UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	ZC53.4	ZC53.4	0	chrX 1,931,714	contains similarity to Tetrahymena thermophila SB210 Putative uncharacterized protein.; TR:Q227Y0
2	EGAP2.2	EGAP2.2	n/a	chrII 5,230,269
3	Y76A2B.2	Y76A2B.2	n/a	chrIII 13,533,575	contains similarity to Homo sapiens Reticulon-4 receptor precursor; ENSEMBL:ENSP00000043402
4	srg-5	T12A2.11	n/a	chrIII 6,263,078	C. elegans SRG-5 protein; contains similarity to Pfam domain PF02118 C.elegans Srg family integral membrane protein contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
5	srw-76	W06G6.6	n/a	chrV 16,637,565	C. elegans SRW-76 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
6	F16G10.4	F16G10.4	n/a	chrII 2,369,673	contains similarity to Pfam domain PF02343 Domain of unknown function DUF130 contains similarity to Interpro domains IPR003326 (Protein of unknown function DUF130), IPR002371 (Flagellar hook-associated protein)
7	K09B11.4	K09B11.4	n/a	chrIV 13,429,722	contains similarity to Patella vulgata Twist protein (Fragment).; TR:Q8WQQ8
8	C11H1.2	C11H1.2	n/a	chrX 14,306,277	contains similarity to Interpro domain IPR015672 (G-protein coupled receptor 89-related)
9	F19B10.1	F19B10.1	n/a	chrII 3,683,855	contains similarity to Gallus gallus Neurofilament medium polypeptide (NF-M) (Neurofilament triplet Msprotein) (160 kDa neurofilament protein).; SW:P16053
10	B0205.5	B0205.5	n/a	chrI 10,740,393
11	fut-2	EGAP9.2	n/a	chrV 6,574,873	fut-2 encodes a unique alpha 1,2-fucosyltransferase specifically expressed in intestinal cells of larval and adult animals; recombinant FUT-2 expressed in human 293T cells exhibits a novel acceptor specificity profile compared with mammalian alpha 1,2-fucosyltransferases and the predicted protein shares very low amino acid identity with human alpha 1,2-fucosyltransferases, but its predicted type 2 topology and domain structure are typical of other glucosyltransferases.
12	Y51B9A.6	Y51B9A.6	n/a	chrII 9,401,875	contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domains IPR007114 (Major facilitator superfamily), IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
13	nhr-241	Y69H2.8	n/a	chrV 18,700,186	C. elegans NHR-241 protein
14	D1086.1	D1086.1	n/a	chrV 14,099,606	contains similarity to Pfam domain PF01579 Domain of unknown function DUF19 contains similarity to Interpro domains IPR016638 (Uncharacterised conserved protein UPF0376), IPR002542 (Protein of unknown function DUF19)
15	K07D4.4	K07D4.4	n/a	chrII 4,032,008
16	srj-1	ZK829.8	n/a	chrIV 11,964,638	C. elegans SRJ-1 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
17	sru-19	T04A11.8	n/a	chrIV 12,499,445	C. elegans SRU-19 protein; contains similarity to Pfam domain PF02688 Domain of unknown function DUF215 contains similarity to Interpro domain IPR003839 (Protein of unknown function DUF215)
18	srx-120	F49C5.2	n/a	chrII 12,532,032	C. elegans SRX-120 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
19	C09G9.3	C09G9.3	n/a	chrIV 8,871,534	contains similarity to Pfam domain PF01681 C6 domain contains similarity to Interpro domain IPR002601 (Protein of unknown function C6)
20	fbxb-59	Y113G7B.8	n/a	chrV 20,200,762	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
21	C02E7.8	C02E7.8	n/a	chrV 4,920,552
22	C37E2.3	C37E2.3	n/a	chrX 14,180,268	contains similarity to Pfam domain PF04750 FAR-17a/AIG1-like protein contains similarity to Interpro domains IPR006838 (FAR-17a/AIG1-like protein), IPR002208 (SecY protein)
23	Y45F10D.10	Y45F10D.10	n/a	chrIV 13,786,277	contains similarity to Pseudotylosurus angusticeps Recombination-activating protein 2 (Fragment).; TR:Q9DD51
24	srd-21	W06G6.3	n/a	chrV 16,630,499	C. elegans SRD-21 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
25	C10G11.6	C10G11.6	n/a	chrI 6,291,932
26	str-83	B0213.7	n/a	chrV 3,978,022	C. elegans STR-83 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR000344 (Nematode chemoreceptor, Sra), IPR003002 (7TM chemoreceptor, subfamily 1)
27	srt-30	R08F11.2	n/a	chrV 3,799,527	C. elegans SRT-30 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR002651 (Protein of unknown function DUF32), IPR001991 (Sodium:dicarboxylate symporter)
28	F39F10.5	F39F10.5	n/a	chrX 16,913,317
29	Y116A8C.15	Y116A8C.15	n/a	chrIV 16,996,337	contains similarity to Homo sapiens similar to KIAA1357 protein; ENSEMBL:ENSP00000258005
30	H01M10.2	H01M10.2	n/a	chrX 2,585,134	contains similarity to Interpro domain IPR006220 (Anthranilate synthase component II/delta crystallin)
31	F47B10.4	F47B10.4	n/a	chrX 10,891,428	contains similarity to Cyanophage P60 Thioredoxin C3.; TR:Q8W710
32	C35D6.3	C35D6.3	n/a	chrIV 16,347,259	contains similarity to Interpro domain IPR003100 (Argonaute and Dicer protein, PAZ)
33	F10E7.2	F10E7.2	n/a	chrII 7,123,253	contains similarity to Schistocerca gregaria Homeobox protein abdominal-A homolog (Fragment).; SW:P29556
34	srd-56	E04F6.14	n/a	chrII 7,202,553	C. elegans SRD-56 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
35	F15D3.9	F15D3.9	n/a	chrI 11,558,305
36	apc-11	F35G12.9	n/a	chrIII 4,594,070	apc-11 encodes a predicted key catalytic subunit of the anaphase promoting complex that is required for embryonic development past the embryonic one- cell stage.
37	D1007.9	D1007.9	n/a	chrI 4,591,009
38	F45F2.7	F45F2.7	n/a	chrV 8,523,135	contains similarity to Pfam domain PF03189 Protein of unknown function, DUF270 contains similarity to Interpro domains IPR003945 (NADH-plastoquinone oxidoreductase, chain 5), IPR004878 (Protein of unknown function DUF270), IPR016196 (MFS general substrate transporter)
39	srz-78	C09G12.3	n/a	chrIV 3,492,493	C. elegans SRZ-78 protein ;
40	C11G6.3	C11G6.3	n/a	chrX 16,343,288	contains similarity to Pfam domain PF00628 PHD-finger contains similarity to Interpro domains IPR001965 (Zinc finger, PHD-type), IPR000956 (Stathmin), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR003026 (Transcription factor Otx1, C-terminal), IPR000533 (Tropomyosin), IPR011011 (Zinc finger, FYVE/PHD-type)
41	C47F8.4	C47F8.4	n/a	chrI 12,317,914	contains similarity to Pfam domain PF03360 Glycosyltransferase family 43 contains similarity to Interpro domain IPR005027 (Glycosyl transferase, family 43)
42	T24D5.4	T24D5.4	n/a	chrX 12,597,224	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
43	R04B5.7	R04B5.7	n/a	chrV 10,089,830	contains similarity to Rattus norvegicus Protein tyrosine phosphatase TD14.; TR:O88902
44	srg-26	C10G8.1	n/a	chrV 5,332,145	C. elegans SRG-26 protein; contains similarity to Pfam domain PF02118 C.elegans Srg family integral membrane protein contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
45	W02B8.1	W02B8.1	n/a	chrII 13,900,226
46	clec-247	Y51A2A.1	n/a	chrV 18,285,606	C. elegans CLEC-247 protein; contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domains IPR002656 (Acyltransferase 3), IPR006621 (Nose resistant to fluoxetine-4, N-terminal)
47	srw-112	K12D9.9	n/a	chrV 3,005,101	C. elegans SRW-112 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
48	C17B7.10	C17B7.10	n/a	chrV 3,341,460	C17B7.10 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; C17B7.10 has no clear orthologs in other organisms.
49	tsg-101	C09G12.9	n/a	chrIV 3,512,510	C09G12.9 encodes the C. elegans ortholog of S. cerevisiae vacuolar protein sorting protein Vps23p and human TUMOR SUSCEPTIBILITY GENE 101 (TSG101; OMIM:601387), mutations in which are associated with several types of cancer and with varying responses to HIV infection; the product of C09G12.9 is predicted to be a component of C. elegans ESCRT-1 (Endosomal Sorting Complex Required for Transport), and RNAi experiments indicate that its activity is essential for embryonic and larval development.
50	R07A4.2	R07A4.2	n/a	chrX 10,745,349	contains similarity to Rhodopirellula baltica Probable serine/threonine-protein kinase pknB (EC 2.7.1.-).; TR:Q7UFE6