UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	nhr-288	Y51A2B.3	1e-141	chrV 18,381,620	C. elegans NHR-288 protein; contains similarity to Pfam domain PF00104 Ligand-binding domain of nuclear hormone receptor contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
2	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
3	srw-109	ZK488.9	n/a	chrV 607,863	C. elegans SRW-109 protein; contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR008075 (Lipocalin-1 receptor)
4	srbc-25	F40D4.6	n/a	chrV 17,174,753	C. elegans SRBC-25 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
5	K01A11.1	K01A11.1	n/a	chrIII 3,429,872	contains similarity to Dictyostelium discoideum PAXILLIN-like protein.; TR:Q8MML5
6	srh-219	C06B8.6	n/a	chrV 15,496,906	C. elegans SRH-219 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
7	srh-139	F57E7.3	n/a	chrV 16,484,653	C. elegans SRH-139 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
8	LLC1.2	LLC1.2	n/a	chrIV 14,460,481	contains similarity to Pfam domain PF06879 Protein of unknown function (DUF1261) contains similarity to Interpro domain IPR009673 (Protein of unknown function DUF1261)
9	B0507.5	B0507.5	n/a	chrV 8,754,261
10	srv-36	F57G8.8	n/a	chrV 16,324,110	C. elegans SRV-36 protein ;
11	Y102A5C.27	Y102A5C.27	n/a	chrV 16,988,446	contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
12	C36C5.4	C36C5.4	n/a	chrV 3,167,003	contains similarity to Pfam domain PF01579 Domain of unknown function DUF19 contains similarity to Interpro domains IPR016638 (Uncharacterised conserved protein UPF0376), IPR002542 (Protein of unknown function DUF19)
13	scl-4	C39E9.1	n/a	chrIV 13,062,457	C. elegans SCL-4 protein; contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1 related), IPR000480 (Glutelin)
14	Y76A2B.2	Y76A2B.2	n/a	chrIII 13,533,575	contains similarity to Homo sapiens Reticulon-4 receptor precursor; ENSEMBL:ENSP00000043402
15	ZK84.4	ZK84.4	n/a	chrII 6,008,570
16	srsx-18	C04E6.2	n/a	chrV 5,923,404	C. elegans SRSX-18 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
17	R11A5.6	R11A5.6	n/a	chrI 7,867,741	contains similarity to Rattus norvegicus Aa2-141.; TR:Q7TP81
18	F49E11.8	F49E11.8	n/a	chrIV 13,055,531	contains similarity to Neisseria meningitidis Preprotein translocase SecA subunit.; TR:Q9JTK7
19	ZK643.7	ZK643.7	n/a	chrIII 8,925,977
20	ZC13.2	ZC13.2	n/a	chrX 881,854
21	fbxb-99	Y8A9A.5	n/a	chrII 3,792,968	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
22	srw-139	C44C3.7	n/a	chrV 2,984,742	C. elegans SRW-139 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
23	K02E7.11	K02E7.11	n/a	chrII 1,075,134
24	srd-47	F17A2.11	n/a	chrX 12,334,389	C. elegans SRD-47 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
25	sre-31	F57G9.1	n/a	chrII 12,407,787	C. elegans SRE-31 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domains IPR004151 (C. elegans Sre G protein-coupled chemoreceptor), IPR000366 (Fungal pheromone mating factor STE2 GPCR), IPR000293 (Channel forming colicin, C-terminal cytotoxic)
26	fbxa-53	F07G6.7	n/a	chrX 1,717,501	C. elegans FBXA-53 protein; contains similarity to Pfam domains PF01827 (FTH domain) , PF00646 (F-box domain) contains similarity to Interpro domains IPR002900 (Protein of unknown function DUF38, Caenorhabditis species), IPR001810 (Cyclin-like F-box)
27	ZK994.6	ZK994.6	n/a	chrV 8,503,564
28	asna-2	F47G3.2	n/a	chrX 2,383,478	C. elegans ASNA-2 protein; contains similarity to Pfam domain PF02374 Anion-transporting ATPase contains similarity to Interpro domain IPR003348 (Anion-transporting ATPase)
29	Y45G12C.10	Y45G12C.10	n/a	chrV 2,535,583	contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
30	srd-69	H04J21.2	n/a	chrIII 2,364,601	C. elegans SRD-69 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
31	F37E3.2	F37E3.2	n/a	chrI 6,427,369	contains similarity to Pfam domain PF00560 Leucine Rich Repeat contains similarity to Interpro domains IPR001611 (Leucine-rich repeat), IPR003591 (Leucine-rich repeat, typical subtype)
32	B0302.2	B0302.2	n/a	chrX 17,178,681
33	sre-30	F57G9.2	n/a	chrII 12,405,637	C. elegans SRE-30 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
34	clec-231	C29F3.4	n/a	chrV 15,350,031	C. elegans CLEC-231 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
35	C35D6.3	C35D6.3	n/a	chrIV 16,347,259	contains similarity to Interpro domain IPR003100 (Argonaute and Dicer protein, PAZ)
36	F27C1.13	F27C1.13	n/a	chrI 5,445,369	contains similarity to Pfam domain PF03607 Doublecortin contains similarity to Interpro domain IPR003533 (Doublecortin)
37	Y79H2A.2	Y79H2A.2	n/a	chrIII 12,029,742	contains similarity to Interpro domain IPR003091 (Voltage-dependent potassium channel)
38	fbxa-220	Y66A7A.1	n/a	chrIII 11,483,373	C. elegans FBXA-220 protein; contains similarity to Pfam domain PF01827 FTH domain contains similarity to Interpro domain IPR002900 (Protein of unknown function DUF38, Caenorhabditis species)
39	F48G7.9	F48G7.9	n/a	chrV 628,338	contains similarity to Pfam domain PF00130 Phorbol esters/diacylglycerol binding domain (C1 domain) contains similarity to Interpro domains IPR015727 (Protein kinase C mu-related), IPR002219 (Protein kinase C, phorbol ester/diacylglycerol binding)
40	C29F9.1	C29F9.1	n/a	chrIII 133,396
41	C09H5.1	C09H5.1	n/a	chrV 8,082,547
42	T02G6.1	T02G6.1	n/a	chrI 11,796,907	contains similarity to Plasmodium falciparum Hypothetical protein.; TR:Q8I4U4
43	F47B10.4	F47B10.4	n/a	chrX 10,891,428	contains similarity to Cyanophage P60 Thioredoxin C3.; TR:Q8W710
44	F46E10.3	F46E10.3	n/a	chrV 6,519,002	contains similarity to Pfam domain PF07735 F-box associated contains similarity to Interpro domain IPR012885 (F-box associated type 2)
45	D1086.1	D1086.1	n/a	chrV 14,099,606	contains similarity to Pfam domain PF01579 Domain of unknown function DUF19 contains similarity to Interpro domains IPR016638 (Uncharacterised conserved protein UPF0376), IPR002542 (Protein of unknown function DUF19)
46	clec-120	F29A7.7	n/a	chrII 2,756,519	C. elegans CLEC-120 protein; contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domains IPR006583 (CW), IPR016187 (C-type lectin fold)
47	magi-1	K01A6.2	n/a	chrIV 11,721,610	C. elegans MAGI-1 protein; contains similarity to Pfam domains PF00595 (PDZ domain (Also known as DHR or GLGF)) (4), PF00397 (WW domain) (2), PF00625 (Guanylate kinase) contains similarity to Interpro domains IPR008144 (Guanylate kinase), IPR008145 (Guanylate kinase/L-type calcium channel region), IPR002349 (WW), IPR001478 (PDZ/DHR/GLGF), IPR001202 (WW/Rsp5/WWP)
48	ceh-16	C13G5.1	n/a	chrIII 8,624,237	ceh-16 encodes a homeodomain protein orthologous to Drosophila and vertebrate Engrailed proteins involved in segment and appendage development; ceh-16 is an essential gene required for proper specification and differentiation of the lateral seam cells during embryonic development; in specifying seam cell fates, CEH-16 appears to act as a transcriptional regulator, repressing expression of the eff-1 gene required for cell fusion and inducing expression of seam cell-specific genes such as elt-5/GATA, nhr-73, and nhr-74; a rescuing CEH-16::GFP fusion protein is first expressed in the early embryo in cells of the AB lineage; in later embryonic stages CEH-16::GFP is seen in all lateral seam cell nuclei as well as in some anterior neurons; during postembryonic development, CEH-16::GFP is expressed in the DA1 and DD1 motorneurons.
49	W04E12.3	W04E12.3	n/a	chrV 19,737,520	contains similarity to Bacillus subtilis Nuclease sbcCD subunit C.; SW:SBCC_BACSU
50	F56H6.11	F56H6.11	n/a	chrI 12,309,058	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domain IPR002656 (Acyltransferase 3)