UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	T08G5.8	T08G5.8	6e-98	chrV 14,048,191	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
2	T23D5.8	T23D5.8	n/a	chrV 15,747,913	contains similarity to Interpro domain IPR000168 (Nematode 7TM chemoreceptor (probably olfactory))
3	nhr-187	F47C10.4	n/a	chrV 3,861,996	C. elegans NHR-187 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
4	fbxa-41	F52D2.1	n/a	chrX 1,949,939	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
5	C15H9.2	C15H9.2	n/a	chrX 6,119,566	contains similarity to Pfam domain PF00651 BTB/POZ domain contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ)
6	srg-32	T21C9.7	n/a	chrV 10,587,952	C. elegans SRG-32 protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
7	C05G5.5	C05G5.5	n/a	chrX 14,758,374	contains similarity to Homo sapiens hypothetical protein; ENSEMBL:ENSP00000360931
8	nhr-174	E03H4.6	n/a	chrI 12,418,082	C. elegans NHR-174 protein; contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2-type)
9	M01G12.10	M01G12.10	n/a	chrI 12,119,338	contains similarity to Homo sapiens Hypothetical protein KIAA0477; ENSEMBL:ENSP00000316434
10	sre-4	T13F2.5	n/a	chrIV 9,782,834	C. elegans SRE-4 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
11	R11D1.4	R11D1.4	n/a	chrV 12,713,623	contains similarity to Xenopus laevis Similar to kinesin-like 1.; TR:Q8AVK8
12	srz-48	F20E11.1	n/a	chrV 17,459,315	C. elegans SRZ-48 protein ;
13	ttx-3	C40H5.5	n/a	chrX 11,766,841	ttx-3 encodes a LIM homeodomain protein required for functions of the interneuron AIY, including thermosensory behavior and olfactory learning.
14	srw-35	T08G3.10	n/a	chrV 16,472,391	C. elegans SRW-35 protein; contains similarity to Pfam domain PF06976 Protein of unknown function (DUF1300) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR010726 (Protein of unknown function DUF1300), IPR000276 (GPCR, rhodopsin-like)
15	T21B6.4	T21B6.4	n/a	chrX 10,934,829	contains similarity to Interpro domain IPR003006 (Immunoglobulin/major histocompatibility complex, conserved site)
16	K12H6.2	K12H6.2	n/a	chrII 2,814,250
17	srsx-39	M01B2.9	n/a	chrV 15,255,926	C. elegans SRSX-39 protein; contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
18	Y62H9A.14	Y62H9A.14	n/a	chrX 11,922,107	contains similarity to Interpro domain IPR009010 (Aspartate decarboxylase-like fold)
19	T25B6.1	T25B6.1	n/a	chrX 9,040,675
20	C17H1.6	C17H1.6	n/a	chrI 13,131,624	contains similarity to Danio rerio Arginine and glutamate-rich protein 1-B.; SW:Q6P5L7
21	C14E2.6	C14E2.6	n/a	chrX 1,828,107	contains similarity to Pfam domain PF01764 Lipase (class 3) contains similarity to Interpro domain IPR002921 (Lipase, class 3)
22	C17H1.5	C17H1.5	n/a	chrI 13,115,023	contains similarity to Mus musculus Inner centromere protein.; SW:Q9WU62
23	F41H8.2	F41H8.2	n/a	chrV 827,588	contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
24	str-220	C42D4.9	n/a	chrIV 7,170,609	str-220 encodes a seven transmembrane chemoreceptor; microarray analyses indicate that str-220 is expressed at higher levels in the AWB olfactory neurons than the AFD thermosensory neurons; anatomical expression studies confirm expression in the AWB neurons; expression of str-220 in AWB is regulated, in part, by the KIN-29 Ser/Thr kinase.
25	C04F5.2	C04F5.2	n/a	chrV 5,094,981
26	C50E3.9	C50E3.9	n/a	chrV 7,599,821	contains similarity to Interpro domain IPR001991 (Sodium:dicarboxylate symporter)
27	F45F2.6	F45F2.6	n/a	chrV 8,527,305	contains similarity to Pfam domain PF03189 Protein of unknown function, DUF270 contains similarity to Interpro domain IPR004878 (Protein of unknown function DUF270)
28	Y38H6C.9	Y38H6C.9	n/a	chrV 20,516,299	contains similarity to Pfam domain PF01827 FTH domain contains similarity to Interpro domain IPR002900 (Protein of unknown function DUF38, Caenorhabditis species)
29	T24D5.4	T24D5.4	n/a	chrX 12,597,224	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
30	W09C3.3	W09C3.3	n/a	chrI 4,708,334	contains similarity to Pfam domain PF01482 Domain of unknown function DUF13 contains similarity to Interpro domain IPR002485 (Protein of unknown function DUF13)
31	srt-30	R08F11.2	n/a	chrV 3,799,527	C. elegans SRT-30 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR002651 (Protein of unknown function DUF32), IPR001991 (Sodium:dicarboxylate symporter)
32	K02E11.6	K02E11.6	n/a	chrV 14,251,141	contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)
33	F35E2.1	F35E2.1	n/a	chrI 11,739,734	contains similarity to Pfam domain PF06681 Protein of unknown function (DUF1182) contains similarity to Interpro domains IPR002091 (Aromatic amino acid permease), IPR010601 (Protein of unknown function DUF1182)
34	Y66A7A.7	Y66A7A.7	n/a	chrIII 11,629,581	contains similarity to Lactobacillus plantarum Hypothetical protein.; TR:Q88VI8
35	C24A11.5	C24A11.5	n/a	chrI 5,385,191
36	B0284.3	B0284.3	n/a	chrIII 4,380,175	contains similarity to Interpro domain IPR000215 (Protease inhibitor I4, serpin)
37	F45E12.6	F45E12.6	n/a	chrII 7,313,979
38	F02C12.4	F02C12.4	n/a	chrX 13,393,433	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
39	hlh-10	ZK682.4	n/a	chrV 9,281,043	C. elegans HLH-10 protein; contains similarity to Pfam domain PF00010 Helix-loop-helix DNA-binding domain contains similarity to Interpro domains IPR001092 (Basic helix-loop-helix dimerisation region bHLH), IPR011598 (Helix-loop-helix DNA-binding)
40	srg-41	T19C4.3	n/a	chrV 11,161,148	C. elegans SRG-41 protein; contains similarity to Interpro domains IPR000500 (Connexins), IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
41	sru-40	R07B5.3	n/a	chrV 9,833,347	C. elegans SRU-40 protein; contains similarity to Pfam domain PF02688 Domain of unknown function DUF215 contains similarity to Interpro domain IPR003839 (Protein of unknown function DUF215)
42	sre-51	C50E10.10	n/a	chrII 12,312,675	C. elegans SRE-51 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
43	F58G11.4	F58G11.4	n/a	chrV 13,674,239	contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domains IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
44	F52E10.2	F52E10.2	n/a	chrX 16,282,921	contains similarity to Borrelia burgdorferi EppA.; TR:Q840B4
45	T05B9.2	T05B9.2	n/a	chrII 11,257,607	contains similarity to Rattus norvegicus Fibrillin-2.; TR:Q9WUH9
46	srsx-17	F58D7.1	n/a	chrV 5,929,015	C. elegans SRSX-17 protein; contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
47	nas-10	K09C8.3	n/a	chrX 10,962,779	nas-10 encodes an astacin-like metalloprotease.
48	srxa-7	C31A11.6	n/a	chrV 16,308,625	C. elegans SRXA-7 protein; contains similarity to Pfam domain PF03383 Caenorhabditis serpentine receptor-like protein, class xa contains similarity to Interpro domain IPR005047 (Protein of unknown function DUF286, G protein-coupled receptor-like putative Caenorhabditis species)
49	F20E11.5	F20E11.5	n/a	chrV 17,461,590	contains similarity to Pfam domain PF03436 Domain of unknown function (DUF281) contains similarity to Interpro domain IPR005098 (Protein of unknown function DUF281)
50	R119.2	R119.2	n/a	chrI 370,004	contains similarity to Pfam domain PF00557 metallopeptidase family M24 contains similarity to Interpro domains IPR000994 (Peptidase M24, catalytic core), IPR001714 (Peptidase M24, methionine aminopeptidase)