UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	W06G6.2	W06G6.2	6e-45	chrV 16,629,439	contains similarity to Bombyx mori Hunchback protein (Fragment).; SW:HUNB_BOMMO
2	F15E6.9	F15E6.9	n/a	chrIV 4,296,304
3	srw-43	F14F8.5	n/a	chrV 16,686,204	C. elegans SRW-43 protein; contains similarity to Pfam domain PF06976 Protein of unknown function (DUF1300) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR010726 (Protein of unknown function DUF1300), IPR001991 (Sodium:dicarboxylate symporter), IPR000276 (GPCR, rhodopsin-like)
4	twk-14	K01D12.4	n/a	chrV 12,388,845	C. elegans TWK-14 protein; contains similarity to Pfam domain PF07885 Ion channel contains similarity to Interpro domains IPR003280 (Potassium channel, two pore-domain), IPR005410 (Potassium channel, two pore-domain, THIK), IPR013099 (Ion transport 2), IPR003092 (Potassium channel, two pore-domain, TASK)
5	T13C5.5	T13C5.5	n/a	chrX 6,203,287	n/a
6	F54H5.3	F54H5.3	n/a	chrII 6,622,759	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
7	nhr-252	ZK6.2	n/a	chrV 405,309	C. elegans NHR-252 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000679 (Zinc finger, GATA-type), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
8	F28A12.1	F28A12.1	n/a	chrV 8,639,396	contains similarity to Pfam domain PF00858 Amiloride-sensitive sodium channel contains similarity to Interpro domain IPR001873 (Na+ channel, amiloride-sensitive)
9	srab-16	R13D11.6	n/a	chrV 783,761	C. elegans SRAB-16 protein; contains similarity to Pfam domain PF02117 C.elegans Sra family integral membrane protein contains similarity to Interpro domain IPR000344 (Nematode chemoreceptor, Sra)
10	sre-41	Y57A10B.5	n/a	chrII 12,388,981	C. elegans SRE-41 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
11	str-151	T03E6.1	n/a	chrV 16,577,135	C. elegans STR-151 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
12	C50H2.6	C50H2.6	n/a	chrV 9,921,737	contains similarity to Pfam domain PF00501 AMP-binding enzyme contains similarity to Interpro domain IPR000873 (AMP-dependent synthetase and ligase)
13	sra-20	F28C12.4	n/a	chrI 12,697,375	C. elegans SRA-20 protein; contains similarity to Pfam domain PF02117 C.elegans Sra family integral membrane protein contains similarity to Interpro domain IPR000344 (Nematode chemoreceptor, Sra)
14	F41D9.1	F41D9.1	n/a	chrX 8,380,568	contains similarity to Pfam domains PF07653 (Variant SH3 domain) , PF00018 (SH3 domain) , PF00566 (TBC domain) , PF02759 (RUN domain) contains similarity to Interpro domains IPR000195 (RabGAP/TBC), IPR001452 (Src homology-3), IPR004012 (RUN), IPR013315 (Spectrin alpha chain), IPR011511 (Variant SH3)
15	sri-38	D2062.8	n/a	chrII 2,611,611	C. elegans SRI-38 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
16	F23A7.3	F23A7.3	n/a	chrX 16,221,101	contains similarity to Schizosaccharomyces pombe Endocytosis protein end4 (SLA2 protein homolog).; SW:Q9P6L5
17	C40A11.7	C40A11.7	n/a	chrII 2,149,559	contains similarity to Pfam domain PF02214 K+ channel tetramerisation domain contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation)
18	nhr-208	R07B7.15	n/a	chrV 12,095,111	C. elegans NHR-208 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
19	T05C1.1	T05C1.1	n/a	chrII 4,479,688
20	srw-23	F49A5.8	n/a	chrV 16,874,669	C. elegans SRW-23 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
21	srj-8	T28A11.9	n/a	chrV 3,248,476	C. elegans SRJ-8 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
22	K10C9.1	K10C9.1	n/a	chrV 1,077,400
23	F35F10.13	F35F10.13	n/a	chrV 3,318,633	contains similarity to Pfam domain PF01579 Domain of unknown function DUF19 contains similarity to Interpro domains IPR016638 (Uncharacterised conserved protein UPF0376), IPR002542 (Protein of unknown function DUF19)
24	nhr-113	ZK1025.9	n/a	chrI 11,474,430	nhr-113 encodes a nuclear receptor that is most highly conserved amongst nematode species.
25	T22E5.6	T22E5.6	n/a	chrX 6,415,238	contains similarity to Interpro domain IPR002016 (Haem peroxidase, plant/fungal/bacterial)
26	srsx-13	C13D9.6	n/a	chrV 4,982,486	C. elegans SRSX-13 protein; contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
27	nhr-79	T26H2.9	n/a	chrV 19,209,750	C. elegans NHR-79 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
28	Y62H9A.9	Y62H9A.9	n/a	chrX 11,896,785	contains similarity to Plasmodium falciparum Hypothetical protein.; TR:Q8I659
29	Y75B8A.10	Y75B8A.10	n/a	chrIII 12,181,866	contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR006662 (Thioredoxin-related)
30	B0034.2	B0034.2	n/a	chrII 5,944,245
31	B0496.5	B0496.5	n/a	chrIV 7,421,847	contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
32	C45E5.2	C45E5.2	n/a	chrIV 5,742,716	contains similarity to Pfam domain PF00704 Glycosyl hydrolases family 18 contains similarity to Interpro domains IPR011583 (Chitinase II), IPR017853 (Glycoside hydrolase, catalytic core), IPR001223 (Glycoside hydrolase, family 18, catalytic domain), IPR013781 (Glycoside hydrolase, subgroup, catalytic core)
33	F52E10.2	F52E10.2	n/a	chrX 16,282,921	contains similarity to Borrelia burgdorferi EppA.; TR:Q840B4
34	F59D6.6	F59D6.6	n/a	chrV 3,036,408	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
35	C31E10.4	C31E10.4	n/a	chrX 13,989,751
36	srbc-79	B0250.6	n/a	chrV 20,487,016	C. elegans SRBC-79 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
37	tsp-18	F59G1.2	n/a	chrII 5,905,416	C. elegans TSP-18 protein; contains similarity to Interpro domain IPR008952 (Tetraspanin)
38	ric-19	C32E8.7	n/a	chrI 3,779,897	The ric-19 gene encodes an evolutionarily conserved cytosolic protein involved in neuroendocrine secretion via association with secretory vesicles.
39	sri-20	AC3.1	n/a	chrV 10,369,184	C. elegans SRI-20 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
40	W07G1.1	W07G1.1	n/a	chrII 13,938,717	contains similarity to Pfam domain PF03607 Doublecortin contains similarity to Interpro domain IPR003533 (Doublecortin)
41	gly-14	M01F1.1	n/a	chrIII 3,491,809	gly-14 encodes a UDP-N-acetyl-D-glucosamine:alpha-3-D-mannoside beta-1, 2-N-acetylglucosaminyltransferase I (GnT 1); GLY-14 exhibits GnT 1 activity when assayed in vitro; a gly-14::lacZ reporter construct is expressed only in the intestine throughout larval and adult stages, with expression generally restricted to the anterior and posterior gut cells.
42	clec-46	F07C4.9	n/a	chrV 7,637,516	C. elegans CLEC-46 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
43	T04C9.2	T04C9.2	n/a	chrIII 5,992,002
44	C34D1.1	C34D1.1	n/a	chrV 13,224,279	contains similarity to Pfam domain PF00751 (DM DNA binding domain)
45	srw-84	Y43F8A.4	n/a	chrV 19,382,978	C. elegans SRW-84 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
46	srh-32	Y26G10.2	n/a	chrV 17,702,215	C. elegans SRH-32 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
47	srab-11	C36C5.8	n/a	chrV 3,146,053	C. elegans SRAB-11 protein; contains similarity to Pfam domain PF02175 C.elegans integral membrane protein Srb contains similarity to Interpro domain IPR002184 (Serpentine beta receptor)
48	C31B8.2	C31B8.2	n/a	chrV 2,917,112	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domain IPR006583 (CW)
49	srbc-24	C45H4.10	n/a	chrV 2,152,386	C. elegans SRBC-24 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
50	ncx-5	Y32F6B.2	n/a	chrV 10,488,232	ncx-5 encodes a putative 4Na[+]/1Ca[2+],1K[+] exchanger, orthologous to human SLC24A1-5 and paralogous to NCX-4; NCX-5 is predicted to export free cytoplasmic Ca[2+] with low affinity but high capacity, being complemented by low-capacity/high-affinity Ca[2+] ATPase pumps such as MCA-1/-3; NCX-5 has tandem Calx-alpha domains predicted to carry out ion transport; NCX-5 has no obvious function in mass RNAi assays.