,771	C. elegans SRH-99 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
25	C18E9.10	C18E9.10	n/a	chrII 8,959,611	contains similarity to Pfam domain PF07770 SFT2-like protein contains similarity to Interpro domain IPR011691 (SFT2-like)
26	str-238	R09E12.4	n/a	chrV 768,810	C. elegans STR-238 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
27	Y113G7A.14	Y113G7A.14	n/a	chrV 20,132,595	contains similarity to Lumpy skin disease virus LSDV134 variola virus B22R-like protein.; TR:Q91MN0
28	C48A7.2	C48A7.2	n/a	chrIV 7,395,373	contains similarity to Pfam domain PF01384 Phosphate transporter family contains similarity to Interpro domains IPR000804 (Clathrin adaptor, sigma subunit/coatomer, zeta subunit), IPR001204 (Phosphate transporter)
29	F59H6.6	F59H6.6	n/a	chrII 2,011,980	contains similarity to Interpro domain IPR009057 (Homeodomain-like)
30	Y116A8C.11	Y116A8C.11	n/a	chrIV 16,989,256	contains similarity to Streptococcus pyogenes serotype M5 M protein, serotype 5 precursor.; SW:P02977
31	F21C10.1	F21C10.1	n/a	chrV 9,132,804	contains similarity to Pfam domain PF01705 CX module contains similarity to Interpro domain IPR002619 (Protein of unknown function CX)
32	F46E10.3	F46E10.3	n/a	chrV 6,519,002	contains similarity to Pfam domain PF07735 F-box associated contains similarity to Interpro domain IPR012885 (F-box associated type 2)
33	srw-139	C44C3.7	n/a	chrV 2,984,742	C. elegans SRW-139 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
34	str-71	T23F1.4	n/a	chrV 15,458,547	C. elegans STR-71 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
35	C05D9.4	C05D9.4	n/a	chrX 1,108,239
36	T11F1.8	T11F1.8	n/a	chrII 2,952,479	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
37	Y116A8C.9	Y116A8C.9	n/a	chrIV 16,943,608	contains similarity to Danio rerio Transmembrane protein 185-like.; SW:Q7SYC7
38	C04B4.6	C04B4.6	n/a	chrX 12,275,348	contains similarity to Corynebacterium efficiens Putative alanyl-tRNA synthetase.; TR:Q8FT23
39	F37C4.7	F37C4.7	n/a	chrIV 3,878,770
40	H04D03.3	H04D03.3	n/a	chrIII 10,443,934	contains similarity to Interpro domain IPR016024 (Armadillo-type fold)
41	Y54C5A.1	Y54C5A.1	n/a	chrII 4,140,997
42	srx-119	F49C5.1	n/a	chrII 12,528,893	C. elegans SRX-119 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
43	T02H6.10	T02H6.10	n/a	chrII 680,250
44	clec-213	C50E3.3	n/a	chrV 7,606,857	C. elegans CLEC-213 protein; contains similarity to Interpro domain IPR016187 (C-type lectin fold)
45	Y48E1B.7	Y48E1B.7	n/a	chrII 13,580,236	Y48E1B.7 encodes a C2H2-type zinc-finger protein required for embryonic development and fertility; Y48E1B.7 transcript levels are diminished by ERI-1, RDE-3, and RRF-2, perhaps through endogenous RNAi; Y48E1B.7 is paralogous to MCD-1, but has no obvious non-nematode orthologs; Y48E1B.7 contains a single central zinc-finger and a C-terminal low-complexity region, but no other recognizable protein domains.
46	str-198	ZK285.1	n/a	chrV 16,048,450	C. elegans STR-198 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
47	ZC132.4	ZC132.4	n/a	chrV 4,302,829	contains similarity to Uukuniemi virus Envelope glycoprotein precursor (GP) (M polyprotein) [Contains:sGlycoprotein G1; Glycoprotein G2].; SW:P09613
48	C33E10.8	C33E10.8	n/a	chrX 17,293,743	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
49	F28B1.5	F28B1.5	n/a	chrV 17,058,496
50	srd-21	W06G6.3	n/a	chrV 16,630,499	C. elegans SRD-21 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)