UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	nas-17	K03B8.2	0	chrV 11,399,699	nas-17 encodes an astacin-like metalloprotease.
2	K04H8.3	K04H8.3	n/a	chrI 14,256,314	contains similarity to Bacteroides thetaiotaomicron Putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismatesmutase.; TR:Q8A0T7
3	T21D12.7	T21D12.7	n/a	chrIV 290,077	contains similarity to Pfam domain PF00014 Kunitz/Bovine pancreatic trypsin inhibitor domain contains similarity to Interpro domains IPR002223 (Proteinase inhibitor I2, Kunitz metazoa), IPR013090 (Phospholipase A2, active site), IPR006150 (Cysteine-rich repeat)
4	nas-28	F42A10.8	3e-45	chrIII 6,182,093	C. elegans NAS-28 protein; contains similarity to Pfam domain PF01400 Astacin (Peptidase family M12A) contains similarity to Interpro domains IPR017050 (Peptidase M12A, astacin, nematode), IPR006025 (Peptidase M, neutral zinc metallopeptidases, zinc-binding site), IPR001506 (Peptidase M12A, astacin), IPR006026 (Peptidase, metallopeptidases), IPR000859 (CUB), IPR013032 (EGF-like region, conserved site)
5	T10D4.7	T10D4.7	n/a	chrII 3,118,051	contains similarity to Pfam domain PF02343 Domain of unknown function DUF130 contains similarity to Interpro domain IPR003326 (Protein of unknown function DUF130)
6	ZC328.5	ZC328.5	n/a	chrI 6,406,411
7	clec-108	Y26D4A.6	n/a	chrI 13,081,794	C. elegans CLEC-108 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
8	K12H6.4	K12H6.4	n/a	chrII 2,823,987
9	sri-37	D2062.2	n/a	chrII 2,630,401	C. elegans SRI-37 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
10	K12H6.9	K12H6.9	n/a	chrII 2,824,679
11	F20A1.2	F20A1.2	n/a	chrV 7,047,678	contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
12	F47C12.8	F47C12.8	n/a	chrIV 3,997,448	contains similarity to Pfam domain PF05912 Caenorhabditis elegans protein of unknown function (DUF870) contains similarity to Interpro domain IPR008588 (Protein of unknown function DUF870, Caenorhabditis species)
13	W02B3.7	W02B3.7	n/a	chrIII 691,490	contains similarity to Interpro domain IPR009644 (Fukutin-related)
14	F48G7.9	F48G7.9	n/a	chrV 628,338	contains similarity to Pfam domain PF00130 Phorbol esters/diacylglycerol binding domain (C1 domain) contains similarity to Interpro domains IPR015727 (Protein kinase C mu-related), IPR002219 (Protein kinase C, phorbol ester/diacylglycerol binding)
15	B0228.8	B0228.8	n/a	chrII 7,760,555
16	C16C8.7	C16C8.7	n/a	chrII 3,459,961
17	R107.2	R107.2	n/a	chrIII 9,044,850	contains similarity to Pfam domain PF01256 Carbohydrate kinase contains similarity to Interpro domain IPR000631 (Carbohydrate kinase)
18	Y43F8C.17	Y43F8C.17	n/a	chrV 19,712,303	contains similarity to Rhodosporidium toruloides Rhodotorucine A precursor 2.; SW:RHT2_RHOTO
19	F44D12.8	F44D12.8	n/a	chrIV 10,024,253	contains similarity to Homo sapiens Isoform 1 of MAP7 domain-containing protein 1; ENSEMBL:ENSP00000362244
20	grd-5	F41E6.2	n/a	chrV 8,619,427	grd-5 encodes a hedgehog-like protein, with an N-terminal signal sequence and a C-terminal Ground domain; GRD-5 is expressed in adult anterior and posterior seam cells, overlapping GRD-3 expression; the Ground domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins; GRD-5 is weakly required for normal molting; GRD-5 is also required for normal adult alae formation, growth to full size, and locomotion; all of these requirements may reflect common defects in cholesterol-dependent hedgehog-like signalling or in vesicle trafficking.
21	F56C3.8	F56C3.8	n/a	chrX 1,384,495
22	tag-272	C34B2.1	n/a	chrI 10,689,540	C. elegans TAG-272 protein ;
23	F49F1.3	F49F1.3	n/a	chrIV 4,115,363	contains similarity to Interpro domain IPR000694 (Proline-rich region)
24	ZK1248.1	ZK1248.1	n/a	chrII 5,843,377	ZK1248.1 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; ZK1248.1 has no clear orthologs in other organisms.
25	F07G11.7	F07G11.7	n/a	chrV 7,303,485	contains similarity to Pfam domain PF01482 Domain of unknown function DUF13 contains similarity to Interpro domain IPR002485 (Protein of unknown function DUF13)
26	cwp-2	C37H5.11	n/a	chrV 4,842,261	cwp-2 encodes a nematode-specific protein that is coexpressed with lov-1 and pkd-2.
27	F32B6.10	F32B6.10	n/a	chrIV 9,888,531	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
28	T05A6.4	T05A6.4	n/a	chrII 7,821,360	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
29	T22B7.4	T22B7.4	n/a	chrX 5,639,932	contains similarity to Pfam domain PF07039 Protein of unknown function (DUF1325) contains similarity to Interpro domain IPR010750 (Protein of unknown function DUF1325)
30	srj-8	T28A11.9	n/a	chrV 3,248,476	C. elegans SRJ-8 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
31	C39D10.2	C39D10.2	n/a	chrX 7,889,123
32	F19H6.5	F19H6.5	n/a	chrX 12,364,231	contains similarity to Homo sapiens Splice isoform 1 of O75143 Hypothetical protein KIAA0652; ENSEMBL:ENSP00000310321
33	nas-24	F20G2.4	1e-62	chrV 13,770,454	nas-24 encodes an astacin-like metalloprotease.
34	C35B1.3	C35B1.3	n/a	chrIV 4,081,235
35	try-5	K07B1.1	n/a	chrV 9,347,867	C. elegans TRY-5 protein; contains similarity to Pfam domain PF00089 Trypsin contains similarity to Interpro domains IPR001314 (Peptidase S1A, chymotrypsin), IPR001254 (Peptidase S1 and S6, chymotrypsin/Hap), IPR009003 (Peptidase, trypsin-like serine and cysteine)
36	nas-19	K03B8.5	1e-67	chrV 11,402,129	nas-19 encodes an astacin-like metalloprotease; large-scale expression studies reveal that a nas-19::GFP promoter fusion is expressed in the pharynx, intestine, vulva, and reproductive system.
37	T26A8.3	T26A8.3	n/a	chrIV 8,425,562
38	E02H9.9	E02H9.9	n/a	chrIII 2,467,742
39	K06A4.2	K06A4.2	n/a	chrV 9,487,363	contains similarity to Pfam domains PF00293 (NUDIX domain) , PF05026 (Dcp2, box A domain) contains similarity to Interpro domains IPR015797 (NUDIX), IPR007722 (Dcp2, box A), IPR000086 (NUDIX hydrolase, core)
40	ZK380.2	ZK380.2	n/a	chrX 1,633,167	contains similarity to Interpro domain IPR011072 (HR1 rho-binding repeat)
41	C49C8.6	C49C8.6	n/a	chrIV 8,657,801	contains similarity to Interpro domain IPR010916 (TonB box, conserved site)
42	D1037.5	D1037.5	n/a	chrI 3,692,099	contains similarity to Pfam domains PF01734 (Patatin-like phospholipase) , PF00023 (Ankyrin repeat) (2)contains similarity to Interpro domains IPR016035 (Acyl transferase/acyl hydrolase/lysophospholipase), IPR002641 (Patatin), IPR002110 (Ankyrin)
43	F35C5.4	F35C5.4	n/a	chrII 12,891,236	contains similarity to Homo sapiens Mucin-2 precursor; ENSEMBL:ENSP00000351956
44	F49F1.11	F49F1.11	n/a	chrIV 4,140,539	contains similarity to Pfam domain PF00337 Galactoside-binding lectin contains similarity to Interpro domains IPR001079 (Galectin, galactose-binding lectin), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup), IPR008985 (Concanavalin A-like lectin/glucanase)
45	nhr-225	T27B7.2	n/a	chrV 2,289,169	C. elegans NHR-225 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
46	F25C8.1	F25C8.1	n/a	chrV 20,903,971	contains similarity to Pfam domains PF01756 (Acyl-CoA oxidase) , PF02770 (Acyl-CoA dehydrogenase, middle domain) contains similarity to Interpro domains IPR013786 (Acyl-CoA dehydrogenase/oxidase, N-terminal), IPR006091 (Acyl-CoA dehydrogenase/oxidase, central region), IPR013764 (Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal), IPR012258 (Acyl-CoA oxidase), IPR009100 (Acyl-CoA dehydrogenase/oxidase, middle and N-terminal), IPR002655 (Acyl-CoA oxidase, C-terminal), IPR009075 (Acyl-CoA dehydrogenase/oxidase C-terminal)
47	ubc-24	F49E12.4	n/a	chrII 8,406,159	ubc-24 encodes a predicted conjugating enzyme (UBCs/E2s) of the ubiquitin-conjugation system.
48	Y66A7A.4	Y66A7A.4	n/a	chrIII 11,614,038
49	clec-232	F36G9.11	n/a	chrV 15,976,833	C. elegans CLEC-232 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
50	clec-130	W10G11.14	n/a	chrII 3,574,098	C. elegans CLEC-130 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)