UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	K03H1.9	K03H1.9	5e-53	chrIII 9,941,014	contains similarity to Homo sapiens DAN15 protein; TR:Q99491
2	C24D10.1	C24D10.1	n/a	chrIV 5,167,373	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
3	M110.7	M110.7	n/a	chrII 8,235,210	contains similarity to Pfam domain PF01237 Oxysterol-binding protein contains similarity to Interpro domain IPR000648 (Oxysterol-binding protein)
4	C32D5.4	C32D5.4	n/a	chrII 6,322,171
5	Y57G11C.14	Y57G11C.14	n/a	chrIV 14,800,135	contains similarity to Saccharomyces cerevisiae Helicase encoded by the Y' element of subtelomeric regions, highly expressed in the mutants lacking the telomerase component TLC1; potentially phosphorylated by Cdc28p; SGD:YLR467W
6	ech-3	F43H9.1	n/a	chrV 8,022,781	C. elegans ECH-3 protein; contains similarity to Pfam domain PF00378 Enoyl-CoA hydratase/isomerase family contains similarity to Interpro domain IPR001753 (Crotonase, core)
7	C27B7.6	C27B7.6	n/a	chrIV 8,904,670	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR000694 (Proline-rich region), IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
8	W01B11.1	W01B11.1	n/a	chrI 3,300,049	contains similarity to Interpro domain IPR000694 (Proline-rich region)
9	kin-26	T06C10.6	n/a	chrIV 7,876,748	C. elegans KIN-26 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
10	clec-142	K01C8.8	n/a	chrII 8,279,792	C. elegans CLEC-142 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR001304 (C-type lectin)
11	ZC581.7	ZC581.7	n/a	chrI 6,661,388	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
12	C08E8.3	C08E8.3	n/a	chrV 18,351,418	contains similarity to Clostridium perfringens Probable Ser-type protease.; TR:Q8XHC4
13	C04E6.5	C04E6.5	n/a	chrV 5,903,504	contains similarity to Pfam domain PF00443 Ubiquitin carboxyl-terminal hydrolase contains similarity to Interpro domain IPR001394 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2)
14	C26B2.2	C26B2.2	n/a	chrIV 8,021,582
15	C18H7.7	C18H7.7	n/a	chrIV 596,081
16	W06F12.3	W06F12.3	n/a	chrIII 13,735,661	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
17	F58G1.9	F58G1.9	n/a	chrII 12,924,971	contains similarity to Homo sapiens Adapter-related protein complex 4 mu 1 subunit; SW:O00189
18	T10E9.6	T10E9.6	n/a	chrI 6,529,637	contains similarity to Pfam domain PF03134 TB2/DP1, HVA22 family contains similarity to Interpro domain IPR004345 (TB2/DP1 and HVA22 related protein)
19	T08H10.1	T08H10.1	n/a	chrV 4,484,972	contains similarity to Pfam domain PF00248 Aldo/keto reductase family contains similarity to Interpro domain IPR001395 (Aldo/keto reductase)
20	K01D12.15	K01D12.15	n/a	chrV 12,386,487	contains similarity to Interpro domains IPR001859 (Ribosomal protein P2), IPR000976 (Wilm's tumour protein)
21	ZK795.2	ZK795.2	n/a	chrIV 12,557,986	contains similarity to Homo sapiens hypothetical protein; ENSEMBL:ENSP00000352916
22	Y48B6A.5	Y48B6A.5	n/a	chrII 14,173,958	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
23	try-7	ZC581.6	n/a	chrI 6,642,054	C. elegans TRY-7 protein; contains similarity to Pfam domains PF00089 (Trypsin) , PF03761 (Domain of unknown function (DUF316)) contains similarity to Interpro domains IPR001314 (Peptidase S1A, chymotrypsin), IPR001254 (Peptidase S1 and S6, chymotrypsin/Hap), IPR005514 (Protein of unknown function DUF316), IPR009003 (Peptidase, trypsin-like serine and cysteine)
24	clec-261	ZC15.6	n/a	chrV 20,287,601	C. elegans CLEC-261 protein; contains similarity to Interpro domains IPR000817 (Prion protein), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
25	C36F7.5	C36F7.5	n/a	chrI 9,575,404	contains similarity to Pfam domain PF03057 Protein of unknown function contains similarity to Interpro domains IPR004296 (Protein of unknown function DUF236), IPR003979 (Tropoelastin), IPR013286 (Annexin, type VII)
26	M05B5.3	M05B5.3	n/a	chrI 7,187,440	contains similarity to Homo sapiens Similar to Suppressor protein SRP40; VG:OTTHUMP00000170311
27	F28H1.5	F28H1.5	n/a	chrI 3,979,010
28	clec-135	C16A11.8	n/a	chrII 4,257,930	C. elegans CLEC-135 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR001304 (C-type lectin)
29	F56F4.4	F56F4.4	n/a	chrI 6,138,476
30	T19D2.3	T19D2.3	n/a	chrX 3,939,726
31	try-6	F48A9.3	n/a	chrI 6,586,594	C. elegans TRY-6 protein; contains similarity to Pfam domains PF00089 (Trypsin) , PF03761 (Domain of unknown function (DUF316)) contains similarity to Interpro domains IPR001314 (Peptidase S1A, chymotrypsin), IPR001254 (Peptidase S1 and S6, chymotrypsin/Hap), IPR005514 (Protein of unknown function DUF316), IPR009003 (Peptidase, trypsin-like serine and cysteine)
32	tba-6	F32H2.9	n/a	chrI 8,996,289	C. elegans TBA-6 protein; contains similarity to Pfam domains PF00091 (Tubulin/FtsZ family, GTPase domain) , PF03953 (Tubulin/FtsZ family, C-terminal domain) contains similarity to Interpro domains IPR002454 (Gamma tubulin), IPR002452 (Alpha tubulin), IPR002453 (Beta tubulin), IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase), IPR004057 (Epsilon tubulin), IPR002967 (Delta tubulin), IPR000158 (Cell division protein FtsZ, N-terminal), IPR008280 (Tubulin/FtsZ, C-terminal)
33	F26F2.1	F26F2.1	n/a	chrV 20,555,875	contains similarity to Drosophila melanogaster Flybase gene name is CG2839-PA;; FLYBASE:CG2839
34	Y57G11B.3	Y57G11B.3	n/a	chrIV 14,572,262	contains similarity to Pfam domain PF00042 Globin contains similarity to Interpro domains IPR012292 (Globin), IPR009050 (Globin-like), IPR013314 (Globin, lamprey/hagfish type), IPR000971 (Globin, subset)
35	C04G2.2	C04G2.2	n/a	chrIV 10,091,506	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
36	Y23H5A.4	Y23H5A.4	n/a	chrI 2,618,955	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
37	wht-9	Y49E10.9	n/a	chrIII 12,393,102	C. elegans WHT-9 protein; contains similarity to Pfam domains PF01061 (ABC-2 type transporter) , PF00005 (ABC transporter) contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR003593 (AAA+ ATPase, core), IPR013525 (ABC-2 type transporter)
38	R13F6.5	R13F6.5	n/a	chrIII 6,848,166	contains similarity to Pfam domain PF01529 DHHC zinc finger domain contains similarity to Interpro domain IPR001594 (Zinc finger, DHHC-type)
39	ZC581.2	ZC581.2	n/a	chrI 6,656,611	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
40	C18G1.3	C18G1.3	n/a	chrV 4,762,839	contains similarity to Interpro domain IPR000694 (Proline-rich region)
41	F35C5.1	F35C5.1	n/a	chrII 12,881,287	contains similarity to Saccharomyces cerevisiae B-type regulatory subunit of protein phosphatase 2A (PP2A); SGD:YOR014W
42	scrm-6	F46A8.10	n/a	chrI 11,254,608	scrm-6 encodes a putative phospholipid scramblase homologous to human PLSCR1-5, and paralogous to other C. elegans SCRMs (e.g., SCRM-1); scrm-6(RNAi) animals have no obvious phenotype.
43	B0513.6	B0513.6	n/a	chrIV 13,855,821	contains similarity to Pfam domain PF04435 Domain of unknown function (DUF545) contains similarity to Interpro domain IPR006570 (SPK)
44	dlc-6	Y106G6G.3	n/a	chrI 10,323,861	dlc-6 encodes a putative dynein light chain 1; DLC-6 is orthologous to human DYNLL1 (OMIM:601562) and DYNLL2 (OMIM:608942), but much more divergent from them than its paralog DLC-1; DLC-6's other paralogs are DLC-2/-5; DLC-6 has no obvious function in mass RNAi assays.
45	Y41C4A.1	Y41C4A.1	n/a	chrIII 11,648,712	contains similarity to Oryza sativa Putative aspartate kinase.; TR:Q851Z6
46	F20B6.1	F20B6.1	n/a	chrX 4,200,926	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
47	H32C10.1	H32C10.1	n/a	chrIV 5,935,928	contains similarity to Interpro domains IPR006353 (HAD-superfamily hydrolase, subfamily IIA, CECR5), IPR006357 (HAD-superfamily hydrolase, subfamily IIA)
48	T02H6.4	T02H6.4	n/a	chrII 690,572	contains similarity to Pfam domain PF03762 Vitelline membrane outer layer protein I (VOMI) contains similarity to Interpro domain IPR005515 (Vitelline membrane outer layer protein I (VOMI))
49	ZK930.5	ZK930.5	n/a	chrII 11,882,963	contains similarity to Methanobacterium thermoautotrophicum Phosphoserine phosphatase.; TR:O27663
50	skr-9	C52D10.7	n/a	chrIV 17,163,837	skr-9 encodes a homolog of Skp1 in S. cerevisiae, a component of the SCF (Skp1, Cullin, F-box) ubiquitin-ligase complex that regulates ubiquitin-mediated protein degradation; SKR-9 is required for posterior body morphogenesis, embryonic and larval development, and postembryonic cell proliferation.