UCSC C. elegans Gene Sorter

JavaScript is disabled in your web browser

You must have JavaScript enabled in your web browser to use the Genome Browser

UCSC C. elegans Gene Sorter

genome assembly search

sort by display output

#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	K09C8.2	K09C8.2	3e-106	chrX 10,960,143	contains similarity to Homo sapiens Splice isoform Long of P30411 B2 bradykinin receptor; ENSEMBL:ENSP00000307713
2	F25E5.3	F25E5.3	n/a	chrV 7,452,291	contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316) contains similarity to Interpro domains IPR001254 (Peptidase S1 and S6, chymotrypsin/Hap), IPR005514 (Protein of unknown function DUF316), IPR009003 (Peptidase, trypsin-like serine and cysteine)
3	F48G7.9	F48G7.9	n/a	chrV 628,338	contains similarity to Pfam domain PF00130 Phorbol esters/diacylglycerol binding domain (C1 domain) contains similarity to Interpro domains IPR015727 (Protein kinase C mu-related), IPR002219 (Protein kinase C, phorbol ester/diacylglycerol binding)
4	F46A8.5	F46A8.5	n/a	chrI 11,240,086	contains similarity to Pfam domain PF00337 Galactoside-binding lectin contains similarity to Interpro domains IPR001079 (Galectin, galactose-binding lectin), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup), IPR008985 (Concanavalin A-like lectin/glucanase)
5	clec-126	W09G10.5	n/a	chrII 3,519,952	C. elegans CLEC-126 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
6	sri-37	D2062.2	n/a	chrII 2,630,401	C. elegans SRI-37 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
7	C09G12.5	C09G12.5	n/a	chrIV 3,479,529
8	try-8	F25E5.10	n/a	chrV 7,453,613	C. elegans TRY-8 protein; contains similarity to Pfam domains PF00089 (Trypsin) , PF03761 (Domain of unknown function (DUF316)) contains similarity to Interpro domains IPR002195 (Dihydroorotase, conserved site), IPR001254 (Peptidase S1 and S6, chymotrypsin/Hap), IPR005514 (Protein of unknown function DUF316), IPR009003 (Peptidase, trypsin-like serine and cysteine)
9	C16C8.10	C16C8.10	n/a	chrII 3,464,412
10	nas-28	F42A10.8	n/a	chrIII 6,182,093	C. elegans NAS-28 protein; contains similarity to Pfam domain PF01400 Astacin (Peptidase family M12A) contains similarity to Interpro domains IPR017050 (Peptidase M12A, astacin, nematode), IPR006025 (Peptidase M, neutral zinc metallopeptidases, zinc-binding site), IPR001506 (Peptidase M12A, astacin), IPR006026 (Peptidase, metallopeptidases), IPR000859 (CUB), IPR013032 (EGF-like region, conserved site)
11	clec-221	F17C11.5	n/a	chrV 10,953,943	C. elegans CLEC-221 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
12	clec-136	F35D11.7	n/a	chrII 4,616,077	C. elegans CLEC-136 protein; contains similarity to Interpro domain IPR016187 (C-type lectin fold)
13	T21D12.7	T21D12.7	n/a	chrIV 290,077	contains similarity to Pfam domain PF00014 Kunitz/Bovine pancreatic trypsin inhibitor domain contains similarity to Interpro domains IPR002223 (Proteinase inhibitor I2, Kunitz metazoa), IPR013090 (Phospholipase A2, active site), IPR006150 (Cysteine-rich repeat)
14	fipr-16	C06E1.6	n/a	chrIII 8,590,815	C. elegans FIPR-16 protein ;
15	try-5	K07B1.1	n/a	chrV 9,347,867	C. elegans TRY-5 protein; contains similarity to Pfam domain PF00089 Trypsin contains similarity to Interpro domains IPR001314 (Peptidase S1A, chymotrypsin), IPR001254 (Peptidase S1 and S6, chymotrypsin/Hap), IPR009003 (Peptidase, trypsin-like serine and cysteine)
16	F41B4.3	F41B4.3	n/a	chrX 6,835,782
17	K12H6.4	K12H6.4	n/a	chrII 2,823,987
18	D1022.2	D1022.2	n/a	chrII 7,459,718	contains similarity to Interpro domain IPR000884 (Thrombospondin, type I)
19	C16C8.7	C16C8.7	n/a	chrII 3,459,961
20	F18E9.7	F18E9.7	n/a	chrX 8,596,390
21	D2096.5	D2096.5	n/a	chrIV 8,359,422
22	C16C8.9	C16C8.9	n/a	chrII 3,462,897
23	clec-207	F36F12.5	n/a	chrV 2,096,664	C. elegans CLEC-207 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
24	nas-19	K03B8.5	n/a	chrV 11,402,129	nas-19 encodes an astacin-like metalloprotease; large-scale expression studies reveal that a nas-19::GFP promoter fusion is expressed in the pharynx, intestine, vulva, and reproductive system.
25	clec-232	F36G9.11	n/a	chrV 15,976,833	C. elegans CLEC-232 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
26	clec-106	Y18D10A.12	n/a	chrI 12,866,497	C. elegans CLEC-106 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
27	clec-208	F36F12.6	n/a	chrV 2,098,548	C. elegans CLEC-208 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
28	K12H6.8	K12H6.8	n/a	chrII 2,828,347
29	clec-137	F35D11.8	n/a	chrII 4,617,642	C. elegans CLEC-137 protein; contains similarity to Interpro domain IPR016187 (C-type lectin fold)
30	srj-8	T28A11.9	n/a	chrV 3,248,476	C. elegans SRJ-8 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
31	F46A8.3	F46A8.3	n/a	chrI 11,243,122	contains similarity to Pfam domain PF00337 Galactoside-binding lectin contains similarity to Interpro domains IPR001079 (Galectin, galactose-binding lectin), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup), IPR008985 (Concanavalin A-like lectin/glucanase)
32	C28C12.3	C28C12.3	n/a	chrIV 8,490,521	contains similarity to Pfam domain PF02520 Domain of unknown function DUF148 contains similarity to Interpro domain IPR003677 (Protein of unknown function DUF148)
33	R107.2	R107.2	n/a	chrIII 9,044,850	contains similarity to Pfam domain PF01256 Carbohydrate kinase contains similarity to Interpro domain IPR000631 (Carbohydrate kinase)
34	Y44E3B.2	Y44E3B.2	n/a	chrI 3,261,991	contains similarity to Pfam domain PF00264 Common central domain of tyrosinase contains similarity to Interpro domains IPR008922 (Di-copper centre-containing), IPR002227 (Tyrosinase)
35	K11D12.6	K11D12.6	n/a	chrV 5,034,830	K11D12.6 encodes a putative serine protease inhibitor, with no obvious non-nematode orthologs but multiple C. elegans paralogs; K11D12.6 antagonizes CEP-1- and HUS-1-dependent germline apoptosis, as do BMK-1, RAD-50, and RAD-51.
36	ZK380.2	ZK380.2	n/a	chrX 1,633,167	contains similarity to Interpro domain IPR011072 (HR1 rho-binding repeat)
37	T02H6.9	T02H6.9	n/a	chrII 679,356	contains similarity to Pfam domain PF03762 Vitelline membrane outer layer protein I (VOMI) contains similarity to Interpro domain IPR005515 (Vitelline membrane outer layer protein I (VOMI))
38	F19H6.5	F19H6.5	n/a	chrX 12,364,231	contains similarity to Homo sapiens Splice isoform 1 of O75143 Hypothetical protein KIAA0652; ENSEMBL:ENSP00000310321
39	K04H8.3	K04H8.3	n/a	chrI 14,256,314	contains similarity to Bacteroides thetaiotaomicron Putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismatesmutase.; TR:Q8A0T7
40	F55C12.6	F55C12.6	n/a	chrII 5,875,271	contains similarity to Pfam domain PF06852 Protein of unknown function (DUF1248) contains similarity to Interpro domain IPR009658 (Protein of unknown function DUF1248)
41	T02D1.7	T02D1.7	n/a	chrIV 17,406,968	contains similarity to Rhizobium meliloti Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenasescomplex (EC 2.3.1.12) (E2).; SW:ODP2_RHIME
42	Y43F8C.17	Y43F8C.17	n/a	chrV 19,712,303	contains similarity to Rhodosporidium toruloides Rhodotorucine A precursor 2.; SW:RHT2_RHOTO
43	F49F1.11	F49F1.11	n/a	chrIV 4,140,539	contains similarity to Pfam domain PF00337 Galactoside-binding lectin contains similarity to Interpro domains IPR001079 (Galectin, galactose-binding lectin), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup), IPR008985 (Concanavalin A-like lectin/glucanase)
44	F59A1.6	F59A1.6	n/a	chrV 17,685,618	contains similarity to Brachydanio rerio SI:dZ186F8.4 (Novel immune-type receptor) (Fragment).; TR:Q8UVA1
45	clec-197	C49C3.12	n/a	chrIV 17,346,086	C. elegans CLEC-197 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
46	nas-17	K03B8.2	n/a	chrV 11,399,699	nas-17 encodes an astacin-like metalloprotease.
47	clec-125	W09G10.6	n/a	chrII 3,517,674	C. elegans CLEC-125 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
48	B0228.8	B0228.8	n/a	chrII 7,760,555
49	Y43F8C.16	Y43F8C.16	n/a	chrV 19,710,255	contains similarity to Drosophila melanogaster Flybase gene name is CG31439-PA;; FLYBASE:CG31439
50	K06A4.2	K06A4.2	n/a	chrV 9,487,363	contains similarity to Pfam domains PF00293 (NUDIX domain) , PF05026 (Dcp2, box A domain) contains similarity to Interpro domains IPR015797 (NUDIX), IPR007722 (Dcp2, box A), IPR000086 (NUDIX hydrolase, core)