UCSC C. elegans Gene Sorter

JavaScript is disabled in your web browser

You must have JavaScript enabled in your web browser to use the Genome Browser

UCSC C. elegans Gene Sorter

genome assembly search

sort by display output

#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	T26E3.6	T26E3.6	4.999999999999999e-63	chrI 12,661,501	contains similarity to Homo sapiens Low-density lipoprotein receptor-related protein 2 precursor; ENSEMBL:ENSP00000263816
2	F46F5.14	F46F5.14	n/a	chrII 800,774	contains similarity to Pfam domain PF03314 Protein of unknown function, DUF273 contains similarity to Interpro domain IPR004988 (Protein of unknown function DUF273)
3	K12H6.8	K12H6.8	n/a	chrII 2,828,347
4	ZK380.2	ZK380.2	n/a	chrX 1,633,167	contains similarity to Interpro domain IPR011072 (HR1 rho-binding repeat)
5	nas-19	K03B8.5	n/a	chrV 11,402,129	nas-19 encodes an astacin-like metalloprotease; large-scale expression studies reveal that a nas-19::GFP promoter fusion is expressed in the pharynx, intestine, vulva, and reproductive system.
6	sri-37	D2062.2	n/a	chrII 2,630,401	C. elegans SRI-37 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
7	clec-232	F36G9.11	n/a	chrV 15,976,833	C. elegans CLEC-232 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
8	F41B4.3	F41B4.3	n/a	chrX 6,835,782
9	T26A8.3	T26A8.3	n/a	chrIV 8,425,562
10	C16C8.7	C16C8.7	n/a	chrII 3,459,961
11	scl-9	F49E11.4	n/a	chrIV 13,047,679	C. elegans SCL-9 protein; contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1 related)
12	F49F1.11	F49F1.11	n/a	chrIV 4,140,539	contains similarity to Pfam domain PF00337 Galactoside-binding lectin contains similarity to Interpro domains IPR001079 (Galectin, galactose-binding lectin), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup), IPR008985 (Concanavalin A-like lectin/glucanase)
13	K12H6.4	K12H6.4	n/a	chrII 2,823,987
14	clec-94	ZK39.3	n/a	chrI 11,147,370	C. elegans CLEC-94 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
15	R107.2	R107.2	n/a	chrIII 9,044,850	contains similarity to Pfam domain PF01256 Carbohydrate kinase contains similarity to Interpro domain IPR000631 (Carbohydrate kinase)
16	srj-8	T28A11.9	n/a	chrV 3,248,476	C. elegans SRJ-8 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
17	fipr-16	C06E1.6	n/a	chrIII 8,590,815	C. elegans FIPR-16 protein ;
18	C16C8.9	C16C8.9	n/a	chrII 3,462,897
19	clec-95	ZK39.2	n/a	chrI 11,149,626	C. elegans CLEC-95 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
20	Y43F8C.16	Y43F8C.16	n/a	chrV 19,710,255	contains similarity to Drosophila melanogaster Flybase gene name is CG31439-PA;; FLYBASE:CG31439
21	Y43F8C.17	Y43F8C.17	n/a	chrV 19,712,303	contains similarity to Rhodosporidium toruloides Rhodotorucine A precursor 2.; SW:RHT2_RHOTO
22	clec-207	F36F12.5	n/a	chrV 2,096,664	C. elegans CLEC-207 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
23	C16C8.10	C16C8.10	n/a	chrII 3,464,412
24	R53.8	R53.8	n/a	chrII 9,977,190	contains similarity to Homo sapiens Putative uncharacterized protein (Fragment); ENSEMBL:ENSP00000333119
25	C09G12.5	C09G12.5	n/a	chrIV 3,479,529
26	M7.10	M7.10	n/a	chrIV 11,102,300	contains similarity to Pfam domain PF02520 Domain of unknown function DUF148 contains similarity to Interpro domains IPR001703 (Alpha-fetoprotein), IPR003677 (Protein of unknown function DUF148)
27	clec-161	F58A4.5	n/a	chrIII 9,605,759	C. elegans CLEC-161 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
28	clec-126	W09G10.5	n/a	chrII 3,519,952	C. elegans CLEC-126 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
29	T02D1.7	T02D1.7	n/a	chrIV 17,406,968	contains similarity to Rhizobium meliloti Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenasescomplex (EC 2.3.1.12) (E2).; SW:ODP2_RHIME
30	grd-5	F41E6.2	n/a	chrV 8,619,427	grd-5 encodes a hedgehog-like protein, with an N-terminal signal sequence and a C-terminal Ground domain; GRD-5 is expressed in adult anterior and posterior seam cells, overlapping GRD-3 expression; the Ground domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins; GRD-5 is weakly required for normal molting; GRD-5 is also required for normal adult alae formation, growth to full size, and locomotion; all of these requirements may reflect common defects in cholesterol-dependent hedgehog-like signalling or in vesicle trafficking.
31	K12H6.5	K12H6.5	n/a	chrII 2,826,180
32	clec-106	Y18D10A.12	n/a	chrI 12,866,497	C. elegans CLEC-106 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
33	F58A4.1	F58A4.1	n/a	chrIII 9,599,163	contains similarity to Drosophila melanogaster Flybase gene name is CG34220-PA;; FLYBASE:CG34220
34	F49F1.9	F49F1.9	n/a	chrIV 4,137,200	contains similarity to Pfam domain PF00337 Galactoside-binding lectin contains similarity to Interpro domains IPR001079 (Galectin, galactose-binding lectin), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup), IPR000694 (Proline-rich region), IPR008985 (Concanavalin A-like lectin/glucanase)
35	try-5	K07B1.1	n/a	chrV 9,347,867	C. elegans TRY-5 protein; contains similarity to Pfam domain PF00089 Trypsin contains similarity to Interpro domains IPR001314 (Peptidase S1A, chymotrypsin), IPR001254 (Peptidase S1 and S6, chymotrypsin/Hap), IPR009003 (Peptidase, trypsin-like serine and cysteine)
36	clec-157	F26A1.12	n/a	chrIII 4,843,914	C. elegans CLEC-157 protein; contains similarity to Interpro domains IPR000694 (Proline-rich region), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
37	F46A8.5	F46A8.5	n/a	chrI 11,240,086	contains similarity to Pfam domain PF00337 Galactoside-binding lectin contains similarity to Interpro domains IPR001079 (Galectin, galactose-binding lectin), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup), IPR008985 (Concanavalin A-like lectin/glucanase)
38	F49F1.3	F49F1.3	n/a	chrIV 4,115,363	contains similarity to Interpro domain IPR000694 (Proline-rich region)
39	clec-125	W09G10.6	n/a	chrII 3,517,674	C. elegans CLEC-125 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
40	Y25C1A.2	Y25C1A.2	n/a	chrII 3,112,906	contains similarity to Pfam domain PF02343 Domain of unknown function DUF130 contains similarity to Interpro domain IPR003326 (Protein of unknown function DUF130)
41	D1022.2	D1022.2	n/a	chrII 7,459,718	contains similarity to Interpro domain IPR000884 (Thrombospondin, type I)
42	clec-96	ZK39.5	n/a	chrI 11,151,582	C. elegans CLEC-96 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin), IPR001202 (WW/Rsp5/WWP)
43	clec-208	F36F12.6	n/a	chrV 2,098,548	C. elegans CLEC-208 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
44	F19H6.6	F19H6.6	n/a	chrX 12,362,704	contains similarity to Saccharomyces cerevisiae Cytoplasmic protein of unknown function, potential Cdc28p substrate; SGD:YAL031C
45	F20A1.2	F20A1.2	n/a	chrV 7,047,678	contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
46	F18E9.7	F18E9.7	n/a	chrX 8,596,390
47	Y39F10A.3	Y39F10A.3	n/a	chrII 782,448	contains similarity to Pfam domain PF05050 Protein of unknown function (DUF672) contains similarity to Interpro domain IPR007744 (Protein of unknown function DUF672)
48	nhr-59	T27B7.1	n/a	chrV 2,277,137	C. elegans NHR-59 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
49	K11D12.6	K11D12.6	n/a	chrV 5,034,830	K11D12.6 encodes a putative serine protease inhibitor, with no obvious non-nematode orthologs but multiple C. elegans paralogs; K11D12.6 antagonizes CEP-1- and HUS-1-dependent germline apoptosis, as do BMK-1, RAD-50, and RAD-51.
50	F48G7.9	F48G7.9	n/a	chrV 628,338	contains similarity to Pfam domain PF00130 Phorbol esters/diacylglycerol binding domain (C1 domain) contains similarity to Interpro domains IPR015727 (Protein kinase C mu-related), IPR002219 (Protein kinase C, phorbol ester/diacylglycerol binding)