UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	ZC411.1	ZC411.1	0	chrV 8,878,230
2	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
3	C25A1.12	C25A1.12	n/a	chrI 10,192,090	contains similarity to Pfam domain PF00561 alpha/beta hydrolase fold contains similarity to Interpro domains IPR000073 (Alpha/beta hydrolase fold-1), IPR003089 (Alpha/beta hydrolase), IPR002410 (Peptidase S33, prolyl aminopeptidase)
4	srh-104	F21H7.7	n/a	chrV 16,243,471	C. elegans SRH-104 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
5	K09D9.12	K09D9.12	n/a	chrV 4,003,740
6	fbxa-171	C38D9.1	n/a	chrV 17,564,573	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
7	C15A7.2	C15A7.2	n/a	chrX 12,072,281	contains similarity to Xenopus laevis Transmembrane protein 145.; SW:Q5U239
8	gnrr-3	ZC374.1	n/a	chrX 10,050,904	C. elegans GNRR-3 protein; contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
9	srh-207	ZK262.1	n/a	chrV 18,409,607	C. elegans SRH-207 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
10	F46F5.8	F46F5.8	n/a	chrII 821,517
11	srx-134	F09F3.7	n/a	chrV 13,855,910	C. elegans SRX-134 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
12	set-24	Y43F11A.5	n/a	chrII 12,122,894	set-24 encodes a protein with an N-terminal SET domain, followed by two SPK domains; SET-24's domain organization resembles that of SET-5, but SET-24 has no known non-nematode orthologs or C. elegans paralogs; neither set-24(n4909) nor set-24(RNAi) have any obvious phenotypes.
13	ZK1240.5	ZK1240.5	n/a	chrII 2,317,121	contains similarity to Interpro domain IPR000315 (Zinc finger, B-box)
14	bath-33	C08E3.3	n/a	chrII 1,605,408	C. elegans BATH-33 protein; contains similarity to Pfam domains PF00917 (MATH domain) , PF00651 (BTB/POZ domain) contains similarity to Interpro domains IPR002083 (MATH), IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ)
15	sri-25	C41G6.10	n/a	chrV 15,218,422	C. elegans SRI-25 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
16	K02D7.5	K02D7.5	n/a	chrIV 309,359	contains similarity to Pfam domain PF03083 MtN3/saliva family contains similarity to Interpro domain IPR004316 (MtN3 and saliva related transmembrane protein)
17	C29G2.6	C29G2.6	n/a	chrV 2,584,386
18	srv-34	F13A7.3	n/a	chrV 16,373,569	C. elegans SRV-34 protein; contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000355 (Chemokine receptor)
19	T05A8.7	T05A8.7	n/a	chrII 2,741,328
20	H12I19.4	H12I19.4	n/a	chrIV 14,147,395	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domain IPR002656 (Acyltransferase 3)
21	srx-137	F09F3.13	n/a	chrV 13,863,436	C. elegans SRX-137 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR002651 (Protein of unknown function DUF32), IPR002229 (Blood group Rhesus C/E and D polypeptide), IPR000276 (GPCR, rhodopsin-like)
22	F54B11.5	F54B11.5	n/a	chrX 13,595,020	contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger) contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR011016 (Zinc finger, variant RING-type)
23	Y66A7A.2	Y66A7A.2	n/a	chrIII 11,486,326	Y66A7A.2 encodes an ortholog of Pop5, a protein subunit shared by the endoribonucleases RNase MRP and RNAse P; RNAse MRP cleaves mitochondrial RNA in mitochondrial DNA synthesis, nucleolar pre-rRNA in ribosome synthesis, and at least one mRNA (CLB2) involved in cell-cycle regulation; RNAse P cleaves tRNA precursors to produce their mature 5' end; Y66A7A.2 is evolutionarily ubiquitous among eukaryotes.
24	F56C3.1	F56C3.1	n/a	chrX 1,387,200
25	K10B4.1	K10B4.1	n/a	chrII 137,530	contains similarity to Pfam domain PF03098 Animal haem peroxidase contains similarity to Interpro domains IPR010255 (Haem peroxidase), IPR002007 (Haem peroxidase, animal)
26	F52G3.4	F52G3.4	n/a	chrX 16,950,151
27	T08G3.6	T08G3.6	n/a	chrV 16,446,543	contains similarity to Interpro domain IPR008975 ()
28	T27E4.5	T27E4.5	n/a	chrV 9,069,053	contains similarity to Pfam domain PF00095 WAP-type (Whey Acidic Protein) 'four-disulfide core' contains similarity to Interpro domain IPR008197 (Whey acidic protein, 4-disulphide core)
29	ZK430.5	ZK430.5	n/a	chrII 4,411,199	contains similarity to Pfam domain PF03568 Peptidase family C50 contains similarity to Interpro domain IPR005314 (Peptidase C50, separase)
30	mbr-1	T01C1.2	n/a	chrX 10,720,732	C. elegans MBR-1 protein; contains similarity to Pfam domain PF05225 helix-turn-helix, Psq domain contains similarity to Interpro domains IPR011526 (Helix-turn-helix, Psq-like), IPR007889 (Helix-turn-helix, Psq)
31	R05D7.3	R05D7.3	n/a	chrI 12,169,337	contains similarity to Interpro domain IPR000085 (Bacterial DNA recombination protein, RuvA)
32	srbc-59	R09E12.1	n/a	chrV 779,433	C. elegans SRBC-59 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
33	aat-4	T13A10.10	n/a	chrIV 6,274,136	aat-4 encodes a predicted amino acid transporter catalytic subunit; unlike catalytic subunits in other organisms, however, AAT-4 does not contain the highly conserved cysteine residue known to facilitate covalent interaction with a glycoprotein subunit, suggesting that AAT-4 does not require this residue for heterodimer formation or, alternatively, does not require the glycoprotein subunit for function.
34	F48G7.13	F48G7.13	n/a	chrV 615,813
35	str-211	C02E7.13	n/a	chrV 4,943,703	C. elegans STR-211 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
36	C53C7.3	C53C7.3	n/a	chrX 13,049,643	contains similarity to Triticum aestivum Alpha/beta-gliadin A-V precursor (Prolamin).; SW:GDA5_WHEAT
37	K07H8.5	K07H8.5	n/a	chrIV 8,272,091
38	F27E5.5	F27E5.5	n/a	chrII 10,129,961	contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
39	W04D2.5	W04D2.5	n/a	chrV 12,493,975	contains similarity to Pfam domain PF00411 Ribosomal protein S11 contains similarity to Interpro domain IPR001971 (Ribosomal protein S11)
40	sre-37	F15A4.3	n/a	chrII 12,466,610	C. elegans SRE-37 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
41	K03D10.3	K03D10.3	n/a	chrI 14,122,952	The K03D10.3 gene encodes a MYST acetyltransferase orthologous to the Drosophila MALES-ABSENT-ON-THE-FIRST (MOF) and CG1894 proteins, the human MOF protein, and the S. cerevisiae SAS2 protein.
42	T14F9.2	T14F9.2	n/a	chrX 2,235,334
43	H10E21.4	H10E21.4	n/a	chrIII 18,471	contains similarity to Pfam domain PF00036 EF hand contains similarity to Interpro domains IPR011992 (EF-Hand type), IPR002048 (Calcium-binding EF-hand), IPR008080 (Parvalbumin), IPR003299 (Flagellar calcium-binding protein (calflagin))
44	tbx-8	T07C4.2	n/a	chrIII 10,348,548	C. elegans TBX-8 protein; contains similarity to Pfam domain PF00907 T-box contains similarity to Interpro domains IPR008967 (p53-like transcription factor, DNA-binding), IPR000694 (Proline-rich region), IPR001699 (Transcription factor, T-box)
45	nhr-189	F47C10.8	n/a	chrV 3,859,413	C. elegans NHR-189 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
46	ZK112.6	ZK112.6	n/a	chrIII 7,740,126	contains similarity to Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA ligase) (Acyl-sactivating enzyme).; SW:Q72LY9
47	srh-200	F07C4.13	n/a	chrV 7,652,983	C. elegans SRH-200 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
48	R05C11.2	R05C11.2	n/a	chrIV 2,058,493	contains similarity to Pfam domain PF01827 FTH domain contains similarity to Interpro domain IPR002900 (Protein of unknown function DUF38, Caenorhabditis species)
49	F53C3.8	F53C3.8	n/a	chrII 3,891,751
50	Y116A8C.40	Y116A8C.40	n/a	chrIV 17,147,619	contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)