UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	mdt-10	T09A5.6	1.0000000000000001e-66	chrII 7,854,378	C. elegans MDT-10 protein ; contains similarity to Homo sapiens Mediator of RNA polymerase II transcription subunit 10; ENSEMBL:ENSP00000255764
2	sra-25	T26E3.9	n/a	chrI 12,687,150	C. elegans SRA-25 protein; contains similarity to Pfam domain PF02117 C.elegans Sra family integral membrane protein contains similarity to Interpro domains IPR003945 (NADH-plastoquinone oxidoreductase, chain 5), IPR000344 (Nematode chemoreceptor, Sra)
3	F55A3.5	F55A3.5	n/a	chrI 10,782,421	contains similarity to Interpro domains IPR012336 (Thioredoxin-like fold), IPR012335 (Thioredoxin fold), IPR000889 (Glutathione peroxidase)
4	fbxa-181	F35E12.3	n/a	chrV 13,726,386	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
5	C38D4.9	C38D4.9	n/a	chrIII 4,803,842	contains similarity to Pfam domains PF01170 (Putative RNA methylase family UPF0020) , PF05175 (Methyltransferase small domain) , PF08242 (Methyltransferase domain) contains similarity to Interpro domains IPR007848 (Methyltransferase small), IPR000241 (Putative RNA methylase), IPR002296 (N6 adenine-specific DNA methyltransferase, N12 class), IPR013217 (Methyltransferase type 12), IPR002052 (N-6 adenine-specific DNA methylase, conserved site), IPR002723 (Protein of unknown function DUF43)
6	srj-8	T28A11.9	n/a	chrV 3,248,476	C. elegans SRJ-8 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
7	srh-215	T20B3.3	n/a	chrV 16,831,260	C. elegans SRH-215 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR001356 (Homeobox)
8	Y55H10A.2	Y55H10A.2	n/a	chrIV 3,364,812	contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
9	K10D2.5	K10D2.5	n/a	chrIII 5,172,994	contains similarity to Pfam domain PF00173 Cytochrome b5-like Heme/Steroid binding domain contains similarity to Interpro domain IPR001199 (Cytochrome b5)
10	T22C1.5	T22C1.5	n/a	chrI 7,941,375	contains similarity to Saccharomyces cerevisiae Iswi One Complex; SGD:YMR044W
11	C49H3.4	C49H3.4	n/a	chrIV 7,915,959	contains similarity to Pfam domain PF01423 LSM domain contains similarity to Interpro domains IPR001163 (Like-Sm ribonucleoprotein, core), IPR006649 (Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core), IPR014761 (UV excision repair protein Rad23, C-terminal), IPR010920 (Like-Sm ribonucleoprotein-related, core)
12	ZC53.1	ZC53.1	n/a	chrX 1,912,323
13	bath-36	Y75B12B.4	n/a	chrV 15,189,546	C. elegans BATH-36 protein; contains similarity to Pfam domain PF00651 BTB/POZ domain contains similarity to Interpro domains IPR002083 (MATH), IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ)
14	bath-19	F59H6.1	n/a	chrII 2,037,587	C. elegans BATH-19 protein; contains similarity to Pfam domains PF00651 (BTB/POZ domain) (3), PF00917 (MATH domain) contains similarity to Interpro domains IPR002083 (MATH), IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ)
15	F26A1.1	F26A1.1	n/a	chrIII 4,851,165
16	tsp-12	T14G10.6	n/a	chrIV 10,149,846	C. elegans TSP-12 protein; contains similarity to Pfam domain PF00335 Tetraspanin family contains similarity to Interpro domains IPR000301 (CD9/CD37/CD63 antigen), IPR008952 (Tetraspanin)
17	srh-308	F58E10.6	n/a	chrV 14,016,755	C. elegans SRH-308 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
18	C33H5.6	C33H5.6	n/a	chrIV 7,776,604	contains similarity to Pfam domain PF00400 WD domain, G-beta repeat contains similarity to Interpro domains IPR011046 (WD40 repeat-like), IPR001680 (WD40 repeat), IPR000664 (Lethal(2) giant larvae protein), IPR015943 (WD40/YVTN repeat-like)
19	D1007.4	D1007.4	n/a	chrI 4,580,304	contains similarity to Homo sapiens Gem-associated protein 6; ENSEMBL:ENSP00000281950
20	srh-45	T03F7.2	n/a	chrV 11,304,292	C. elegans SRH-45 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR002259 (Delayed-early response protein/equilibrative nucleoside transporter), IPR008075 (Lipocalin-1 receptor)
21	srh-201	R03H4.9	n/a	chrV 9,013,008	C. elegans SRH-201 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
22	srx-1	F59E11.1	n/a	chrV 9,004,313	C. elegans SRX-1 protein; contains similarity to Interpro domains IPR000366 (Fungal pheromone mating factor STE2 GPCR), IPR000276 (GPCR, rhodopsin-like)
23	R08H2.10	R08H2.10	n/a	chrV 15,373,870	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
24	Y56A3A.31	Y56A3A.31	n/a	chrIII 11,986,100	contains similarity to Interpro domain IPR001395 (Aldo/keto reductase)
25	C50E3.12	C50E3.12	n/a	chrV 7,621,252	contains similarity to Homo sapiens retinitis pigmentosa 1-like 1; ENSEMBL:ENSP00000371923
26	M01G12.5	M01G12.5	n/a	chrI 12,130,715	contains similarity to Interpro domain IPR000215 (Protease inhibitor I4, serpin)
27	M02B7.4	M02B7.4	n/a	chrIV 3,802,482	contains similarity to Pfam domain PF08660 Oligosaccharide biosynthesis protein Alg14 like contains similarity to Interpro domain IPR013969 (Oligosaccharide biosynthesis protein Alg14 like)
28	R11H6.4	R11H6.4	n/a	chrV 14,610,325	contains similarity to Homo sapiens Steerin3 protein; ENSEMBL:ENSP00000228327
29	F13E6.3	F13E6.3	n/a	chrX 10,681,621	contains similarity to Interpro domains IPR001965 (Zinc finger, PHD-type), IPR011011 (Zinc finger, FYVE/PHD-type)
30	T04D3.1	T04D3.1	n/a	chrI 13,303,528	contains similarity to Interpro domain IPR009057 (Homeodomain-like)
31	B0207.8	B0207.8	n/a	chrI 5,951,441
32	F02H6.4	F02H6.4	n/a	chrIV 14,217,678	contains similarity to Saccharomyces cerevisiae GTPase, required for general translation initiation by promoting Met-tRNAiMet binding to ribosomes and ribosomal subunit joining; homolog of bacterial IF2; SGD:YAL035W
33	srab-2	C04F5.5	n/a	chrV 5,104,023	C. elegans SRAB-2 protein; contains similarity to Pfam domain PF02175 C.elegans integral membrane protein Srb contains similarity to Interpro domains IPR001005 (SANT, DNA-binding), IPR002184 (Serpentine beta receptor), IPR007087 (Zinc finger, C2H2-type)
34	F29C4.4	F29C4.4	n/a	chrIV 111,769
35	F14H12.7	F14H12.7	n/a	chrX 4,362,080
36	T21C9.4	T21C9.4	n/a	chrV 10,578,742	contains similarity to Pfam domain PF01133 Enhancer of rudimentary contains similarity to Interpro domain IPR000781 (Enhancer of rudimentary)
37	R144.6	R144.6	n/a	chrIII 5,003,956	contains similarity to Pfam domain PF07857 CEO family (DUF1632) contains similarity to Interpro domain IPR012435 (Protein of unknown function DUF1632)
38	F42A6.5	F42A6.5	n/a	chrIV 3,331,304	contains similarity to Interpro domain IPR001357 (BRCT)
39	C29F9.12	C29F9.12	n/a	chrIII 121,876
40	F20C5.3	F20C5.3	n/a	chrIV 8,754,081	contains similarity to Interpro domain IPR000345 (Cytochrome c heme-binding site)
41	C46A5.8	C46A5.8	n/a	chrIV 7,769,193
42	F16H11.3	F16H11.3	n/a	chrX 4,648,333	contains similarity to Pfam domain PF01733 Nucleoside transporter contains similarity to Interpro domains IPR002259 (Delayed-early response protein/equilibrative nucleoside transporter), IPR016196 (MFS general substrate transporter)
43	F08B6.1	F08B6.1	n/a	chrI 6,760,893	contains similarity to Interpro domain IPR010916 (TonB box, conserved site)
44	K10C2.2	K10C2.2	n/a	chrX 6,433,006	contains similarity to Interpro domain IPR000832 (GPCR, family 2, secretin-like)
45	B0563.5	B0563.5	n/a	chrX 9,146,762
46	str-5	T23D5.12	n/a	chrV 15,753,810	C. elegans STR-5 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR001991 (Sodium:dicarboxylate symporter)
47	F38H4.10	F38H4.10	n/a	chrIV 11,861,497	contains similarity to Pfam domain PF03637 Mob1/phocein family contains similarity to Interpro domain IPR005301 (Mob1/phocein)
48	B0281.4	B0281.4	n/a	chrII 2,298,366	contains similarity to Pfam domain PF02214 K+ channel tetramerisation domain contains similarity to Interpro domains IPR011333 (BTB/POZ fold), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation)
49	ekl-5	Y26E6A.1	n/a	chrX 13,915,941	C. elegans EKL-5 protein; contains similarity to Interpro domains IPR001579 (Glycoside hydrolase, chitinase active site), IPR006642 (Zinc finger, Rad18-type putative)
50	JC8.4	JC8.4	n/a	chrIV 13,243,908	contains similarity to Pfam domain PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region contains similarity to Interpro domains IPR016192 (APOBEC/CMP deaminase, zinc-binding), IPR002125 (CMP/dCMP deaminase, zinc-binding), IPR016193 (Cytidine deaminase-like)