UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	Y75B8A.10	Y75B8A.10	2e-179	chrIII 12,181,866	contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR006662 (Thioredoxin-related)
2	F11D5.6	F11D5.6	n/a	chrX 3,325,709
3	clec-58	ZK666.3	n/a	chrII 10,475,101	C. elegans CLEC-58 protein; contains similarity to Pfam domain PF00092 von Willebrand factor type A domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin), IPR002035 (von Willebrand factor, type A)
4	acl-12	C01C10.3	n/a	chrX 7,440,941	C. elegans ACL-12 protein; contains similarity to Interpro domain IPR002123 (Phospholipid/glycerol acyltransferase)
5	srh-32	Y26G10.2	n/a	chrV 17,702,215	C. elegans SRH-32 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
6	kin-23	W04G5.6	n/a	chrI 11,641,436	kin-23 encodes a predicted protein tyrosine kinase; like KIN-30, KIN-23 contains an unusual K to R substitution in kinase subdomain VII; kin-23 mRNA is expressed strongly during the L1/L2 larval stages, weakly in L3 and L4 stages, and at undetectable levels in adults.
7	C03A7.13	C03A7.13	n/a	chrV 5,191,814	contains similarity to Interpro domains IPR002048 (Calcium-binding EF-hand), IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)
8	Y41E3.13	Y41E3.13	n/a	chrIV 15,058,268	contains similarity to Interpro domain IPR007985 (Haemolysin expression modulating)
9	F56F11.1	F56F11.1	n/a	chrIII 2,892,177
10	sri-37	D2062.2	n/a	chrII 2,630,401	C. elegans SRI-37 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
11	C31A11.1	C31A11.1	n/a	chrV 16,294,149	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domains IPR002656 (Acyltransferase 3), IPR006621 (Nose resistant to fluoxetine-4, N-terminal)
12	grl-8	ZC487.5	n/a	chrV 6,732,495	grl-8 encodes a hedgehog-like protein, with an N-terminal signal sequence and a C-terminal Ground-like (Grl) domain; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
13	Y26D4A.9	Y26D4A.9	n/a	chrI 13,088,824	contains similarity to Pfam domain PF03175 DNA polymerase type B, organellar and viral contains similarity to Interpro domains IPR000215 (Protease inhibitor I4, serpin), IPR004868 (DNA-directed DNA polymerase, family B, mitochondria/virus)
14	C17B7.3	C17B7.3	n/a	chrV 3,343,332	contains similarity to Pfam domain PF01579 Domain of unknown function DUF19 contains similarity to Interpro domains IPR016638 (Uncharacterised conserved protein UPF0376), IPR002542 (Protein of unknown function DUF19)
15	srbc-48	F54B8.6	n/a	chrV 15,820,807	C. elegans SRBC-48 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR002651 (Protein of unknown function DUF32)
16	srv-10	F53F1.9	n/a	chrV 13,424,568	C. elegans SRV-10 protein; contains similarity to Interpro domain IPR001411 (Tetracycline resistance protein, TetB)
17	B0034.2	B0034.2	n/a	chrII 5,944,245
18	C08D8.1	C08D8.1	n/a	chrV 8,347,824	contains similarity to Pfam domains PF07690 (Major Facilitator Superfamily) , PF05978 (Eukaryotic protein of unknown function (DUF895)) contains similarity to Interpro domains IPR010291 (Protein of unknown function DUF895, eukaryotic), IPR003567 (Cytochrome c-type biogenesis protein), IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
19	F38H12.5	F38H12.5	n/a	chrV 4,082,125	contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
20	R160.5	R160.5	n/a	chrX 4,370,650
21	C07H4.1	C07H4.1	n/a	chrII 9,091,587	contains similarity to Oceanobacillus iheyensis Hypothetical conserved protein.; TR:Q8ETI8
22	T02H6.5	T02H6.5	n/a	chrII 687,130	contains similarity to Pfam domains PF07735 (F-box associated) , PF00646 (F-box domain) contains similarity to Interpro domains IPR001810 (Cyclin-like F-box), IPR012885 (F-box associated type 2)
23	C49C3.15	C49C3.15	n/a	chrIV 17,334,573	contains similarity to Interpro domain IPR002101 (Myristoylated alanine-rich C-kinase substrate MARCKS)
24	C01G5.4	C01G5.4	n/a	chrIV 6,533,692	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domains IPR003125 (Protein of unknown function WSN), IPR001399 (VP6 blue-tongue virus inner capsid protein)
25	srsx-13	C13D9.6	n/a	chrV 4,982,486	C. elegans SRSX-13 protein; contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
26	K10C9.1	K10C9.1	n/a	chrV 1,077,400
27	sri-38	D2062.8	n/a	chrII 2,611,611	C. elegans SRI-38 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
28	srg-40	T19C4.4	n/a	chrV 11,163,867	C. elegans SRG-40 protein; contains similarity to Interpro domains IPR000500 (Connexins), IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
29	Y17D7B.2	Y17D7B.2	n/a	chrV 18,788,749	contains similarity to Xenopus laevis Phosphoinositide-3-kinase.; TR:Q8UUU2
30	nhr-252	ZK6.2	n/a	chrV 405,309	C. elegans NHR-252 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000679 (Zinc finger, GATA-type), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
31	C17B7.8	C17B7.8	n/a	chrV 3,322,428	C17B7.8 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; C17B7.8 has no clear orthologs in other organisms.
32	srw-23	F49A5.8	n/a	chrV 16,874,669	C. elegans SRW-23 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
33	W06G6.2	W06G6.2	n/a	chrV 16,629,439	contains similarity to Bombyx mori Hunchback protein (Fragment).; SW:HUNB_BOMMO
34	F35F10.13	F35F10.13	n/a	chrV 3,318,633	contains similarity to Pfam domain PF01579 Domain of unknown function DUF19 contains similarity to Interpro domains IPR016638 (Uncharacterised conserved protein UPF0376), IPR002542 (Protein of unknown function DUF19)
35	M162.6	M162.6	n/a	chrV 19,782,521	contains similarity to Interpro domain IPR016187 (C-type lectin fold)
36	srbc-79	B0250.6	n/a	chrV 20,487,016	C. elegans SRBC-79 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
37	K04F1.6	K04F1.6	n/a	chrV 1,671,713	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
38	F11F1.5	F11F1.5	n/a	chrIII 13,402,502	contains similarity to Pfam domain PF02520 Domain of unknown function DUF148 contains similarity to Interpro domains IPR003661 (Signal transduction histidine kinase, subgroup 1, dimerisation and phosphoacceptor region), IPR003677 (Protein of unknown function DUF148)
39	ZC487.2	ZC487.2	n/a	chrV 6,721,684
40	C34D1.1	C34D1.1	n/a	chrV 13,224,279	contains similarity to Pfam domain PF00751 (DM DNA binding domain)
41	W03G9.5	W03G9.5	n/a	chrI 4,969,127	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
42	C08E8.2	C08E8.2	n/a	chrV 18,354,641	contains similarity to Pfam domain PF03088 Strictosidine synthase contains similarity to Interpro domains IPR004141 (Strictosidine synthase), IPR011042 (Six-bladed beta-propeller, TolB-like)
43	K09C6.1	K09C6.1	n/a	chrV 860,591	contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core)
44	F40B5.1	F40B5.1	n/a	chrX 8,376,670	F40B5.1 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; F40B5.1 has no clear orthologs in other organisms.
45	Y12A6A.2	Y12A6A.2	n/a	chrX 13,619,323	contains similarity to Phaseolus lunatus Double-headed bowman-birk inhibitor (Fragment).; TR:Q941H3
46	tsp-18	F59G1.2	n/a	chrII 5,905,416	C. elegans TSP-18 protein; contains similarity to Interpro domain IPR008952 (Tetraspanin)
47	nhr-79	T26H2.9	n/a	chrV 19,209,750	C. elegans NHR-79 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
48	F35G8.1	F35G8.1	n/a	chrX 9,317,241	contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR005395 (Neuropeptide FF receptor), IPR000611 (Neuropeptide Y receptor), IPR000276 (GPCR, rhodopsin-like)
49	clec-45	F07C4.2	n/a	chrV 7,638,344	C. elegans CLEC-45 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
50	F42G2.5	F42G2.5	n/a	chrII 2,417,192	contains similarity to Pfam domains PF00635 (MSP (Major sperm protein) domain) , PF00097 (Zinc finger, C3HC4 type (RING finger)) contains similarity to Interpro domains IPR008962 (PapD-like), IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR000535 (Major sperm protein)