UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	F58E1.7	F58E1.7	4e-174	chrII 1,678,353	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
2	srb-12	F58A6.10	n/a	chrII 5,153,860	C. elegans SRB-12 protein; contains similarity to Pfam domains PF02117 (C.elegans Sra family integral membrane protein) , PF02175 (C.elegans integral membrane protein Srb) contains similarity to Interpro domains IPR002184 (Serpentine beta receptor), IPR000344 (Nematode chemoreceptor, Sra)
3	C48C5.3	C48C5.3	n/a	chrX 8,959,409	contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
4	F01F1.13	F01F1.13	n/a	chrIII 5,877,744	contains similarity to Pfam domain PF00090 Thrombospondin type 1 domain contains similarity to Interpro domains IPR008085 (Thrombospondin, subtype 1), IPR000884 (Thrombospondin, type I)
5	gpa-11	C16A11.1	n/a	chrII 4,254,160	gpa-11 encodes a member of the G protein alpha subunit family of heterotrimeric GTPases; it is expressed in ADL and ASH amphid neurons.
6	R09D1.3	R09D1.3	n/a	chrII 9,439,305	contains similarity to Pfam domain PF00704 Glycosyl hydrolases family 18 contains similarity to Interpro domains IPR011583 (Chitinase II), IPR017853 (Glycoside hydrolase, catalytic core), IPR001223 (Glycoside hydrolase, family 18, catalytic domain), IPR013781 (Glycoside hydrolase, subgroup, catalytic core)
7	srg-44	F31E9.2	n/a	chrV 17,329,671	C. elegans SRG-44 protein; contains similarity to Pfam domain PF02118 C.elegans Srg family integral membrane protein contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
8	C02H6.1	C02H6.1	n/a	chrV 7,389,111	contains similarity to Pfam domain PF01762 Galactosyltransferase contains similarity to Interpro domain IPR002659 (Glycosyl transferase, family 31)
9	F20G4.2	F20G4.2	n/a	chrI 7,914,259	contains similarity to Saccharomyces cerevisiae Helicase encoded by the Y' element of subtelomeric regions, highly expressed in the mutants lacking the telomerase component TLC1; potentially phosphorylated by Cdc28p; SGD:YER190W
10	T01C8.3	T01C8.3	n/a	chrX 16,781,536
11	Y49E10.21	Y49E10.21	n/a	chrIII 12,458,332	contains similarity to Nanoarchaeum equitans DNA double-strand break repair rad50 ATPase.; SW:P62135
12	clec-115	C49A1.6	n/a	chrI 14,246,758	C. elegans CLEC-115 protein; contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domains IPR006583 (CW), IPR016187 (C-type lectin fold), IPR001304 (C-type lectin)
13	sra-11	F44F4.13	n/a	chrII 10,909,485	sra-11 encodes an orphan, G protein-coupled seven-transmembrane receptor; SRA-11 is expressed in three classes of interneurons, AIA, AIY, and AVB throughout larval and adult stages, and analysis of sra-11 mutations indicates that sra-11 activity in AIY is essential for olfactory imprinting; sra-11 expression in AIY is positively regulated by the TTX-3 and CEH-23 homeodomain proteins, with TTX-3 required for both initiation and maintenance of expression and CEH-23 required solely for maintenance.
14	str-61	F14F8.1	n/a	chrV 16,670,286	C. elegans STR-61 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
15	C56A3.4	C56A3.4	n/a	chrV 13,551,128	contains similarity to Interpro domain IPR001841 (Zinc finger, RING-type)
16	F28A10.5	F28A10.5	n/a	chrII 850,172	contains similarity to Pfam domain PF05050 Protein of unknown function (DUF672) contains similarity to Interpro domain IPR007744 (Protein of unknown function DUF672)
17	fbxa-145	F48C1.2	n/a	chrI 5,320,402	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
18	F37B12.3	F37B12.3	n/a	chrII 9,040,539	contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
19	Y37A1B.8	Y37A1B.8	9.000000000000001e-33	chrIV 14,022,381	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
20	srh-36	T03D3.4	n/a	chrV 2,820,623	C. elegans SRH-36 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
21	srg-62	C24B9.12	n/a	chrV 2,741,420	C. elegans SRG-62 protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
22	C05E4.7	C05E4.7	n/a	chrV 742,319
23	T06C12.14	T06C12.14	n/a	chrV 15,900,422	contains similarity to Pfam domain PF01549 ShK domain-like contains similarity to Interpro domain IPR003582 (Metridin-like ShK toxin)
24	srw-96	K04F1.2	n/a	chrV 1,674,580	C. elegans SRW-96 protein; contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR006069 (ATPase, P-type cation exchange, alpha subunit)
25	ZK402.1	ZK402.1	n/a	chrX 1,405,182
26	ZC373.4	ZC373.4	n/a	chrX 10,066,060	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
27	F36H12.2	F36H12.2	n/a	chrIV 5,275,375
28	W02H3.1	W02H3.1	n/a	chrX 11,104,112	contains similarity to Bacillus halodurans Myo-inositol 2-dehydrogenase.; TR:Q9KAH1
29	clec-121	Y25C1A.4	n/a	chrII 3,103,522	C. elegans CLEC-121 protein; contains similarity to Interpro domains IPR000104 (Antifreeze protein, type I), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
30	T11F9.13	T11F9.13	n/a	chrV 11,482,664	contains similarity to Thermotoga maritima ATP-dependent CLP protease, ATPase subunit.; TR:Q9WY41
31	T08D2.7	T08D2.7	n/a	chrX 186,625	contains similarity to Pfam domains PF00069 (Protein kinase domain) , PF00498 (FHA domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR008984 (SMAD/FHA domain), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000253 (Forkhead-associated)
32	T10B11.6	T10B11.6	n/a	chrI 6,944,267	contains similarity to Pfam domain PF05705 Eukaryotic protein of unknown function (DUF829) contains similarity to Interpro domain IPR008547 (Protein of unknown function DUF829, eukaryotic)
33	F22D3.5	F22D3.5	n/a	chrII 6,938,664
34	T21D9.2	T21D9.2	n/a	chrX 2,095,709	contains similarity to Interpro domain IPR008075 (Lipocalin-1 receptor)
35	F11D11.4	F11D11.4	n/a	chrV 18,762,417	contains similarity to Pfam domain PF03409 Protein of unknown function (DUF274) contains similarity to Interpro domain IPR005071 (Protein of unknown function DUF274)
36	F21C10.1	F21C10.1	n/a	chrV 9,132,804	contains similarity to Pfam domain PF01705 CX module contains similarity to Interpro domain IPR002619 (Protein of unknown function CX)
37	clec-213	C50E3.3	n/a	chrV 7,606,857	C. elegans CLEC-213 protein; contains similarity to Interpro domain IPR016187 (C-type lectin fold)
38	ZC412.8	ZC412.8	n/a	chrV 14,879,632	contains similarity to Plasmodium cynomolgi Circumsporozoite protein precursor (CS).; SW:P08675
39	M04B2.2	M04B2.2	n/a	chrIV 11,529,284	contains similarity to Pfam domains PF01170 (Putative RNA methylase family UPF0020) , PF02926 (THUMP domain) contains similarity to Interpro domains IPR004114 (THUMP), IPR001091 (Site-specific DNA-methyltransferase (cytosine-N4-specific)), IPR000241 (Putative RNA methylase)
40	tag-4	ZK337.4	n/a	chrI 14,984,784	tag-4 encodes a novel protein with low similarity to human putative splicing factor YT521
41	W06B3.1	W06B3.1	n/a	chrX 12,015,209	contains similarity to Pfam domain PF01467 Cytidylyltransferase contains similarity to Interpro domains IPR004821 (Cytidyltransferase-related), IPR005248 (Probable nicotinate-nucleotide adenylyltransferase), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold), IPR004820 (Cytidylyltransferase)
42	Y52B11A.8	Y52B11A.8	n/a	chrI 11,033,190	contains similarity to Interpro domains IPR016090 (Phospholipase A2), IPR013090 (Phospholipase A2, active site)
43	B0547.2	B0547.2	n/a	chrIV 5,646,017
44	K11H12.6	K11H12.6	n/a	chrIV 667,977
45	ZK218.1	ZK218.1	n/a	chrV 17,092,954	contains similarity to Pfam domain PF01549 ShK domain-like contains similarity to Interpro domain IPR003582 (Metridin-like ShK toxin)
46	F21H12.3	F21H12.3	n/a	chrII 6,082,723
47	F20E11.7	F20E11.7	n/a	chrV 17,465,622	contains similarity to Pfam domain PF03436 Domain of unknown function (DUF281) contains similarity to Interpro domains IPR005098 (Protein of unknown function DUF281), IPR006662 (Thioredoxin-related)
48	str-190	C18B10.7	n/a	chrV 7,477,853	C. elegans STR-190 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
49	R07E5.11	R07E5.11	n/a	chrIII 4,415,004	contains similarity to Salmonella typhimurium Putative surface-exposed virulence protein bigA precursor.; SW:BIGA_SALTY
50	srh-245	F31F4.9	n/a	chrV 655,327	C. elegans SRH-245 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)