UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	T07E3.2	T07E3.2	7.999999999999999e-42	chrIII 6,907,721
2	skr-9	C52D10.7	n/a	chrIV 17,163,837	skr-9 encodes a homolog of Skp1 in S. cerevisiae, a component of the SCF (Skp1, Cullin, F-box) ubiquitin-ligase complex that regulates ubiquitin-mediated protein degradation; SKR-9 is required for posterior body morphogenesis, embryonic and larval development, and postembryonic cell proliferation.
3	D2062.7	D2062.7	n/a	chrII 2,617,140
4	F43G9.8	F43G9.8	n/a	chrI 8,618,137	contains similarity to Dugesia japonica DjFGFR1.; TR:Q8MY86
5	R02F2.5	R02F2.5	n/a	chrIII 5,479,799	contains similarity to Interpro domains IPR003267 (Small proline-rich), IPR000694 (Proline-rich region)
6	F54D1.1	F54D1.1	n/a	chrIV 11,262,424	contains similarity to Interpro domain IPR004087 (K Homology)
7	F35E2.5	F35E2.5	n/a	chrI 11,742,773	contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316) contains similarity to Interpro domain IPR005514 (Protein of unknown function DUF316)
8	ZK1225.5	ZK1225.5	n/a	chrI 13,217,724
9	W01B6.5	W01B6.5	n/a	chrIV 10,077,459	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif)
10	ZK84.5	ZK84.5	n/a	chrII 6,016,343
11	K10D6.3	K10D6.3	n/a	chrV 11,201,218	contains similarity to Homo sapiens HMG-BOX transcription factor BBX; ENSEMBL:ENSP00000319742
12	F46A9.2	F46A9.2	n/a	chrI 9,459,902	contains similarity to Saccharomyces cerevisiae part of small (ribosomal) subunit (SSU) processosome (contains U3 snoRNA); similar to microtubule binding proteins and to X90565_5.cds; SGD:YLR197W
13	rmd-5	T23B3.3	n/a	chrI 6,711,598	C. elegans RMD-5 protein ; contains similarity to Xenopus laevis Protein FAM82C.; SW:Q5EAU9
14	C17C3.5	C17C3.5	n/a	chrII 5,552,099	contains similarity to Pfam domain PF01827 FTH domain contains similarity to Interpro domain IPR002900 (Protein of unknown function DUF38, Caenorhabditis species)
15	T13F2.12	T13F2.12	n/a	chrIV 9,765,986	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
16	C02F5.2	C02F5.2	n/a	chrIII 8,249,732
17	F38A5.6	F38A5.6	n/a	chrIV 6,596,738	contains similarity to Pfam domain PF03114 BAR domain contains similarity to Interpro domain IPR004148 (BAR)
18	M03E7.3	M03E7.3	n/a	chrV 5,615,596
19	B0496.6	B0496.6	n/a	chrIV 7,419,545	contains similarity to Pfam domain PF03134 TB2/DP1, HVA22 family contains similarity to Interpro domain IPR004345 (TB2/DP1 and HVA22 related protein)
20	C17C3.11	C17C3.11	n/a	chrII 5,538,392	contains similarity to Interpro domains IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core)
21	C15H11.1	C15H11.1	n/a	chrV 14,394,129	contains similarity to Pfam domains PF02931 (Neurotransmitter-gated ion-channel ligand binding domain) , PF02932 (Neurotransmitter-gated ion-channel transmembrane region) contains similarity to Interpro domains IPR002394 (Nicotinic acetylcholine receptor, N-terminal), IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding), IPR006029 (Neurotransmitter-gated ion-channel transmembrane region)
22	Y40H4A.2	Y40H4A.2	n/a	chrV 14,584,349	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
23	T21E3.2	T21E3.2	n/a	chrI 3,931,189	contains similarity to Homo sapiens 55 kDa protein; ENSEMBL:ENSP00000273725
24	K02F6.3	K02F6.3	n/a	chrII 2,547,902	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domain IPR003125 (Protein of unknown function WSN)
25	Y75B8A.23	Y75B8A.23	n/a	chrIII 12,250,714	contains similarity to Homo sapiens Hypothetical protein; ENSEMBL:ENSP00000299601
26	C48B6.4	C48B6.4	n/a	chrI 6,890,348	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domain IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)
27	K11H3.2	K11H3.2	n/a	chrIII 9,846,887	contains similarity to Homo sapiens Uveal autoantigen; ENSEMBL:ENSP00000314556
28	srv-12	T04B2.4	n/a	chrIV 10,052,440	C. elegans SRV-12 protein ;
29	F44G4.5	F44G4.5	n/a	chrII 8,999,996	contains similarity to Anabaena sp Endopeptidase Clp ATP-binding chain B.; TR:Q8YM56
30	dsl-5	F58B3.8	n/a	chrIV 11,620,190	dsl-5 encodes a putative secreted protein with single DSL and EGF domains in series, somewhat like Delta/LAG-2; DSL-5 belongs to a nematode-specific family of Delta/LAG-2-like proteins that includes DSL-1, -2, -3, -5, -6, and -7.
31	R04B5.1	R04B5.1	n/a	chrV 10,078,069	contains similarity to Culex nigripalpus baculovirus Putative 33 kDa early protein (CUN014 similar to AcMNPV ORF92).; TR:Q99GP2
32	F22B5.5	F22B5.5	n/a	chrII 8,453,880	contains similarity to Pfam domain PF06852 Protein of unknown function (DUF1248) contains similarity to Interpro domain IPR009658 (Protein of unknown function DUF1248)
33	col-151	AC3.6	n/a	chrV 10,394,349	C. elegans COL-151 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) (2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat)
34	T27A8.4	T27A8.4	n/a	chrX 16,067,184	contains similarity to Saccharomyces cerevisiae Involved in protein transport at multiple stages of the secretory pathway; SGD:YDR170C
35	D2062.6	D2062.6	n/a	chrII 2,619,582	contains similarity to Interpro domain IPR000104 (Antifreeze protein, type I)
36	C05D2.3	C05D2.3	n/a	chrIII 5,616,047	C05D2.3 generally resembles aromatic-L-amino-acid/L-histidine decarboxylases; however, its predicted protein sequence lacks six residues critical for AADC function; C05D2.3 is dispensable in mass RNAi assays.
37	F23C8.1	F23C8.1	n/a	chrI 2,447,555
38	F28H1.5	F28H1.5	n/a	chrI 3,979,010
39	scrm-8	K08D10.7	n/a	chrIV 4,165,432	scrm-8 encodes a putative phospholipid scramblase required for normally short lifespan; SCRM-8 is homologous to human PLSCR1-5, and paralogous to other C. elegans SCRMs (e.g., SCRM-1).
40	tba-6	F32H2.9	n/a	chrI 8,996,289	C. elegans TBA-6 protein; contains similarity to Pfam domains PF00091 (Tubulin/FtsZ family, GTPase domain) , PF03953 (Tubulin/FtsZ family, C-terminal domain) contains similarity to Interpro domains IPR002454 (Gamma tubulin), IPR002452 (Alpha tubulin), IPR002453 (Beta tubulin), IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase), IPR004057 (Epsilon tubulin), IPR002967 (Delta tubulin), IPR000158 (Cell division protein FtsZ, N-terminal), IPR008280 (Tubulin/FtsZ, C-terminal)
41	C09B9.4	C09B9.4	n/a	chrIV 5,032,484	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
42	C09D4.6	C09D4.6	n/a	chrI 5,486,821
43	ZC477.2	ZC477.2	n/a	chrIV 7,109,050	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
44	W06D4.3	W06D4.3	n/a	chrI 9,059,663	contains similarity to Pfam domain PF03114 BAR domain contains similarity to Interpro domain IPR004148 (BAR)
45	ZK1307.3	ZK1307.3	n/a	chrII 9,652,584	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
46	W03D8.5	W03D8.5	n/a	chrI 2,817,203	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
47	Y43F8C.9	Y43F8C.9	n/a	chrV 19,646,679	contains similarity to Dictyostelium discoideum Myb-like protein.; SW:P34127
48	clec-153	F10F2.8	n/a	chrIII 4,636,376	C. elegans CLEC-153 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
49	C18H2.4	C18H2.4	n/a	chrIII 7,697,463	C18H2.4 is orthologous to the human gene GLOMULIN (FAP48; OMIM:601749), which when mutated leads to disease.
50	srbc-3	F35F10.2	n/a	chrV 3,309,077	C. elegans SRBC-3 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)