UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	Y42A5A.3	Y42A5A.3	7.999999999999999e-63	chrV 11,095,685	contains similarity to Bacillus subtilis Hypothetical protein yhen.; TR:O07596
2	skr-9	C52D10.7	n/a	chrIV 17,163,837	skr-9 encodes a homolog of Skp1 in S. cerevisiae, a component of the SCF (Skp1, Cullin, F-box) ubiquitin-ligase complex that regulates ubiquitin-mediated protein degradation; SKR-9 is required for posterior body morphogenesis, embryonic and larval development, and postembryonic cell proliferation.
3	F21C10.4	F21C10.4	n/a	chrV 9,127,111	contains similarity to Pfam domain PF01705 CX module contains similarity to Interpro domain IPR002619 (Protein of unknown function CX)
4	F21D9.3	F21D9.3	n/a	chrV 19,257,632	contains similarity to Hepatitis B virus Large S protein (Major surface antigen).; TR:Q8JXA0
5	sru-23	F36G9.6	n/a	chrV 15,971,479	C. elegans SRU-23 protein; contains similarity to Pfam domain PF02688 Domain of unknown function DUF215 contains similarity to Interpro domains IPR003839 (Protein of unknown function DUF215), IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
6	djr-1.2	C49G7.11	n/a	chrV 4,054,635	C. elegans DJR-1.2 protein; contains similarity to Pfam domain PF01965 DJ-1/PfpI family contains similarity to Interpro domains IPR006287 (DJ-1), IPR002818 (ThiJ/PfpI)
7	C10C6.3	C10C6.3	n/a	chrIV 11,464,370	contains similarity to Saccharomyces cerevisiae Putative glycosidase of the cell wall, may have a role in cell wall architecture; SGD:YGR189C
8	ZK218.7	ZK218.7	n/a	chrV 17,106,188	contains similarity to Pfam domain PF01549 ShK domain-like contains similarity to Interpro domains IPR000104 (Antifreeze protein, type I), IPR000480 (Glutelin), IPR003582 (Metridin-like ShK toxin)
9	srx-20	R13H7.1	n/a	chrIV 6,868,598	C. elegans SRX-20 protein ;
10	dct-14	Y38H6C.3	n/a	chrV 20,495,572	C. elegans DCT-14 protein ; contains similarity to Rhizopus oryzae FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl cis-transsisomerase) (PPIase) (Rotamase).; SW:P0C1J6
11	R01B10.3	R01B10.3	n/a	chrV 6,044,828
12	C07A4.2	C07A4.2	n/a	chrX 10,173,174	contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR001283 (Allergen V5/Tpx-1 related)
13	C35A5.4	C35A5.4	n/a	chrV 10,498,176	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000694 (Proline-rich region), IPR000535 (Major sperm protein)
14	K12B6.8	K12B6.8	n/a	chrV 6,310,389	contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR001965 (Zinc finger, PHD-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR002219 (Protein kinase C, phorbol ester/diacylglycerol binding)
15	C03A7.12	C03A7.12	n/a	chrV 5,179,902	contains similarity to Pfam domain PF00201 UDP-glucoronosyl and UDP-glucosyl transferase contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)
16	nhr-282	F54B8.2	n/a	chrV 15,812,667	C. elegans NHR-282 protein; contains similarity to Pfam domain PF00104 Ligand-binding domain of nuclear hormone receptor contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
17	C34B2.3	C34B2.3	n/a	chrI 10,673,805	contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase)
18	C49C8.2	C49C8.2	n/a	chrIV 8,651,405
19	F26A10.1	F26A10.1	n/a	chrX 7,627,709
20	F45E1.4	F45E1.4	n/a	chrX 7,986,049
21	F15H10.5	F15H10.5	n/a	chrV 10,418,359	contains similarity to Borrelia burgdorferi Hypothetical protein BB0170.; TR:O51192
22	srr-5	C13D9.2	n/a	chrV 5,009,463	C. elegans SRR-5 protein; contains similarity to Pfam domain PF03268 Caenorhabditis protein of unknown function, DUF267 contains similarity to Interpro domains IPR004950 (Protein of unknown function DUF267, Caenorhabditis species), IPR000146 (Inositol phosphatase/fructose-1,6-bisphosphatase)
23	C02F12.5	C02F12.5	n/a	chrX 3,671,203	C02F12.5 encodes a putatively secreted protein with a Kunitz/bovine pancreatic trypsin inhibitor domain; C02F12.5 has no obvious function in mass RNAi assays.
24	K01D12.10	K01D12.10	n/a	chrV 12,406,600	contains similarity to Interpro domains IPR002952 (Eggshell protein), IPR003072 (Orphan nuclear receptor, NOR1 type), IPR003982 (Leukotriene B4 type 2 receptor)
25	F20D6.2	F20D6.2	n/a	chrV 8,186,659	contains similarity to Pfam domain PF01482 Domain of unknown function DUF13 contains similarity to Interpro domain IPR002485 (Protein of unknown function DUF13)
26	srr-7	T01G5.4	n/a	chrV 15,129,054	C. elegans SRR-7 protein; contains similarity to Pfam domain PF03268 Caenorhabditis protein of unknown function, DUF267 contains similarity to Interpro domain IPR004950 (Protein of unknown function DUF267, Caenorhabditis species)
27	M176.8	M176.8	n/a	chrII 9,437,409	contains similarity to Pfam domain PF00704 Glycosyl hydrolases family 18 contains similarity to Interpro domains IPR011583 (Chitinase II), IPR017853 (Glycoside hydrolase, catalytic core), IPR001223 (Glycoside hydrolase, family 18, catalytic domain), IPR013781 (Glycoside hydrolase, subgroup, catalytic core)
28	R04E5.9	R04E5.9	n/a	chrX 8,808,513	contains similarity to Homo sapiens Triadin; ENSEMBL:ENSP00000333984
29	F57C7.4	F57C7.4	n/a	chrX 10,585,230	contains similarity to Interpro domain IPR008972 ()
30	ZC196.3	ZC196.3	n/a	chrV 8,737,532	contains similarity to Pfam domain PF05218 Protein of unknown function (DUF713) contains similarity to Interpro domain IPR007883 (Protein of unknown function DUF713)
31	F46B3.9	F46B3.9	n/a	chrV 20,621,052	contains similarity to Interpro domain IPR003645 (Follistatin-like, N-terminal)
32	F59D6.7	F59D6.7	n/a	chrV 3,038,633	contains similarity to Pfam domain PF00036 EF hand contains similarity to Interpro domains IPR011992 (EF-Hand type), IPR002048 (Calcium-binding EF-hand), IPR008080 (Parvalbumin), IPR003299 (Flagellar calcium-binding protein (calflagin))
33	F27C1.10	F27C1.10	n/a	chrI 5,435,347
34	str-3	M7.13	n/a	chrIV 11,099,437	str-3 encodes a seven transmembrane chemosensory receptor; STR-3 is expressed in the ASI chemosensory neurons; STR-3 expression in ASI is repressed in the presence of dauer pheromone at concentrations lower than that which induces dauer formation.
35	Y43F8C.5	Y43F8C.5	n/a	chrV 19,631,978	contains similarity to Dictyostelium discoideum Myb-like protein (Fragment).; SW:MYBH_DICDI
36	C34D1.4	C34D1.4	n/a	chrV 13,258,178
37	srx-43	T10C6.3	n/a	chrV 16,018,889	C. elegans SRX-43 protein; contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
38	W08F4.5	W08F4.5	n/a	chrII 567,279
39	nnt-1	C15H9.1	n/a	chrX 6,124,888	nnt-1 encodes a proton-pumping nicotinamide nucleotide transhydrogenase predicted to be mitochondrial.
40	H25K10.2	H25K10.2	n/a	chrIV 16,210,717	contains similarity to Halobacterium sp ORF H0114.; TR:O51964
41	egl-38	C04G2.7	n/a	chrIV 10,108,695	The egl-38 gene encodes a Pax5 homolog.
42	K11D12.8	K11D12.8	n/a	chrV 5,040,194
43	F22E5.7	F22E5.7	n/a	chrII 2,642,443
44	F15E6.4	F15E6.4	n/a	chrIV 4,291,666
45	F25E2.3	F25E2.3	n/a	chrX 812,150	contains similarity to Pfam domain PF02551 Acyl-CoA thioesterase contains similarity to Interpro domain IPR003703 (Acyl-CoA thioesterase)
46	F35B3.3	F35B3.3	n/a	chrX 17,013,662
47	D1086.5	D1086.5	n/a	chrV 14,089,587	contains similarity to Bison bonasus MHC class II DR-beta chain (Fragment).; TR:O19256
48	Y62H9A.2	Y62H9A.2	n/a	chrX 11,877,730	contains similarity to Homo sapiens Angiomotin; ENSEMBL:ENSP00000305557
49	spp-9	T25C12.2	n/a	chrX 11,487,901	C. elegans SPP-9 protein; contains similarity to Pfam domain PF03489 Saposin-like type B, region 2 contains similarity to Interpro domains IPR008138 (Saposin-like type B, 2), IPR011001 (Saposin-like), IPR008139 (Saposin B)
50	T16A9.3	T16A9.3	n/a	chrV 14,208,326	contains similarity to Pfam domain PF06887 Protein of unknown function (DUF1265) contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR009676 (Protein of unknown function DUF1265)