UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	K04D7.4	K04D7.4	0	chrIV 10,189,101	contains similarity to Pfam domains PF00047 (Immunoglobulin domain) , PF00041 (Fibronectin type III domain) (3), PF00102 (Protein-tyrosine phosphatase) contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR008957 (Fibronectin, type III-like fold), IPR003961 (Fibronectin, type III), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR007110 (Immunoglobulin-like), IPR000387 (Protein-tyrosine phosphatase), IPR003599 (Immunoglobulin subtype), IPR003962 (Fibronectin, type III subdomain), IPR013151 (Immunoglobulin)
2	R107.2	R107.2	n/a	chrIII 9,044,850	contains similarity to Pfam domain PF01256 Carbohydrate kinase contains similarity to Interpro domain IPR000631 (Carbohydrate kinase)
3	Y63D3A.4	Y63D3A.4	n/a	chrI 14,099,306	contains similarity to Pfam domain PF03372 Endonuclease/Exonuclease/phosphatase family contains similarity to Interpro domains IPR005637 (TAP, C-terminal), IPR009060 (UBA-like), IPR005135 (Endonuclease/exonuclease/phosphatase)
4	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
5	srd-44	F17A2.8	n/a	chrX 12,339,267	C. elegans SRD-44 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
6	F53H2.3	F53H2.3	n/a	chrV 20,399,182	contains similarity to Interpro domain IPR006034 (Asparaginase/glutaminase)
7	Y4C6B.5	Y4C6B.5	n/a	chrIV 5,322,131	contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domains IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
8	srd-46	F17A2.10	n/a	chrX 12,332,621	C. elegans SRD-46 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
9	C07A4.3	C07A4.3	n/a	chrX 10,175,118	contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1 related)
10	R03H4.1	R03H4.1	n/a	chrV 9,018,100	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domain IPR002656 (Acyltransferase 3)
11	nhr-118	F13A2.8	n/a	chrV 4,408,904	C. elegans NHR-118 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core), IPR000003 ()
12	K04H8.2	K04H8.2	n/a	chrI 14,254,220	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domains IPR006583 (CW), IPR016187 (C-type lectin fold), IPR001304 (C-type lectin)
13	F53E10.5	F53E10.5	n/a	chrV 2,597,474
14	Y49F6C.2	Y49F6C.2	n/a	chrII 3,379,231
15	W10D9.2	W10D9.2	n/a	chrII 451,150	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
16	clec-19	F36H5.6	n/a	chrII 1,744,331	C. elegans CLEC-19 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR002345 (Lipocalin), IPR000859 (CUB), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
17	C17B7.7	C17B7.7	n/a	chrV 3,326,895	contains similarity to Pfam domain PF06869 Protein of unknown function (DUF1258) contains similarity to Interpro domain IPR009667 (Protein of unknown function DUF1258)
18	Y38H6C.8	Y38H6C.8	n/a	chrV 20,510,594	contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR002350 (Proteinase inhibitor I1, Kazal), IPR003990 (Pancreatitis-associated protein), IPR002352 (Eosinophil major basic protein), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
19	ZK682.7	ZK682.7	n/a	chrV 9,291,373
20	K09E2.2	K09E2.2	n/a	chrX 8,677,297
21	clec-122	Y25C1A.3	n/a	chrII 3,107,043	C. elegans CLEC-122 protein; contains similarity to Interpro domains IPR000104 (Antifreeze protein, type I), IPR003983 (Leukotriene B4 type 1 receptor), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
22	Y38H6A.2	Y38H6A.2	n/a	chrV 20,325,833	contains similarity to Chlamydia pneumoniae Hypothetical protein CPn0168.; TR:Q9Z916
23	K09E3.5	K09E3.5	n/a	chrX 17,109,938	contains similarity to Pfam domain PF03353 DUF278 contains similarity to Interpro domain IPR005020 (Protein of unknown function DUF278)
24	R06B9.2	R06B9.2	n/a	chrII 13,767,269	contains similarity to Pfam domain PF00339 Arrestin (or S-antigen), N-terminal domain contains similarity to Interpro domains IPR014756 (Immunoglobulin E-set), IPR011021 (Arrestin-like, N-terminal)
25	R12B2.3	R12B2.3	n/a	chrIII 5,806,220
26	glb-10	C29F5.7	n/a	chrII 6,308,800	glb-10 encodes a globin; glb-10 is expressed in pharynx, intestine, vulval muscle, and many neurons, with at least some subcellular localization to synapses; however, glb-10 has no obvious function in mass RNAi assays.
27	srw-26	T05G11.3	n/a	chrV 15,931,865	C. elegans SRW-26 protein; contains similarity to Pfam domain PF06976 Protein of unknown function (DUF1300) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR010726 (Protein of unknown function DUF1300)
28	W02A2.5	W02A2.5	n/a	chrIV 13,344,491	contains similarity to Interpro domains IPR000589 (Ribosomal protein S15), IPR015683 (Glutamate receptor-related), IPR001508 (NMDA receptor)
29	rps-8	F42C5.8	n/a	chrIV 7,313,435	rps-8 encodes a small ribosomal subunit S8 protein; by homology, RPS-8 is predicted to function in protein biosynthesis; in C. elegans, RPS-8 activity is required for germline development and the overall health of the animal.
30	C05D9.3	C05D9.3	n/a	chrX 1,114,346	contains similarity to Pfam domain PF07974 EGF-like domain contains similarity to Interpro domains IPR002369 (Integrin beta subunit, N-terminal), IPR001169 (Integrin beta subunit, C-terminal), IPR015812 (Integrin beta subunit), IPR003659 (Plexin/semaphorin/integrin), IPR013032 (EGF-like region, conserved site), IPR013111 (EGF, extracellular)
31	set-5	C47E8.8	n/a	chrV 14,702,283	set-5 encodes a large (1,675-residue) protein with an N-terminal SET domain and a C-terminal SPK domain; SET-5 has no non-nematode orthologs, but is paralogous to Y57A10A.1; SET-5's domain organization resembles that of SET-24; neither set-5(ok1568) nor set-5(RNAi) have any obvious phenotypes.
32	srj-9	T20C4.1	n/a	chrV 3,432,956	C. elegans SRJ-9 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
33	nhr-276	Y71A12C.1	n/a	chrI 14,042,539	C. elegans NHR-276 protein; contains similarity to Pfam domain PF00104 Ligand-binding domain of nuclear hormone receptor contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
34	F09C11.1	F09C11.1	n/a	chrIV 543,658
35	T26G10.3	T26G10.3	n/a	chrIII 9,413,048	contains similarity to Pfam domain PF01282 Ribosomal protein S24e contains similarity to Interpro domain IPR001976 (Ribosomal protein S24e)
36	M01G5.3	M01G5.3	n/a	chrIII 1,513,690	contains similarity to Pfam domain PF07851 TMPIT-like protein contains similarity to Interpro domain IPR012926 (TMPIT-like)
37	ZC116.1	ZC116.1	n/a	chrV 12,610,320	contains similarity to Interpro domain IPR001419 (HMW glutenin)
38	C17A2.5	C17A2.5	n/a	chrII 3,834,625	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domain IPR002656 (Acyltransferase 3)
39	R07B1.8	R07B1.8	n/a	chrX 9,871,676
40	R11.3	R11.3	n/a	chrX 16,198,339	contains similarity to Haemophilus influenzae Hypothetical protein HI0386.; SW:YBGC_HAEIN
41	srj-22	F28H7.1	n/a	chrV 10,743,082	C. elegans SRJ-22 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
42	C24G7.1	C24G7.1	n/a	chrI 4,110,897	contains similarity to Pfam domain PF00858 Amiloride-sensitive sodium channel contains similarity to Interpro domain IPR001873 (Na+ channel, amiloride-sensitive)
43	C05E11.2	C05E11.2	n/a	chrX 4,587,427
44	C33A11.2	C33A11.2	n/a	chrX 15,367,917	contains similarity to Drosophila melanogaster Flybase gene name is CG4025-PA;; FLYBASE:CG4025
45	F09E10.6	F09E10.6	n/a	chrX 1,496,339
46	C32B5.7	C32B5.7	n/a	chrII 962,400	contains similarity to Pfam domain PF00112 Papain family cysteine protease contains similarity to Interpro domains IPR013128 (Peptidase C1A, papain), IPR000668 (Peptidase C1A, papain C-terminal)
47	gcy-27	C06A12.4	n/a	chrIV 17,436,419	C. elegans GCY-27 protein; contains similarity to Pfam domains PF00211 (Adenylate and Guanylate cyclase catalytic domain) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001054 (Adenylyl cyclase class-3/4/guanylyl cyclase), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
48	srbc-58	R09E12.2	n/a	chrV 776,135	C. elegans SRBC-58 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
49	clec-128	W10G11.6	n/a	chrII 3,570,162	C. elegans CLEC-128 protein; contains similarity to Interpro domains IPR003566 (T-cell surface glycoprotein CD5), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
50	str-238	R09E12.4	n/a	chrV 768,810	C. elegans STR-238 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)