UCSC C. elegans Gene Sorter

JavaScript is disabled in your web browser

You must have JavaScript enabled in your web browser to use the Genome Browser

UCSC C. elegans Gene Sorter

genome assembly search

sort by display output

#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	F57H12.5	F57H12.5	0	chrIV 7,968,487	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
2	T01B6.4	T01B6.4	n/a	chrX 2,337,975
3	Y66A7A.4	Y66A7A.4	n/a	chrIII 11,614,038
4	Y116A8C.37	Y116A8C.37	0.000000000001	chrIV 17,130,526	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domain IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)
5	spe-8	F53G12.6	n/a	chrI 119,489	C. elegans SPE-8 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR015425 (Actin-binding FH2), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR000694 (Proline-rich region), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
6	K05F1.1	K05F1.1	n/a	chrII 5,802,499	contains similarity to Pfam domain PF01666 DX module contains similarity to Interpro domain IPR002593 (Protein of unknown function DX)
7	T19D2.3	T19D2.3	n/a	chrX 3,939,726
8	T09A12.1	T09A12.1	n/a	chrIV 8,245,495	contains similarity to Xenopus laevis DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I).; SW:P41512
9	F20D6.1	F20D6.1	n/a	chrV 8,191,303	contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)
10	F36G9.15	F36G9.15	n/a	chrV 15,987,734	contains similarity to Pfam domain PF06678 Protein of unknown function (DUF1179) contains similarity to Interpro domain IPR009564 (Protein of unknown function DUF1179)
11	C55B7.10	C55B7.10	n/a	chrI 6,502,907	contains similarity to Interpro domains IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core)
12	F32B6.10	F32B6.10	n/a	chrIV 9,888,531	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
13	ZK849.5	ZK849.5	n/a	chrI 14,202,318	contains similarity to Pfam domain PF01062 Bestrophin contains similarity to Interpro domain IPR000615 (Bestrophin)
14	F56F4.4	F56F4.4	n/a	chrI 6,138,476
15	sulp-6	W01B11.2	n/a	chrI 3,290,255	sulp-6 encodes one of eight C. elegans members of the sulfate permease family of anion transporters; by homology, SULP-6 is predicted to function as an anion transporter that regulates cellular pH and volume via transmembrane movement of electrolytes and fluids; a sulp-6::GFP transcriptional fusion is expressed in the posterior intestine.
16	clec-124	C17F4.1	n/a	chrII 3,250,580	C. elegans CLEC-124 protein; contains similarity to Interpro domain IPR016187 (C-type lectin fold)
17	Y23H5A.4	Y23H5A.4	n/a	chrI 2,618,955	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
18	F41D3.7	F41D3.7	n/a	chrI 12,267,272	contains similarity to Autographa californica nuclear polyhedrosis virus ORF 5 (Fragment).; TR:O71053
19	F23C8.7	F23C8.7	n/a	chrI 2,423,740	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
20	F59A6.2	F59A6.2	n/a	chrII 5,015,006	contains similarity to Homo sapiens High mobility group protein 1-like 10; ENSEMBL:ENSP00000215935
21	nhr-225	T27B7.2	n/a	chrV 2,289,169	C. elegans NHR-225 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
22	M110.7	M110.7	n/a	chrII 8,235,210	contains similarity to Pfam domain PF01237 Oxysterol-binding protein contains similarity to Interpro domain IPR000648 (Oxysterol-binding protein)
23	M162.7	M162.7	n/a	chrV 19,789,204	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domain IPR003125 (Protein of unknown function WSN)
24	Y45F10B.2	Y45F10B.2	n/a	chrIV 13,595,366	contains similarity to Mycoplasma pulmonis Hypothetical protein MYPU_6700.; TR:Q98PP9
25	T05D4.5	T05D4.5	n/a	chrIII 13,582,099	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein), IPR000533 (Tropomyosin)
26	W07G4.2	W07G4.2	n/a	chrV 13,035,710	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domains IPR006583 (CW), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
27	F25H5.2	F25H5.2	n/a	chrI 9,180,480
28	C46H11.6	C46H11.6	n/a	chrI 5,022,021	contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)
29	ZC328.5	ZC328.5	n/a	chrI 6,406,411
30	Y69E1A.3	Y69E1A.3	n/a	chrIV 10,953,548	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
31	wht-9	Y49E10.9	n/a	chrIII 12,393,102	C. elegans WHT-9 protein; contains similarity to Pfam domains PF01061 (ABC-2 type transporter) , PF00005 (ABC transporter) contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR003593 (AAA+ ATPase, core), IPR013525 (ABC-2 type transporter)
32	Y6B3B.7	Y6B3B.7	n/a	chrI 13,748,017	contains similarity to Interpro domain IPR000345 (Cytochrome c heme-binding site)
33	C18G1.3	C18G1.3	n/a	chrV 4,762,839	contains similarity to Interpro domain IPR000694 (Proline-rich region)
34	C32D5.4	C32D5.4	n/a	chrII 6,322,171
35	Y116A8C.38	Y116A8C.38	n/a	chrIV 17,132,537	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
36	C18H7.7	C18H7.7	n/a	chrIV 596,081
37	K03H1.9	K03H1.9	n/a	chrIII 9,941,014	contains similarity to Homo sapiens DAN15 protein; TR:Q99491
38	clec-99	ZK39.8	n/a	chrI 11,157,780	C. elegans CLEC-99 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
39	tag-212	T14D7.3	n/a	chrII 8,859,305	C. elegans TAG-212 protein; contains similarity to Pfam domain PF00957 Synaptobrevin contains similarity to Interpro domain IPR001388 (Synaptobrevin)
40	cwp-2	C37H5.11	n/a	chrV 4,842,261	cwp-2 encodes a nematode-specific protein that is coexpressed with lov-1 and pkd-2.
41	T08H10.4	T08H10.4	n/a	chrV 4,480,975	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domain IPR002656 (Acyltransferase 3)
42	T28D9.9	T28D9.9	n/a	chrII 6,484,502
43	F36A4.1	F36A4.1	n/a	chrIV 4,272,674	contains similarity to Pfam domain PF05912 Caenorhabditis elegans protein of unknown function (DUF870) contains similarity to Interpro domain IPR008588 (Protein of unknown function DUF870, Caenorhabditis species)
44	R09E10.2	R09E10.2	n/a	chrIV 10,317,896	contains similarity to Pfam domain PF00102 (Protein-tyrosine phosphatase)
45	C24D10.1	C24D10.1	6e-21	chrIV 5,167,373	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
46	srh-166	Y38H6C.12	n/a	chrV 20,520,671	C. elegans SRH-166 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
47	Y51B9A.3	Y51B9A.3	n/a	chrII 9,406,276	contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)
48	clec-236	Y70C5C.5	n/a	chrV 16,720,176	C. elegans CLEC-236 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
49	Y45F10B.3	Y45F10B.3	n/a	chrIV 13,593,732	contains similarity to Saccharomyces cerevisiae N-terminal domain appears to be involved in cellular responsiveness to RAS.; SGD:YNL138W
50	klp-17	W02B12.7	n/a	chrII 11,466,706	klp-17 encodes a C-terminal kinesin motor protein orthologous to Drosophila NCD and Saccharomyces cerevisiae KAR3; by homology, KLP-17 is predicted to function as a minus-end directed motor; loss of klp-17 activity via RNAi results in embryonic lethality generally at the one- or two-cell stage with disorganized mitotic spindles and polyploid nuclei, suggesting that KLP-17 plays a role in chromosome segregation and germline development; in situ hybridization studies reveal that klp-17 mRNA is localized specifically to cell nuclei during early development, from the one-cell stage of embryogenesis until early larval stages; a klp-17::gfp transgene did not yield detectable GFP expression, but did result in a small percentage of morphologically abnormal males and intersexual animals that grew slowly and died upon reaching maturity, consistent with a role for klp-17 in chromosome dynamics.