UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	Y6B3B.7	Y6B3B.7	2.0000000000000002e-76	chrI 13,748,017	contains similarity to Interpro domain IPR000345 (Cytochrome c heme-binding site)
2	C55B7.10	C55B7.10	n/a	chrI 6,502,907	contains similarity to Interpro domains IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core)
3	F19B6.3	F19B6.3	n/a	chrIV 12,327,905	contains similarity to Lactococcus lactis Unknown protein.; TR:Q9CF64
4	M195.4	M195.4	n/a	chrII 8,376,915	contains similarity to Homo sapiens Putative uncharacterized protein (Fragment); ENSEMBL:ENSP00000333119
5	kin-31	B0523.1	n/a	chrIII 8,672,572	kin-31 encodes a predicted tyrosine protein kinase expressed in the nucleus and cytoplasm of body-wall muscle cells; the expression of kin-31 was experimentally verified by RT-PCR.
6	R05D7.2	R05D7.2	n/a	chrI 12,166,865	contains similarity to Pfam domain PF04435 Domain of unknown function (DUF545) contains similarity to Interpro domain IPR006570 (SPK)
7	F21F8.5	F21F8.5	n/a	chrV 8,265,454
8	R05A10.7	R05A10.7	n/a	chrIV 14,161,499	contains similarity to Pfam domain PF07801 Protein of unknown function (DUF1647) contains similarity to Interpro domain IPR012444 (Protein of unknown function DUF1647)
9	R09E10.2	R09E10.2	n/a	chrIV 10,317,896	contains similarity to Pfam domain PF00102 (Protein-tyrosine phosphatase)
10	tsp-19	D2092.7	n/a	chrI 6,617,424	C. elegans TSP-19 protein; contains similarity to Interpro domain IPR001991 (Sodium:dicarboxylate symporter)
11	skr-9	C52D10.7	n/a	chrIV 17,163,837	skr-9 encodes a homolog of Skp1 in S. cerevisiae, a component of the SCF (Skp1, Cullin, F-box) ubiquitin-ligase complex that regulates ubiquitin-mediated protein degradation; SKR-9 is required for posterior body morphogenesis, embryonic and larval development, and postembryonic cell proliferation.
12	Y49A3A.4	Y49A3A.4	n/a	chrV 14,357,603	contains similarity to Pfam domain PF01549 ShK domain-like contains similarity to Interpro domain IPR003582 (Metridin-like ShK toxin)
13	F13H8.6	F13H8.6	n/a	chrII 6,285,852
14	Y113G7B.15	Y113G7B.15	n/a	chrV 20,226,741	contains similarity to Pfam domains PF08246 (Cathepsin propeptide inhibitor domain (I29)) , PF00112 (Papain family cysteine protease) contains similarity to Interpro domains IPR013128 (Peptidase C1A, papain), IPR000169 (Peptidase, cysteine peptidase active site), IPR013201 (Proteinase inhibitor I29, cathepsin propeptide), IPR000668 (Peptidase C1A, papain C-terminal)
15	C34G6.3	C34G6.3	n/a	chrI 5,897,020	contains similarity to Interpro domain IPR005819 (Histone H5)
16	C18H2.1	C18H2.1	n/a	chrIII 7,667,218	contains similarity to Pfam domains PF02206 (Domain of unknown function) (2), PF00023 (Ankyrin repeat) , PF00533 (BRCA1 C Terminus (BRCT) domain) (2)contains similarity to Interpro domains IPR002110 (Ankyrin), IPR003125 (Protein of unknown function WSN), IPR001357 (BRCT)
17	Y54E2A.5	Y54E2A.5	n/a	chrII 14,756,797
18	F58G1.9	F58G1.9	n/a	chrII 12,924,971	contains similarity to Homo sapiens Adapter-related protein complex 4 mu 1 subunit; SW:O00189
19	F28H1.5	F28H1.5	n/a	chrI 3,979,010
20	ZK418.6	ZK418.6	n/a	chrIII 7,076,490	contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000694 (Proline-rich region), IPR000276 (GPCR, rhodopsin-like)
21	W03D8.3	W03D8.3	n/a	chrI 2,821,478	contains similarity to Interpro domain IPR000694 (Proline-rich region)
22	Y41C4A.1	Y41C4A.1	n/a	chrIII 11,648,712	contains similarity to Oryza sativa Putative aspartate kinase.; TR:Q851Z6
23	K01D12.15	K01D12.15	n/a	chrV 12,386,487	contains similarity to Interpro domains IPR001859 (Ribosomal protein P2), IPR000976 (Wilm's tumour protein)
24	spe-19	Y113G7A.10	n/a	chrV 20,039,581	C. elegans SPE-19 protein ;
25	T19D2.3	T19D2.3	n/a	chrX 3,939,726
26	C25G4.7	C25G4.7	n/a	chrIV 12,457,730	contains similarity to Pfam domain PF06887 Protein of unknown function (DUF1265) contains similarity to Interpro domains IPR011333 (BTB/POZ fold), IPR009676 (Protein of unknown function DUF1265)
27	mps-3	T06A4.2	n/a	chrI 761,378	mps-3 encodes a single-pass transmembrane protein that is related to the vertebrate KCNE proteins, also known as MinK-related peptides (MiRPs) that associate with, and regulate, pore-forming ion channels; mps-1 is required for the normal function of several neurons and thus for normal body touch sensation, chemotaxis to select molecules, osmotic avoidance, and nose-touch; when coexpressed in tissue culture cells with C. elegans KVS-1, MPS-3 is able to alter the activity of this potassium-selective channel, suggesting that MPS-3 functions in vivo to regulate KVS-1 activity in neurons in which the two proteins are coexpressed; in addition, activity of MPS-2, MPS-3, and KVS-1 coexpressed in culture suggests that these three proteins can form a functional ternary complex that genetic analyses indicate likely plays a role in regulating responsiveness to sodium; MPS-3 reporter fusions are expressed in the ADF amphid sensory neuron, the PVC and PVN neurons, and two neurons in the anterior bulb of the pharynx.
28	F45C12.1	F45C12.1	n/a	chrII 1,740,047	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domains IPR000494 (EGF receptor, L domain), IPR007087 (Zinc finger, C2H2-type)
29	F19C7.5	F19C7.5	n/a	chrIV 4,596,309
30	R09B5.12	R09B5.12	n/a	chrV 1,455,855	contains similarity to Interpro domains IPR011583 (Chitinase II), IPR017853 (Glycoside hydrolase, catalytic core)
31	T06G6.4	T06G6.4	n/a	chrI 12,713,797	contains similarity to Arabidopsis thaliana Synaptonemal complex protein 1 (Synaptonemal complex central regionsprotein ZYP1a).; SW:Q9LME2
32	K05F1.1	K05F1.1	n/a	chrII 5,802,499	contains similarity to Pfam domain PF01666 DX module contains similarity to Interpro domain IPR002593 (Protein of unknown function DX)
33	W03B1.9	W03B1.9	n/a	chrIV 4,354,761	contains similarity to Interpro domain IPR000694 (Proline-rich region)
34	F25E5.7	F25E5.7	n/a	chrV 7,440,782	contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316) contains similarity to Interpro domains IPR001254 (Peptidase S1 and S6, chymotrypsin/Hap), IPR005514 (Protein of unknown function DUF316), IPR009003 (Peptidase, trypsin-like serine and cysteine)
35	srw-72	F20E11.6	n/a	chrV 17,467,788	C. elegans SRW-72 protein ;
36	sru-27	C38C3.2	n/a	chrV 1,500,054	C. elegans SRU-27 protein; contains similarity to Pfam domain PF02688 Domain of unknown function DUF215 contains similarity to Interpro domain IPR003839 (Protein of unknown function DUF215)
37	C32D5.4	C32D5.4	n/a	chrII 6,322,171
38	K06A4.6	K06A4.6	n/a	chrV 9,480,821	contains similarity to Saccharomyces cerevisiae Synaptojanin-like protein; SGD:YOR109W
39	lgc-42	Y39A3B.2	n/a	chrIII 2,000,367	C. elegans LGC-42 protein; contains similarity to Pfam domains PF02931 (Neurotransmitter-gated ion-channel ligand binding domain) , PF02932 (Neurotransmitter-gated ion-channel transmembrane region) contains similarity to Interpro domains IPR006028 (Gamma-aminobutyric acid A receptor), IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding), IPR006029 (Neurotransmitter-gated ion-channel transmembrane region)
40	R04B5.1	R04B5.1	n/a	chrV 10,078,069	contains similarity to Culex nigripalpus baculovirus Putative 33 kDa early protein (CUN014 similar to AcMNPV ORF92).; TR:Q99GP2
41	fbxa-223	ZC513.10	n/a	chrV 8,064,176	fbxa-223 encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; FBXA-223 also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
42	wht-9	Y49E10.9	n/a	chrIII 12,393,102	C. elegans WHT-9 protein; contains similarity to Pfam domains PF01061 (ABC-2 type transporter) , PF00005 (ABC transporter) contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR003593 (AAA+ ATPase, core), IPR013525 (ABC-2 type transporter)
43	R01H2.2	R01H2.2	n/a	chrIII 7,057,468	contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316) contains similarity to Interpro domains IPR005514 (Protein of unknown function DUF316), IPR009003 (Peptidase, trypsin-like serine and cysteine)
44	F36G9.15	F36G9.15	n/a	chrV 15,987,734	contains similarity to Pfam domain PF06678 Protein of unknown function (DUF1179) contains similarity to Interpro domain IPR009564 (Protein of unknown function DUF1179)
45	Y113G7B.11	Y113G7B.11	n/a	chrV 20,209,977	contains similarity to Naja atra Cardiotoxin 10 precursor.; TR:Q9W6W6
46	F20D6.1	F20D6.1	n/a	chrV 8,191,303	contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)
47	F14D7.1	F14D7.1	n/a	chrV 14,289,203	contains similarity to Pfam domain PF06887 Protein of unknown function (DUF1265) contains similarity to Interpro domain IPR009676 (Protein of unknown function DUF1265)
48	F28C10.4	F28C10.4	n/a	chrX 539,044
49	Y69H2.11	Y69H2.11	n/a	chrV 18,644,329	contains similarity to Pfam domains PF00008 (EGF-like domain) (6), PF00858 (Amiloride-sensitive sodium channel) contains similarity to Interpro domains IPR001438 (EGF-like, type 2), IPR000742 (EGF-like, type 3), IPR006209 (EGF-like), IPR006210 (EGF), IPR002049 (EGF-like, laminin), IPR001881 (EGF-like calcium-binding), IPR013032 (EGF-like region, conserved site), IPR001873 (Na+ channel, amiloride-sensitive)
50	try-6	F48A9.3	n/a	chrI 6,586,594	C. elegans TRY-6 protein; contains similarity to Pfam domains PF00089 (Trypsin) , PF03761 (Domain of unknown function (DUF316)) contains similarity to Interpro domains IPR001314 (Peptidase S1A, chymotrypsin), IPR001254 (Peptidase S1 and S6, chymotrypsin/Hap), IPR005514 (Protein of unknown function DUF316), IPR009003 (Peptidase, trypsin-like serine and cysteine)