UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	W06G6.12	W06G6.12	6e-152	chrV 16,652,565	contains similarity to Methanosarcina mazei Hypothetical protein MM2681.; TR:Q8PTN2
2	C18A11.6	C18A11.6	n/a	chrX 8,034,037
3	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
4	C18A11.4	C18A11.4	n/a	chrX 8,046,427	contains similarity to Interpro domain IPR000980 (SH2 motif)
5	T26A5.4	T26A5.4	n/a	chrIII 6,461,112	contains similarity to Pfam domain PF00534 Glycosyl transferases group 1 contains similarity to Interpro domain IPR001296 (Glycosyl transferase, group 1)
6	scl-21	Y43F8B.5	n/a	chrV 19,495,187	C. elegans SCL-21 protein; contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR001283 (Allergen V5/Tpx-1 related)
7	srg-44	F31E9.2	n/a	chrV 17,329,671	C. elegans SRG-44 protein; contains similarity to Pfam domain PF02118 C.elegans Srg family integral membrane protein contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
8	F09F9.3	F09F9.3	n/a	chrX 4,120,310
9	srh-71	T10D4.5	n/a	chrII 3,124,197	C. elegans SRH-71 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
10	F21D9.8	F21D9.8	n/a	chrV 19,279,623	contains similarity to Medicago truncatula Pectin methyl-esterase PER precursor (EC 3.1.1.11).; TR:Q9SC90
11	math-16	C16C4.8	n/a	chrII 1,878,171	C. elegans MATH-16 protein; contains similarity to Pfam domain PF00917 MATH domain contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH)
12	xbx-4	C23H5.3	n/a	chrIV 2,115,124	C. elegans XBX-4 protein ;
13	F19G12.3	F19G12.3	n/a	chrX 1,425,941	contains similarity to Pfam domain PF02170 PAZ domain contains similarity to Interpro domain IPR003100 (Argonaute and Dicer protein, PAZ)
14	B0432.1	B0432.1	n/a	chrII 298,462
15	F19H6.3	F19H6.3	n/a	chrX 12,369,640	contains similarity to Homo sapiens Hypothetical protein; ENSEMBL:ENSP00000302021
16	T06C12.14	T06C12.14	n/a	chrV 15,900,422	contains similarity to Pfam domain PF01549 ShK domain-like contains similarity to Interpro domain IPR003582 (Metridin-like ShK toxin)
17	set-13	K12H6.11	n/a	chrII 2,818,048	set-13 encodes a SET domain-containing protein; SET-13 has no non-nematode orthologs, but several paralogs (SET-6, SET-15, SET-19, SET-20, SET-21, and SET-32); neither set-13(n5012) nor set-13(RNAi) have any obvious phenotypes.
18	B0034.5	B0034.5	n/a	chrII 5,973,873	contains similarity to Interpro domain IPR000276 (GPCR, rhodopsin-like)
19	C05D9.3	C05D9.3	n/a	chrX 1,114,346	contains similarity to Pfam domain PF07974 EGF-like domain contains similarity to Interpro domains IPR002369 (Integrin beta subunit, N-terminal), IPR001169 (Integrin beta subunit, C-terminal), IPR015812 (Integrin beta subunit), IPR003659 (Plexin/semaphorin/integrin), IPR013032 (EGF-like region, conserved site), IPR013111 (EGF, extracellular)
20	C08B11.3	C08B11.3	n/a	chrII 8,025,126	contains similarity to Pfam domain PF01388 ARID/BRIGHT DNA binding domain contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR016024 (Armadillo-type fold), IPR007087 (Zinc finger, C2H2-type), IPR001606 (AT-rich interaction region)
21	F02C12.4	F02C12.4	n/a	chrX 13,393,433	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
22	C07E3.8	C07E3.8	n/a	chrII 10,352,798	contains similarity to Pfam domain PF06542 Protein of unknown function (DUF1114) contains similarity to Interpro domain IPR009497 (Protein of unknown function DUF1114)
23	hlh-10	ZK682.4	n/a	chrV 9,281,043	C. elegans HLH-10 protein; contains similarity to Pfam domain PF00010 Helix-loop-helix DNA-binding domain contains similarity to Interpro domains IPR001092 (Basic helix-loop-helix dimerisation region bHLH), IPR011598 (Helix-loop-helix DNA-binding)
24	T23G5.3	T23G5.3	n/a	chrIII 9,230,130	contains similarity to Pfam domains PF02214 (K+ channel tetramerisation domain) , PF00786 (P21-Rho-binding domain) contains similarity to Interpro domains IPR000694 (Proline-rich region), IPR000095 (PAK-box/P21-Rho-binding), IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation)
25	srh-48	C06C3.6	n/a	chrII 9,384,056	C. elegans SRH-48 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
26	F59B2.11	F59B2.11	n/a	chrIII 9,014,893	contains similarity to Homo sapiens hypothetical protein; VG:OTTHUMP00000025312
27	F47B7.5	F47B7.5	n/a	chrX 3,768,291	contains similarity to Pfam domain PF02343 Domain of unknown function DUF130 contains similarity to Interpro domain IPR003326 (Protein of unknown function DUF130)
28	C02H6.1	C02H6.1	n/a	chrV 7,389,111	contains similarity to Pfam domain PF01762 Galactosyltransferase contains similarity to Interpro domain IPR002659 (Glycosyl transferase, family 31)
29	F26A1.7	F26A1.7	n/a	chrIII 4,819,598
30	srbc-23	C45H4.9	n/a	chrV 2,154,343	C. elegans SRBC-23 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
31	gcy-27	C06A12.4	n/a	chrIV 17,436,419	C. elegans GCY-27 protein; contains similarity to Pfam domains PF00211 (Adenylate and Guanylate cyclase catalytic domain) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001054 (Adenylyl cyclase class-3/4/guanylyl cyclase), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
32	Y48E1B.7	Y48E1B.7	n/a	chrII 13,580,236	Y48E1B.7 encodes a C2H2-type zinc-finger protein required for embryonic development and fertility; Y48E1B.7 transcript levels are diminished by ERI-1, RDE-3, and RRF-2, perhaps through endogenous RNAi; Y48E1B.7 is paralogous to MCD-1, but has no obvious non-nematode orthologs; Y48E1B.7 contains a single central zinc-finger and a C-terminal low-complexity region, but no other recognizable protein domains.
33	F10D2.8	F10D2.8	n/a	chrV 7,150,438	contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)
34	R119.2	R119.2	n/a	chrI 370,004	contains similarity to Pfam domain PF00557 metallopeptidase family M24 contains similarity to Interpro domains IPR000994 (Peptidase M24, catalytic core), IPR001714 (Peptidase M24, methionine aminopeptidase)
35	srx-46	E02C12.2	n/a	chrV 9,353,867	C. elegans SRX-46 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
36	C47E12.2	C47E12.2	n/a	chrIV 10,002,723	contains similarity to Pfam domain PF00153 Mitochondrial carrier protein contains similarity to Interpro domains IPR002067 (Mitochondrial carrier protein), IPR002030 (Mitochondrial brown fat uncoupling protein), IPR001993 (Mitochondrial substrate carrier), IPR002113 (Adenine nucleotide translocator 1)
37	str-38	T23D5.2	n/a	chrV 15,731,518	C. elegans STR-38 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
38	R52.4	R52.4	n/a	chrII 2,107,797
39	B0284.3	B0284.3	n/a	chrIII 4,380,175	contains similarity to Interpro domain IPR000215 (Protease inhibitor I4, serpin)
40	srbc-41	F16B4.10	n/a	chrV 1,613,815	C. elegans SRBC-41 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR002651 (Protein of unknown function DUF32), IPR000832 (GPCR, family 2, secretin-like)
41	T06D4.2	T06D4.2	n/a	chrII 3,385,081
42	srw-143	H27D07.3	n/a	chrV 2,940,553	C. elegans SRW-143 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
43	glt-4	T22E5.2	n/a	chrX 6,405,125	glt-4 encodes an ortholog of glutamate/aspartate and neutral amino acid transporters.
44	wee-1.1	F35H8.7	n/a	chrII 9,582,677	C. elegans WEE-1.1 protein; contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
45	str-109	F10A3.5	n/a	chrV 16,161,427	C. elegans STR-109 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
46	F59D12.3	F59D12.3	n/a	chrX 15,649,663	contains similarity to Pfam domain PF04590 Protein of unknown function, DUF595 contains similarity to Interpro domain IPR007669 (Protein of unknown function DUF595)
47	C27C7.7	C27C7.7	n/a	chrI 11,422,886	contains similarity to Pfam domain PF07149 Pes-10 contains similarity to Interpro domain IPR009819 (Pes-10)
48	sre-40	T05A7.8	n/a	chrII 4,682,734	C. elegans SRE-40 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
49	ZK218.4	ZK218.4	n/a	chrV 17,100,011	contains similarity to Interpro domain IPR000434 (Polycystic kidney disease type 1 protein)
50	srbc-21	C45H4.7	n/a	chrV 2,156,083	C. elegans SRBC-21 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR002651 (Protein of unknown function DUF32), IPR001118 (Na+/H+ exchanger, isoform 3 (NHE3))