UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	T22H6.1	T22H6.1	9.999999999999999e-131	chrX 12,768,557	contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2-type)
2	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
3	C04F12.1	C04F12.1	n/a	chrI 9,676,100	contains similarity to Pfam domain PF02171 Piwi domain contains similarity to Interpro domains IPR003165 (Stem cell self-renewal protein Piwi), IPR012337 (Polynucleotidyl transferase, Ribonuclease H fold)
4	K12B6.6	K12B6.6	n/a	chrV 6,294,114
5	T04C9.2	T04C9.2	n/a	chrIII 5,992,002
6	srbc-59	R09E12.1	n/a	chrV 779,433	C. elegans SRBC-59 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
7	str-254	F10A3.9	n/a	chrV 16,152,699	C. elegans STR-254 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
8	srh-207	ZK262.1	n/a	chrV 18,409,607	C. elegans SRH-207 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
9	F25H9.3	F25H9.3	n/a	chrV 13,456,608	contains similarity to Interpro domain IPR016054 (Ly-6 antigen / uPA receptor -like)
10	D1046.4	D1046.4	n/a	chrIV 8,935,680	contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domains IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
11	C53C7.3	C53C7.3	n/a	chrX 13,049,643	contains similarity to Triticum aestivum Alpha/beta-gliadin A-V precursor (Prolamin).; SW:GDA5_WHEAT
12	acl-2	T06E8.1	n/a	chrV 10,029,692	T06E8.1 is orthologous to the human gene 1-ACYLGLYCEROL-3-PHOSPHATE O-ACYLTRANSFERASE 2 (LYSOPHOSPHATIDIC ACID ACYLTRANSFERASE, BETA) (AGPAT2; OMIM:603100), which when mutated leads to disease; T06E8.1 protein is predicted to be mitochondrial.
13	srv-22	H04M03.9	n/a	chrIV 5,879,196	C. elegans SRV-22 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR002651 (Protein of unknown function DUF32)
14	ZC482.4	ZC482.4	n/a	chrIII 12,766,680	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
15	H16D19.3	H16D19.3	n/a	chrI 12,639,596	contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2-type)
16	clec-212	F19F10.7	n/a	chrV 7,566,626	C. elegans CLEC-212 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR001304 (C-type lectin)
17	F26E4.5	F26E4.5	n/a	chrI 9,769,984	F26E4.5 encodes an SH2 domain-containing tyrosine kinase related to the vertebrate FER non-receptor protein tyrosine kinase; loss of F26E4.5 activity in an RNAi-hypersensitive strain results in axon guidance defects indicating that F26E4.5 likely plays a role in regulation of axon navigation.
18	Y43F8C.6	Y43F8C.6	n/a	chrV 19,636,948	contains similarity to Interpro domains IPR001412 (Aminoacyl-tRNA synthetase, class I, conserved site), IPR009057 (Homeodomain-like)
19	C29G2.6	C29G2.6	n/a	chrV 2,584,386
20	C50B8.3	C50B8.3	n/a	chrV 13,567,762	contains similarity to Pfam domain PF08547 Complex I intermediate-associated protein 30 (CIA30) contains similarity to Interpro domain IPR013857 (NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30)
21	C25D7.9	C25D7.9	n/a	chrV 15,065,202
22	srh-190	C17E7.2	n/a	chrV 3,903,811	C. elegans SRH-190 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
23	fbxb-13	C08F1.3	n/a	chrII 1,789,688	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function.
24	ZK1053.6	ZK1053.6	n/a	chrI 13,239,621	ZK1053.6 encodes an ortholog of human SLC41A1 (OMIM:610801) and bacterial MgtE; like its orthologs, ZK1053.6 is predicted to transport Mg(2+) into cells; ZK1053.6 is paralogous to K07H8.2 and ZK185.2, and has no obvious function in mass RNAi assays.
25	set-24	Y43F11A.5	n/a	chrII 12,122,894	set-24 encodes a protein with an N-terminal SET domain, followed by two SPK domains; SET-24's domain organization resembles that of SET-5, but SET-24 has no known non-nematode orthologs or C. elegans paralogs; neither set-24(n4909) nor set-24(RNAi) have any obvious phenotypes.
26	F29A7.4	F29A7.4	n/a	chrII 2,750,080	contains similarity to Homo sapiens Uncharacterized protein C2orf32; ENSEMBL:ENSP00000263655
27	C18B2.2	C18B2.2	n/a	chrX 3,625,928	contains similarity to Pfam domain PF04590 Protein of unknown function, DUF595 contains similarity to Interpro domain IPR007669 (Protein of unknown function DUF595)
28	ZK1240.5	ZK1240.5	n/a	chrII 2,317,121	contains similarity to Interpro domain IPR000315 (Zinc finger, B-box)
29	ZK593.8	ZK593.8	n/a	chrIV 10,938,663	contains similarity to Pfam domains PF07719 (Tetratricopeptide repeat) , PF02661 (Fic protein family) contains similarity to Interpro domains IPR003812 (Filamentation induced by cAMP protein Fic), IPR011990 (Tetratricopeptide-like helical), IPR013105 (Tetratricopeptide TPR2), IPR013026 (Tetratricopeptide region)
30	F27E5.5	F27E5.5	n/a	chrII 10,129,961	contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
31	F46A8.6	F46A8.6	n/a	chrI 11,244,411	contains similarity to Homo sapiens hypothetical protein; ENSEMBL:ENSP00000352916
32	clec-242	Y68A4B.2	n/a	chrV 17,244,604	C. elegans CLEC-242 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
33	F35A5.5	F35A5.5	n/a	chrX 3,794,638	contains similarity to Interpro domains IPR000694 (Proline-rich region), IPR000976 (Wilm's tumour protein)
34	gcy-6	B0024.6	n/a	chrV 10,311,299	gcy-6 encodes a predicted guanylate cyclase; expressed in the ASEL neurons.
35	C09D4.2	C09D4.2	n/a	chrI 5,492,333
36	F37C4.7	F37C4.7	n/a	chrIV 3,878,770
37	ZK945.4	ZK945.4	n/a	chrII 10,104,330	contains similarity to Pfam domains PF00621 (RhoGEF domain) , PF00169 (PH domain) contains similarity to Interpro domains IPR000219 (Dbl homology (DH) domain), IPR001849 (Pleckstrin-like), IPR011993 (Pleckstrin homology-type), IPR015721 (Rho GTP exchange factor)
38	srh-46	T03F7.3	n/a	chrV 11,302,223	C. elegans SRH-46 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
39	F53G2.2	F53G2.2	n/a	chrII 2,483,921
40	nhr-208	R07B7.15	n/a	chrV 12,095,111	C. elegans NHR-208 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
41	srw-77	W06G6.8	n/a	chrV 16,642,725	C. elegans SRW-77 protein ;
42	str-6	T23D5.10	n/a	chrV 15,749,587	C. elegans STR-6 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR001991 (Sodium:dicarboxylate symporter)
43	E02H4.2	E02H4.2	n/a	chrX 14,279,950	contains similarity to Homo sapiens Type-1 protein phosphatase skeletal muscle glycogen targeting subunit; ENSEMBL:ENSP00000284601
44	T09E11.8	T09E11.8	n/a	chrI 12,351,698	contains similarity to Pfam domain PF01697 Domain of unknown function contains similarity to Interpro domain IPR008166 (Protein of unknown function DUF23)
45	bath-33	C08E3.3	n/a	chrII 1,605,408	C. elegans BATH-33 protein; contains similarity to Pfam domains PF00917 (MATH domain) , PF00651 (BTB/POZ domain) contains similarity to Interpro domains IPR002083 (MATH), IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ)
46	F28A10.7	F28A10.7	n/a	chrII 845,493	contains similarity to Interpro domain IPR013090 (Phospholipase A2, active site)
47	K11G9.3	K11G9.3	n/a	chrV 6,670,893	contains similarity to Pfam domain PF00135 Carboxylesterase contains similarity to Interpro domain IPR002018 (Carboxylesterase, type B)
48	ift-81	F32A6.2	n/a	chrX 5,302,501	C. elegans IFT-81 protein; contains similarity to Interpro domains IPR010989 (t-SNARE), IPR000533 (Tropomyosin)
49	K07G5.3	K07G5.3	n/a	chrI 7,163,733	contains similarity to Pfam domain PF00168 C2 domain contains similarity to Interpro domains IPR008973 (C2 calcium/lipid-binding region, CaLB), IPR000008 (C2 calcium-dependent membrane targeting)
50	srt-62	T27C10.2	n/a	chrI 10,900,411	C. elegans SRT-62 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)