UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	clec-161	F58A4.5	0	chrIII 9,605,759	C. elegans CLEC-161 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
2	srsx-37	M01B2.7	n/a	chrV 15,258,341	C. elegans SRSX-37 protein; contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
3	clec-94	ZK39.3	n/a	chrI 11,147,370	C. elegans CLEC-94 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
4	K12H6.8	K12H6.8	n/a	chrII 2,828,347
5	C49C8.6	C49C8.6	n/a	chrIV 8,657,801	contains similarity to Interpro domain IPR010916 (TonB box, conserved site)
6	nhr-59	T27B7.1	n/a	chrV 2,277,137	C. elegans NHR-59 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
7	Y43F8C.16	Y43F8C.16	n/a	chrV 19,710,255	contains similarity to Drosophila melanogaster Flybase gene name is CG31439-PA;; FLYBASE:CG31439
8	clec-232	F36G9.11	n/a	chrV 15,976,833	C. elegans CLEC-232 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
9	clec-95	ZK39.2	n/a	chrI 11,149,626	C. elegans CLEC-95 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
10	K12H6.5	K12H6.5	n/a	chrII 2,826,180
11	ZK380.2	ZK380.2	n/a	chrX 1,633,167	contains similarity to Interpro domain IPR011072 (HR1 rho-binding repeat)
12	nas-19	K03B8.5	n/a	chrV 11,402,129	nas-19 encodes an astacin-like metalloprotease; large-scale expression studies reveal that a nas-19::GFP promoter fusion is expressed in the pharynx, intestine, vulva, and reproductive system.
13	clec-207	F36F12.5	n/a	chrV 2,096,664	C. elegans CLEC-207 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
14	Y25C1A.2	Y25C1A.2	n/a	chrII 3,112,906	contains similarity to Pfam domain PF02343 Domain of unknown function DUF130 contains similarity to Interpro domain IPR003326 (Protein of unknown function DUF130)
15	F19H6.6	F19H6.6	n/a	chrX 12,362,704	contains similarity to Saccharomyces cerevisiae Cytoplasmic protein of unknown function, potential Cdc28p substrate; SGD:YAL031C
16	F49F1.11	F49F1.11	n/a	chrIV 4,140,539	contains similarity to Pfam domain PF00337 Galactoside-binding lectin contains similarity to Interpro domains IPR001079 (Galectin, galactose-binding lectin), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup), IPR008985 (Concanavalin A-like lectin/glucanase)
17	srbc-67	T24A6.10	n/a	chrV 3,539,627	C. elegans SRBC-67 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
18	F58A4.1	F58A4.1	n/a	chrIII 9,599,163	contains similarity to Drosophila melanogaster Flybase gene name is CG34220-PA;; FLYBASE:CG34220
19	try-5	K07B1.1	n/a	chrV 9,347,867	C. elegans TRY-5 protein; contains similarity to Pfam domain PF00089 Trypsin contains similarity to Interpro domains IPR001314 (Peptidase S1A, chymotrypsin), IPR001254 (Peptidase S1 and S6, chymotrypsin/Hap), IPR009003 (Peptidase, trypsin-like serine and cysteine)
20	clec-96	ZK39.5	n/a	chrI 11,151,582	C. elegans CLEC-96 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin), IPR001202 (WW/Rsp5/WWP)
21	Y26D4A.2	Y26D4A.2	n/a	chrI 13,067,990	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domains IPR006583 (CW), IPR016187 (C-type lectin fold)
22	clec-133	W10G11.12	n/a	chrII 3,578,720	C. elegans CLEC-133 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
23	scl-9	F49E11.4	n/a	chrIV 13,047,679	C. elegans SCL-9 protein; contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1 related)
24	T26E3.6	T26E3.6	n/a	chrI 12,661,501	contains similarity to Homo sapiens Low-density lipoprotein receptor-related protein 2 precursor; ENSEMBL:ENSP00000263816
25	T02D1.7	T02D1.7	n/a	chrIV 17,406,968	contains similarity to Rhizobium meliloti Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenasescomplex (EC 2.3.1.12) (E2).; SW:ODP2_RHIME
26	clec-208	F36F12.6	n/a	chrV 2,098,548	C. elegans CLEC-208 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
27	F41B4.3	F41B4.3	n/a	chrX 6,835,782
28	clc-4	T05A10.2	n/a	chrX 10,783,378	clc-4 encodes a claudin homolog that may be required for normal cohesion of apical junctions in epithelia; CLC-4 is worm-specific, with obvious homologs only in C. elegans; claudins are integral membrane proteins with four transmembrane sequences that are found in mammalian tight junctions (TJs), induce TJs when transgenically expressed in cells normally lacking them, and can mediate the specific conductance of of specific ions (e.g., magnesium or calcium) through TJs while blocking the flow of water.
29	C33G3.5	C33G3.5	n/a	chrX 14,077,417	contains similarity to Homo sapiens Isoform E of Proteoglycan-4 precursor; ENSEMBL:ENSP00000356454
30	srj-8	T28A11.9	n/a	chrV 3,248,476	C. elegans SRJ-8 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
31	scl-7	C39E9.5	n/a	chrIV 13,070,819	C. elegans SCL-7 protein; contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1 related)
32	R107.2	R107.2	n/a	chrIII 9,044,850	contains similarity to Pfam domain PF01256 Carbohydrate kinase contains similarity to Interpro domain IPR000631 (Carbohydrate kinase)
33	sri-37	D2062.2	n/a	chrII 2,630,401	C. elegans SRI-37 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
34	R53.8	R53.8	n/a	chrII 9,977,190	contains similarity to Homo sapiens Putative uncharacterized protein (Fragment); ENSEMBL:ENSP00000333119
35	C16C8.10	C16C8.10	n/a	chrII 3,464,412
36	clec-130	W10G11.14	n/a	chrII 3,574,098	C. elegans CLEC-130 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
37	F59B2.12	F59B2.12	n/a	chrIII 9,019,194	contains similarity to Homo sapiens Similar to Dentin sialophosphoprotein preproprotein; ENSEMBL:ENSP00000282478
38	fipr-16	C06E1.6	n/a	chrIII 8,590,815	C. elegans FIPR-16 protein ;
39	F38E1.10	F38E1.10	n/a	chrV 8,374,729
40	fipr-17	Y48A6B.4	n/a	chrIII 11,007,399	C. elegans FIPR-17 protein ;
41	F09C6.10	F09C6.10	n/a	chrV 16,915,745	contains similarity to Plasmodium falciparum Circumsporozoite protein (Fragment).; TR:Q9U0Q2
42	C25F9.8	C25F9.8	n/a	chrV 19,395,796	contains similarity to Nicotiana glutinosa Ribonuclease NW.; TR:Q7XZV5
43	C09G12.5	C09G12.5	n/a	chrIV 3,479,529
44	Y39F10A.3	Y39F10A.3	n/a	chrII 782,448	contains similarity to Pfam domain PF05050 Protein of unknown function (DUF672) contains similarity to Interpro domain IPR007744 (Protein of unknown function DUF672)
45	Y43F8C.17	Y43F8C.17	n/a	chrV 19,712,303	contains similarity to Rhodosporidium toruloides Rhodotorucine A precursor 2.; SW:RHT2_RHOTO
46	T09B4.7	T09B4.7	n/a	chrI 6,160,874	contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000104 (Antifreeze protein, type I), IPR000719 (Protein kinase, core)
47	F49F1.9	F49F1.9	n/a	chrIV 4,137,200	contains similarity to Pfam domain PF00337 Galactoside-binding lectin contains similarity to Interpro domains IPR001079 (Galectin, galactose-binding lectin), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup), IPR000694 (Proline-rich region), IPR008985 (Concanavalin A-like lectin/glucanase)
48	T26A8.3	T26A8.3	n/a	chrIV 8,425,562
49	clec-106	Y18D10A.12	n/a	chrI 12,866,497	C. elegans CLEC-106 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
50	F25C8.1	F25C8.1	n/a	chrV 20,903,971	contains similarity to Pfam domains PF01756 (Acyl-CoA oxidase) , PF02770 (Acyl-CoA dehydrogenase, middle domain) contains similarity to Interpro domains IPR013786 (Acyl-CoA dehydrogenase/oxidase, N-terminal), IPR006091 (Acyl-CoA dehydrogenase/oxidase, central region), IPR013764 (Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal), IPR012258 (Acyl-CoA oxidase), IPR009100 (Acyl-CoA dehydrogenase/oxidase, middle and N-terminal), IPR002655 (Acyl-CoA oxidase, C-terminal), IPR009075 (Acyl-CoA dehydrogenase/oxidase C-terminal)