UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	T24C4.3	T24C4.3	9e-91	chrIII 872,071
2	C01A2.4	C01A2.4	n/a	chrI 13,393,035	contains similarity to Pfam domain PF03357 Snf7 contains similarity to Interpro domain IPR005024 (Snf7)
3	C26E1.1	C26E1.1	n/a	chrV 13,297,767	contains similarity to Rattus norvegicus GLUT4 vesicle protein.; TR:Q9Z1X1
4	glb-9	C28F5.2	n/a	chrII 7,510,599	glb-9 encodes a globin with no obvious function in mass RNAi assays.
5	F28H6.6	F28H6.6	n/a	chrX 14,121,403	contains similarity to Interpro domain IPR010993 (Sterile alpha motif homology)
6	F57E7.1	F57E7.1	n/a	chrV 16,481,775	contains similarity to Bos taurus Enoyl-CoA hydratase precursor (EC 4.2.1.17) (Fragment).; TR:Q95KZ6
7	C09G5.8	C09G5.8	n/a	chrII 10,723,744	contains similarity to Mus musculus Protein fantom (RPGR-interacting protein 1-like protein) (RPGRIP1-likesprotein).; SW:Q8CG73
8	ZC518.4	ZC518.4	n/a	chrIV 12,367,373	contains similarity to Neurospora crassa Hypothetical protein B8B8.120.; TR:Q872S5
9	glb-25	T06A1.4	n/a	chrV 1,949,042	glb-25 encodes a globin required for normally rapid growth in mass RNAi assays.
10	nhr-76	C05G6.1	n/a	chrIV 630,739	C. elegans NHR-76 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
11	H42K12.2	H42K12.2	n/a	chrX 1,319,512
12	C47E8.3	C47E8.3	n/a	chrV 14,681,957	contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
13	dpr-1	R10D12.2	n/a	chrV 13,941,139	dpr-1 encodes a putative nuclear hormone receptor that affects endoderm differentiation and may promote entry into the dauer state and maintenance of the dauer state; expressed in the endoderm lineage and localization appears dependent on growth conditions.
14	F49H6.8	F49H6.8	n/a	chrV 17,022,485	contains similarity to Rattus norvegicus Transcription factor 8 (Zinc finger homeodomain enhancer-bindingsprotein) (Zfhep).; SW:TCF8_RAT
15	rsr-1	F28D9.1	n/a	chrI 11,179,945	C. elegans RSR-1 protein; contains similarity to Pfam domain PF01480 PWI domain contains similarity to Interpro domains IPR002483 (Splicing factor PWI), IPR000694 (Proline-rich region), IPR005819 (Histone H5), IPR002185 (Dopamine D4 receptor)
16	fbxb-118	W06A11.3	n/a	chrII 4,063,201	C. elegans FBXB-118 protein ;
17	srh-178	ZK228.8	n/a	chrV 18,479,364	C. elegans SRH-178 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
18	srw-117	C44C3.6	n/a	chrV 2,982,800	C. elegans SRW-117 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
19	F48G7.7	F48G7.7	n/a	chrV 626,072	contains similarity to Pfam domain PF01549 ShK domain-like contains similarity to Interpro domain IPR003582 (Metridin-like ShK toxin)
20	F47G6.3	F47G6.3	n/a	chrI 1,467,585	contains similarity to Homo sapiens Putative uncharacterized protein (Fragment); ENSEMBL:ENSP00000333119
21	srh-131	Y102A5C.31	n/a	chrV 17,006,090	C. elegans SRH-131 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
22	gstk-2	D2024.7	n/a	chrIV 7,241,341	C. elegans GSTK-2 protein; contains similarity to Pfam domain PF01323 DSBA-like thioredoxin domain contains similarity to Interpro domains IPR012336 (Thioredoxin-like fold), IPR001853 (DSBA oxidoreductase), IPR014440 (HCCA isomerase/glutathione S-transferase kappa)
23	F14F8.8	F14F8.8	n/a	chrV 16,671,873	contains similarity to Saccharomyces cerevisiae Daughter cell-specific secreted protein with similarity to glucanases, degrades cell wall from the daughter side causing daughter to separate from mother; expression is repressed by cAMP; SGD:YHR143W
24	K02G10.1	K02G10.1	n/a	chrX 4,708,472	contains similarity to Pfam domain PF01529 DHHC zinc finger domain contains similarity to Interpro domain IPR001594 (Zinc finger, DHHC-type)
25	K06H6.5	K06H6.5	n/a	chrV 577,400	contains similarity to Pfam domain PF04590 Protein of unknown function, DUF595 contains similarity to Interpro domain IPR007669 (Protein of unknown function DUF595)
26	srh-235	F08E10.1	n/a	chrV 17,470,910	C. elegans SRH-235 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
27	C18G1.8	C18G1.8	n/a	chrV 4,765,470	contains similarity to Pfam domain PF01531 Glycosyl transferase family 11 contains similarity to Interpro domain IPR002516 (Glycosyl transferase, family 11)
28	nhr-83	F48G7.3	n/a	chrV 632,120	C. elegans NHR-83 protein; contains similarity to Pfam domains PF07914 (Protein of unknown function (DUF1679)) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR012877 (Protein of unknown function DUF1679, Caenorhabditis species), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core), IPR015897 (CHK kinase-like)
29	irk-2	M02A10.2	n/a	chrX 706,700	irk-2 encodes an inwardly rectifying potassium channel based on sequence homology to the the human potassium channel genes KCNJ1/KCNJ2.
30	Y57G11A.4	Y57G11A.4	n/a	chrIV 14,484,352	contains similarity to Interpro domain IPR005018 (DOMON related)
31	srh-37	R11G11.9	n/a	chrV 511,858	C. elegans SRH-37 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
32	C41C4.1	C41C4.1	n/a	chrII 8,106,208	contains similarity to Pfam domain PF04590 Protein of unknown function, DUF595 contains similarity to Interpro domain IPR007669 (Protein of unknown function DUF595)
33	acr-11	D2092.3	n/a	chrI 6,623,291	A homolog of an alpha type nicotinic acetylcholine receptor subunit involved in the mediation of fast synaptic transmission at neuromuscular junctions.
34	T22H9.1	T22H9.1	n/a	chrV 361,718	contains similarity to Pfam domain PF06102 Domain of unknown function (DUF947) contains similarity to Interpro domain IPR009292 (Protein of unknown function DUF947)
35	B0361.4	B0361.4	n/a	chrIII 7,263,665
36	W02D9.8	W02D9.8	n/a	chrI 12,558,734	contains similarity to Interpro domain IPR004692 (Preprotein translocase SecG subunit)
37	C50E3.2	C50E3.2	n/a	chrV 7,610,647	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domain IPR006583 (CW)
38	C06E4.4	C06E4.4	n/a	chrIV 7,259,079	contains similarity to Interpro domains IPR002424 (Insect alcohol dehydrogenase family), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR), IPR016040 (NAD(P)-binding)
39	C26C6.8	C26C6.8	n/a	chrI 7,504,574	contains similarity to Pfam domains PF07653 (Variant SH3 domain) (3), PF00018 (SH3 domain) (2)contains similarity to Interpro domains IPR001452 (Src homology-3), IPR000108 (Neutrophil cytosol factor 2), IPR011511 (Variant SH3)
40	fbxb-76	H02I12.2	n/a	chrIV 11,378,732	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
41	srw-60	T11F1.1	n/a	chrII 2,960,240	C. elegans SRW-60 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
42	T21B4.3	T21B4.3	n/a	chrII 12,495,897	contains similarity to Pfam domain PF01681 C6 domain contains similarity to Interpro domain IPR002601 (Protein of unknown function C6)
43	F54B11.4	F54B11.4	n/a	chrX 13,593,035	contains similarity to Neurospora crassa Hypothetical protein.; TR:Q8X031
44	cyp-25A6	K06B9.1	n/a	chrIV 4,197,909	C. elegans CYP-25A6 protein; contains similarity to Pfam domain PF00067 Cytochrome P450 contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR000044 (Mycoplasma lipoprotein (MG045))
45	C43H6.4	C43H6.4	n/a	chrX 2,405,689
46	R08C7.11	R08C7.11	n/a	chrIV 4,454,848
47	str-144	C09H5.5	n/a	chrV 8,071,381	C. elegans STR-144 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
48	ser-3	K02F2.6	n/a	chrI 6,821,820	ser-3 encodes a putative homolog of mammalian 5-HT4 metabotropic serotonin receptors; SER-3 is required for normal inhibition of movement by 5-HT, with ser-3 mutants being hyperactive and excessively curling their male tails (but this phenotype is reversed by exogenous 5-HT, with ser-3 mutants then becoming sluggish); SER-3 activity is required for normally high brood sizes and for embryonic development, and weakly required for pharyngeal pumping; SER-3 is expressed in pharynx, head and tail neurons, nerve ring, and intestine.
49	srsx-35	F53F8.2	n/a	chrV 20,677,605	C. elegans SRSX-35 protein; contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR013305 (ABC transporter, ABCB2), IPR000276 (GPCR, rhodopsin-like)
50	C26B2.5	C26B2.5	n/a	chrIV 8,040,889