UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	nhr-223	T26E4.8	2e-180	chrV 15,796,934	C. elegans NHR-223 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
2	D2089.3	D2089.3	n/a	chrII 10,663,519	contains similarity to Homo sapiens hypothetical protein LOC150383; ENSEMBL:ENSP00000325301
3	F55A4.4	F55A4.4	n/a	chrX 1,025,409	contains similarity to Pfam domain PF00035 Double-stranded RNA binding motif contains similarity to Interpro domains IPR001159 (Double-stranded RNA binding), IPR014720 (Double-stranded RNA-binding-like)
4	srb-1	C27D6.10	n/a	chrII 5,170,361	C. elegans SRB-1 protein; contains similarity to Pfam domain PF02175 C.elegans integral membrane protein Srb contains similarity to Interpro domain IPR002184 (Serpentine beta receptor)
5	T11G6.5	T11G6.5	n/a	chrIV 10,839,263	contains similarity to Interpro domain IPR000694 (Proline-rich region)
6	B0496.1	B0496.1	n/a	chrIV 7,446,888	contains similarity to Pfam domain PF00651 BTB/POZ domain contains similarity to Interpro domains IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ), IPR000210 (BTB/POZ-like)
7	W03G1.8	W03G1.8	n/a	chrIV 527,981
8	math-50	ZK250.8	n/a	chrII 1,957,153	math-50 encodes a protein which has a meprin-associated Traf homology (MATH) domain and may be involved in apoptosis.
9	nhr-159	C17E7.7	2e-20	chrV 3,876,286	C. elegans NHR-159 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
10	F40H6.2	F40H6.2	n/a	chrIII 6,042,332
11	F31A3.5	F31A3.5	n/a	chrX 17,558,148	contains similarity to Interpro domain IPR000694 (Proline-rich region)
12	K07C11.10	K07C11.10	n/a	chrV 8,226,436	contains similarity to Homo sapiens hypothetical protein isoform 1; ENSEMBL:ENSP00000381337
13	str-233	C06C6.2	n/a	chrV 16,008,971	C. elegans STR-233 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
14	taf-13	C14A4.10	n/a	chrII 10,605,243	taf-13 encodes a predicted member of the transcription initiation factor IID, 18kDa subunit family with similarity to Drosophila Taf13.
15	srb-8	F37C12.15	n/a	chrIII 7,172,652	C. elegans SRB-8 protein; contains similarity to Pfam domains PF02117 (C.elegans Sra family integral membrane protein) , PF02175 (C.elegans integral membrane protein Srb) contains similarity to Interpro domains IPR002184 (Serpentine beta receptor), IPR000344 (Nematode chemoreceptor, Sra)
16	bbs-2	F20D12.3	n/a	chrIV 7,935,876	bbs-2 is orthologous to human BBS2 (OMIM:606151, mutated in Bardet-Biedl syndrome 2); while the function of BBS-2 is unknown, it shares conserved domains with its human paralogs BBS1 and BBS7, which also are mutated in other Bardet-Biedl syndromes.
17	str-63	C17B7.1	n/a	chrV 3,352,167	C. elegans STR-63 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
18	T18D3.5	T18D3.5	n/a	chrX 12,464,020	contains similarity to Streptococcus pneumoniae Com protein (Fragment).; TR:Q9RIM4
19	srbc-11	C18B10.1	n/a	chrV 7,494,565	C. elegans SRBC-11 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
20	Y75B8A.31	Y75B8A.31	n/a	chrIII 12,353,159	contains similarity to Homo sapiens Isoform 1 of UPF0528 protein C5orf21 precursor; ENSEMBL:ENSP00000265139
21	srb-9	F37C12.16	n/a	chrIII 7,174,868	C. elegans SRB-9 protein; contains similarity to Pfam domains PF02117 (C.elegans Sra family integral membrane protein) , PF02175 (C.elegans integral membrane protein Srb) contains similarity to Interpro domains IPR002184 (Serpentine beta receptor), IPR000344 (Nematode chemoreceptor, Sra)
22	F14F9.6	F14F9.6	n/a	chrV 5,148,306
23	F16G10.14	F16G10.14	n/a	chrII 2,398,093	contains similarity to Pfam domain PF02343 Domain of unknown function DUF130 contains similarity to Interpro domain IPR003326 (Protein of unknown function DUF130)
24	F07G6.2	F07G6.2	n/a	chrX 1,728,163
25	srh-140	Y6E2A.6	n/a	chrV 15,723,067	C. elegans SRH-140 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR000484 (Photosynthetic reaction centre, L and M subunits)
26	E03H4.7	E03H4.7	n/a	chrI 12,422,814	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domain IPR002656 (Acyltransferase 3)
27	T25F10.4	T25F10.4	n/a	chrV 6,761,420	contains similarity to Interpro domain IPR006202 (Neurotransmitter-gated ion-channel ligand-binding)
28	Y1A5A.2	Y1A5A.2	n/a	chrIII 3,984,495	contains similarity to Corynebacterium efficiens Putative nitrate transport protein.; TR:Q8FPW8
29	F26A1.6	F26A1.6	n/a	chrIII 4,816,522	contains similarity to Lumbricus rubellus Amine oxidase-like protein (Fragment).; TR:Q94610
30	gcy-23	T26C12.4	n/a	chrIV 3,286,107	gcy-23 encodes a receptor-type guanylyl cyclase that, along with gcy-8 and gcy-18, constitutes a subfamily of guanylyl cyclase genes in C. elegans; gcy-23 functions redundantly with gcy-8 and gcy-18, and upstream of tax-4, to regulate thermotaxis via the AFD thermosensory neurons, although of the three guanylyl cyclases required, genetic analyses suggest that GCY-18 is the primary guanylyl cyclase required; in addition, loss of gcy-23 activity via RNAi results in lifespan extension; GCY-23 is expressed exclusively in the AFD thermosensory neurons, where it localizes to sensory endings.
31	R12B2.2	R12B2.2	n/a	chrIII 5,808,424	contains similarity to Homo sapiens Isoform 1 of Golgin-45; ENSEMBL:ENSP00000327541
32	srh-74	C45B11.4	n/a	chrV 11,047,962	C. elegans SRH-74 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
33	ZK816.3	ZK816.3	n/a	chrX 3,348,370
34	ZC404.10	ZC404.10	n/a	chrV 6,801,320	contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
35	nhr-149	C03G6.12	0.00001	chrV 7,349,121	C. elegans NHR-149 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
36	F59D6.4	F59D6.4	n/a	chrV 3,030,897	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
37	cyp-33C1	C45H4.2	n/a	chrV 2,180,672	C. elegans CYP-33C1 protein; contains similarity to Pfam domain PF00067 Cytochrome P450 contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR002403 (Cytochrome P450, E-class, group IV), IPR002397 (Cytochrome P450, B-class)
38	Y54G9A.1	Y54G9A.1	n/a	chrII 13,700,041	contains similarity to Carabus linnei NADH dehydrogenase subunit 5 (Fragment).; TR:O79584
39	nhr-268	K06B4.6	2e-21	chrV 15,690,903	C. elegans NHR-268 protein
40	fbxb-41	M01D1.8	n/a	chrII 1,041,839	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function.
41	T25D1.2	T25D1.2	n/a	chrX 16,516,558	contains similarity to Pfam domain PF06869 Protein of unknown function (DUF1258) contains similarity to Interpro domains IPR009667 (Protein of unknown function DUF1258), IPR011332 (Ribosomal protein, zinc-binding)
42	srz-23	F58E2.9	n/a	chrIV 3,454,195	C. elegans SRZ-23 protein ;
43	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
44	srw-113	ZK1037.9	n/a	chrV 15,333,837	C. elegans SRW-113 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
45	sre-6	F28H7.9	n/a	chrV 10,761,699	C. elegans SRE-6 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
46	srv-21	H04M03.8	n/a	chrIV 5,876,704	C. elegans SRV-21 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR002651 (Protein of unknown function DUF32)
47	F55B12.2	F55B12.2	n/a	chrV 13,816,154	contains similarity to Pfam domain PF04590 Protein of unknown function, DUF595 contains similarity to Interpro domain IPR007669 (Protein of unknown function DUF595)
48	srw-140	C03A7.3	n/a	chrV 5,166,467	C. elegans SRW-140 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
49	srj-22	F28H7.1	n/a	chrV 10,743,082	C. elegans SRJ-22 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
50	clec-195	Y116A8C.21	n/a	chrIV 17,044,558	C. elegans CLEC-195 protein; contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domains IPR006583 (CW), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)