UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	W04G5.4	W04G5.4	0	chrI 11,631,445	contains similarity to Pfam domain PF04721 Domain of unknown function (DUF750) contains similarity to Interpro domains IPR008996 (Cytokine, IL-1-like), IPR006588 (Protein of unknown function PAW)
2	T05H4.7	T05H4.7	n/a	chrV 6,416,194	contains similarity to Pfam domain PF00182 Chitinase class I contains similarity to Interpro domain IPR000726 (Glycoside hydrolase, family 19, catalytic)
3	R03H10.2	R03H10.2	n/a	chrII 4,161,532
4	W09C3.3	W09C3.3	n/a	chrI 4,708,334	contains similarity to Pfam domain PF01482 Domain of unknown function DUF13 contains similarity to Interpro domain IPR002485 (Protein of unknown function DUF13)
5	T01C3.1	T01C3.1	n/a	chrV 14,989,266	contains similarity to Pfam domains PF00169 (PH domain) , PF06920 (Dedicator of cytokinesis) contains similarity to Interpro domains IPR001849 (Pleckstrin-like), IPR000694 (Proline-rich region), IPR010703 (Dedicator of cytokinesis)
6	F10E7.8	F10E7.8	n/a	chrII 7,103,165	F10E7.8 encodes a FAR11-like protein that inhibits DHC-1 in vivo; F10E7.8 is orthologous to human FAM40A and FAM40B, and to budding yeast FAR11; F10E7.8(RNAi) suppresses the lethality of conditional dhc-1 mutations, as well as the spindle length and cytokinesis defects of dhc-1(or195), indicating that F10E7.8 negatively regulates dynein; in early embryos, F10E7.8 is a pronuclear and nuclear protein; F10E7.8 has no obvious function in mass RNAi assays.
7	T28A11.17	T28A11.17	n/a	chrV 3,264,867	T28A11.17 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; T28A11.17 has no clear orthologs in other organisms.
8	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
9	gur-5	ZK622.2	n/a	chrII 5,287,091	C. elegans GUR-5 protein ;
10	R106.1	R106.1	n/a	chrX 17,479,990
11	Y37H2B.1	Y37H2B.1	n/a	chrV 18,227,570	contains similarity to Xylella fastidiosa Beta-hexosaminidase precursor.; TR:Q9PF31
12	ZK697.1	ZK697.1	n/a	chrV 1,753,103
13	C16D6.3	C16D6.3	n/a	chrX 12,526,895	contains similarity to Prochlorococcus marinus Predicted protein.; TR:Q7VCK1
14	str-220	C42D4.9	n/a	chrIV 7,170,609	str-220 encodes a seven transmembrane chemoreceptor; microarray analyses indicate that str-220 is expressed at higher levels in the AWB olfactory neurons than the AFD thermosensory neurons; anatomical expression studies confirm expression in the AWB neurons; expression of str-220 in AWB is regulated, in part, by the KIN-29 Ser/Thr kinase.
15	srj-44	T03D3.11	n/a	chrV 2,845,216	C. elegans SRJ-44 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
16	srx-44	T10C6.4	n/a	chrV 16,021,667	C. elegans SRX-44 protein ; contains similarity to Rattus norvegicus Blue-sensitive opsin (BOP) (Blue cone photoreceptor pigment) (Shortswavelength-sensitive cone opsin) (S opsin).; SW:Q63652
17	M03F8.5	M03F8.5	n/a	chrV 5,935,209	contains similarity to Pfam domain PF02995 Protein of unknown function (DUF229) contains similarity to Interpro domain IPR004245 (Protein of unknown function DUF229)
18	W05H5.3	W05H5.3	n/a	chrII 12,446,465	contains similarity to Pfam domain PF01384 Phosphate transporter family contains similarity to Interpro domain IPR001204 (Phosphate transporter)
19	F19G12.2	F19G12.2	n/a	chrX 1,429,318	contains similarity to Pfam domain PF00268 Ribonucleotide reductase, small chain contains similarity to Interpro domains IPR012348 (Ribonucleotide reductase-related), IPR000358 (Ribonucleotide reductase), IPR009078 (Ferritin/ribonucleotide reductase-like)
20	srh-3	K04F1.5	n/a	chrV 1,683,835	C. elegans SRH-3 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR001024 (Lipoxygenase, LH2)
21	F55E10.4	F55E10.4	n/a	chrX 8,327,670
22	F09G8.7	F09G8.7	n/a	chrIII 8,268,070
23	C18B2.2	C18B2.2	n/a	chrX 3,625,928	contains similarity to Pfam domain PF04590 Protein of unknown function, DUF595 contains similarity to Interpro domain IPR007669 (Protein of unknown function DUF595)
24	B0379.6	B0379.6	n/a	chrI 10,097,535	contains similarity to Saccharomyces cerevisiae Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the small subunit processome complex, which is required for processing of pre-18S rRNA; SGD:YOR310C
25	F52G3.4	F52G3.4	n/a	chrX 16,950,151
26	F56C3.3	F56C3.3	n/a	chrX 1,358,147
27	C56A3.6	C56A3.6	n/a	chrV 13,554,913	contains similarity to Pfam domain PF00036 (EF hand)
28	K04A8.2	K04A8.2	n/a	chrV 6,563,097	contains similarity to Pfam domain PF03269 Caenorhabditis protein of unknown function, DUF268 contains similarity to Interpro domain IPR004951 (Protein of unknown function DUF268, Caenorhabditis species)
29	col-148	C12D8.8	n/a	chrV 10,242,222	C. elegans COL-148 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) (2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR003979 (Tropoelastin), IPR000694 (Proline-rich region), IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat)
30	R05A10.5	R05A10.5	n/a	chrIV 14,169,839	contains similarity to Interpro domain IPR000884 (Thrombospondin, type I)
31	srt-62	T27C10.2	n/a	chrI 10,900,411	C. elegans SRT-62 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
32	T06E8.2	T06E8.2	n/a	chrV 10,036,032
33	R155.4	R155.4	n/a	chrIII 1,978,876	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domains IPR008967 (p53-like transcription factor, DNA-binding), IPR003125 (Protein of unknown function WSN), IPR005427 (Salmonella/Shigella invasin protein C)
34	T28C6.7	T28C6.7	n/a	chrIV 8,828,801	contains similarity to Interpro domain IPR009055 (UvrB, C-terminal UvrC-binding)
35	ZC132.8	ZC132.8	n/a	chrV 4,316,012
36	clec-244	T27C5.7	n/a	chrV 17,414,115	C. elegans CLEC-244 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
37	T01H10.8	T01H10.8	n/a	chrX 12,134,602	T01H10.8 encodes a BEACH domain-containing protein that is orthologous to the mammalian lysosomal trafficking regulator LYST which when mutated leads to Chediak-Higashi syndrome (CHS, OMIM:606897).
38	srh-207	ZK262.1	n/a	chrV 18,409,607	C. elegans SRH-207 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
39	F54F3.4	F54F3.4	n/a	chrV 12,923,361	contains similarity to Pfam domain PF00106 short chain dehydrogenase contains similarity to Interpro domains IPR003560 (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR), IPR016040 (NAD(P)-binding)
40	F33A8.6	F33A8.6	n/a	chrII 11,051,217	contains similarity to Pfam domain PF00481 Protein phosphatase 2C contains similarity to Interpro domains IPR001932 (Protein phosphatase 2C-related), IPR000222 (), IPR014045 (Protein phosphatase 2C, N-terminal), IPR015655 (Protein phosphatase 2C)
41	srj-8	T28A11.9	n/a	chrV 3,248,476	C. elegans SRJ-8 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
42	ZC477.4	ZC477.4	n/a	chrIV 7,098,647
43	F36H5.4	F36H5.4	n/a	chrII 1,762,375
44	C30G12.3	C30G12.3	n/a	chrII 7,275,917
45	C01G5.7	C01G5.7	n/a	chrIV 6,518,588
46	T21D9.2	T21D9.2	n/a	chrX 2,095,709	contains similarity to Interpro domain IPR008075 (Lipocalin-1 receptor)
47	K07G5.3	K07G5.3	n/a	chrI 7,163,733	contains similarity to Pfam domain PF00168 C2 domain contains similarity to Interpro domains IPR008973 (C2 calcium/lipid-binding region, CaLB), IPR000008 (C2 calcium-dependent membrane targeting)
48	F54D5.11	F54D5.11	n/a	chrII 11,541,574	contains similarity to Pfam domain PF02186 TFIIE beta subunit core domain contains similarity to Interpro domains IPR011991 (Winged helix repressor DNA-binding), IPR016656 (Transcription initiation factor IIE, beta subunit), IPR003166 (Transcription factor TFIIE beta subunit, core)
49	fip-5	F41E7.4	n/a	chrX 10,302,828	C. elegans FIP-5 protein; contains similarity to Interpro domain IPR000480 (Glutelin)
50	srh-99	C46E10.7	n/a	chrII 3,715,771	C. elegans SRH-99 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)