UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	W05H5.2	W05H5.2	8e-18	chrII 12,442,169	contains similarity to Xanthomonas campestris Hypothetical protein.; TR:Q9Z3D0
2	C46E10.2	C46E10.2	n/a	chrII 3,723,631
3	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
4	F25E2.1	F25E2.1	n/a	chrX 803,494	contains similarity to Interpro domain IPR000276 (GPCR, rhodopsin-like)
5	F19B10.6	F19B10.6	n/a	chrII 3,663,696
6	math-25	C46F9.4	n/a	chrII 1,896,912	C. elegans MATH-25 protein; contains similarity to Pfam domain PF00917 MATH domain contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH)
7	Y70C5C.3	Y70C5C.3	n/a	chrV 16,714,293	contains similarity to Pfam domain PF03269 Caenorhabditis protein of unknown function, DUF268 contains similarity to Interpro domain IPR004951 (Protein of unknown function DUF268, Caenorhabditis species)
8	str-89	F59A1.4	n/a	chrV 17,670,073	C. elegans STR-89 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
9	C54D10.8	C54D10.8	n/a	chrV 12,445,902	contains similarity to Homo sapiens cDNA FLJ44007 fis, clone TESTI4023762; ENSEMBL:ENSP00000364402
10	srj-27	T01G5.3	n/a	chrV 15,126,838	C. elegans SRJ-27 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
11	srv-6	C52B9.5	n/a	chrX 4,258,053	C. elegans SRV-6 protein ;
12	srd-39	R04D3.8	n/a	chrX 13,299,680	C. elegans SRD-39 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
13	grk-2	W02B3.2	n/a	chrIII 678,078	grk-2 encodes a serine/threonine protein kinase that is most closely related to G protein-coupled receptor (GPCR) kinases; in C. elegans, grk-2 activity is required in chemosensory neurons for normal calcium influx during chemosensation, but is not required for GPCR downregulation; in regulating chemosensation, GRK-2 likely acts upstream of the ODR-3/G alpha protein, as overexpression of ODR-3 can rescue abnormal avoidance behavior in grk-2 mutants; GRK-2 is broadly expressed in the adult nervous system, with expression beginning as early as the 20-30-cell stage of embryonic development and continuing into adulthood.
14	Y54G9A.1	Y54G9A.1	n/a	chrII 13,700,041	contains similarity to Carabus linnei NADH dehydrogenase subunit 5 (Fragment).; TR:O79584
15	T28A11.6	T28A11.6	n/a	chrV 3,262,901
16	ZK1240.6	ZK1240.6	n/a	chrII 2,322,661	contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger) contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR000315 (Zinc finger, B-box)
17	C01B7.3	C01B7.3	n/a	chrV 8,783,769
18	srh-203	F20E11.10	n/a	chrV 17,455,364	C. elegans SRH-203 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
19	F55A4.4	F55A4.4	n/a	chrX 1,025,409	contains similarity to Pfam domain PF00035 Double-stranded RNA binding motif contains similarity to Interpro domains IPR001159 (Double-stranded RNA binding), IPR014720 (Double-stranded RNA-binding-like)
20	B0496.1	B0496.1	n/a	chrIV 7,446,888	contains similarity to Pfam domain PF00651 BTB/POZ domain contains similarity to Interpro domains IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ), IPR000210 (BTB/POZ-like)
21	C04F5.2	C04F5.2	n/a	chrV 5,094,981
22	F45F2.1	F45F2.1	n/a	chrV 8,538,519	contains similarity to Pfam domain PF03189 Protein of unknown function, DUF270 contains similarity to Interpro domain IPR004878 (Protein of unknown function DUF270)
23	srh-102	F40D4.11	n/a	chrV 17,164,173	C. elegans SRH-102 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
24	C45E5.3	C45E5.3	n/a	chrIV 5,740,334	contains similarity to Pfam domain PF00704 Glycosyl hydrolases family 18 contains similarity to Interpro domains IPR011583 (Chitinase II), IPR017853 (Glycoside hydrolase, catalytic core), IPR001223 (Glycoside hydrolase, family 18, catalytic domain), IPR013781 (Glycoside hydrolase, subgroup, catalytic core), IPR001574 (Ribosome-inactivating protein)
25	T09F5.2	T09F5.2	n/a	chrV 15,151,275	contains similarity to Saccharomyces cerevisiae cell wall mannoprotein; SGD:YOR009W
26	srw-10	ZC482.6	n/a	chrIII 12,755,860	C. elegans SRW-10 protein ;
27	dod-20	B0554.6	n/a	chrV 423,333	C. elegans DOD-20 protein; contains similarity to Pfam domain PF03409 Protein of unknown function (DUF274) contains similarity to Interpro domain IPR005071 (Protein of unknown function DUF274)
28	C18H9.2	C18H9.2	n/a	chrII 6,690,893	contains similarity to Xenopus laevis PERQ amino acid-rich with GYF domain-containing protein 2s(Trinucleotide repeat-containing gene 15 protein).; SW:Q5U236
29	math-31	F52C6.6	n/a	chrII 1,912,654	C. elegans MATH-31 protein; contains similarity to Pfam domain PF00917 MATH domain contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH)
30	srh-122	R08H2.5	n/a	chrV 15,377,228	C. elegans SRH-122 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
31	srz-58	F31E9.5	n/a	chrV 17,318,799	C. elegans SRZ-58 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
32	nhr-159	C17E7.7	n/a	chrV 3,876,286	C. elegans NHR-159 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
33	C04B4.6	C04B4.6	n/a	chrX 12,275,348	contains similarity to Corynebacterium efficiens Putative alanyl-tRNA synthetase.; TR:Q8FT23
34	C56G7.2	C56G7.2	n/a	chrIII 3,387,880	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
35	sulp-5	K12G11.2	n/a	chrV 11,881,591	sulp-5 encodes one of eight C. elegans members of the sulfate permease family of anion transporters; by homology, SULP-5 is predicted to function as an anion transporter that regulates cellular pH and volume via transmembrane movement of electrolytes and fluids; a SULP-5::GFP fusion is expressed in punctate structures irregularly distributed along the apical membrane of excretory cell canals and is also expressed weakly in adult seam cells.
36	T05H10.8	T05H10.8	n/a	chrII 8,060,196	contains similarity to Streptococcus pneumoniae Cell division regulator, negative regulator of FtsZ ringsformation.; TR:Q8DQE5
37	K12H6.2	K12H6.2	n/a	chrII 2,814,250
38	R11D1.4	R11D1.4	n/a	chrV 12,713,623	contains similarity to Xenopus laevis Similar to kinesin-like 1.; TR:Q8AVK8
39	Y116A8C.1	Y116A8C.1	n/a	chrIV 16,901,344	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domain IPR006583 (CW)
40	R160.4	R160.4	n/a	chrX 4,367,984
41	Y5F2A.3	Y5F2A.3	n/a	chrIV 11,069,794	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domain IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)
42	Y37E11B.7	Y37E11B.7	n/a	chrIV 3,599,789
43	C30G4.6	C30G4.6	n/a	chrX 17,077,020	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
44	C40H5.7	C40H5.7	n/a	chrX 11,746,531	contains similarity to Pfam domain PF00008 EGF-like domain contains similarity to Interpro domains IPR001438 (EGF-like, type 2), IPR000742 (EGF-like, type 3), IPR006209 (EGF-like), IPR006210 (EGF), IPR013032 (EGF-like region, conserved site)
45	lgc-6	F17E9.8	n/a	chrIV 8,341,064	C. elegans LGC-6 protein; contains similarity to Pfam domain PF02931 Neurotransmitter-gated ion-channel ligand binding domain contains similarity to Interpro domains IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding)
46	C36C5.4	C36C5.4	n/a	chrV 3,167,003	contains similarity to Pfam domain PF01579 Domain of unknown function DUF19 contains similarity to Interpro domains IPR016638 (Uncharacterised conserved protein UPF0376), IPR002542 (Protein of unknown function DUF19)
47	srg-32	T21C9.7	n/a	chrV 10,587,952	C. elegans SRG-32 protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
48	str-204	F10D2.1	n/a	chrV 7,160,334	C. elegans STR-204 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
49	C45G3.4	C45G3.4	n/a	chrI 9,219,134	contains similarity to Dictyostelium discoideum Prespore-specific protein (Fragment).; TR:O97140
50	srh-59	W10G11.10	n/a	chrII 3,582,748	C. elegans SRH-59 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)