UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	F55A4.7	F55A4.7	1e-74	chrX 1,037,733	contains similarity to Pfam domain PF00402 Calponin family repeat contains similarity to Interpro domain IPR000557 (Calponin repeat)
2	srz-103	F14F8.4	n/a	chrV 16,678,452	C. elegans SRZ-103 protein; contains similarity to Interpro domain IPR001046 (Natural resistance-associated macrophage protein)
3	F42A6.2	F42A6.2	n/a	chrIV 3,341,612
4	str-250	C06B3.10	n/a	chrV 13,919,315	C. elegans STR-250 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
5	C17H12.6	C17H12.6	n/a	chrIV 6,821,899	contains similarity to Pfam domain PF02408 CUB-like domain contains similarity to Interpro domain IPR003366 (CUB-like region)
6	ZK380.2	ZK380.2	n/a	chrX 1,633,167	contains similarity to Interpro domain IPR011072 (HR1 rho-binding repeat)
7	C43F9.5	C43F9.5	n/a	chrIV 10,590,044	contains similarity to Interpro domain IPR006150 (Cysteine-rich repeat)
8	C16D6.1	C16D6.1	n/a	chrX 12,525,704	contains similarity to Interpro domain IPR000694 (Proline-rich region)
9	srg-51	Y40H7A.8	n/a	chrIV 15,139,977	C. elegans SRG-51 protein ;
10	4R79.2	4R79.2	n/a	chrIV 17,481,819	contains similarity to Pfam domains PF00071 (Ras family) , PF08477 (Miro-like protein) contains similarity to Interpro domains IPR006688 (ADP-ribosylation factor), IPR002041 (Ran GTPase), IPR013753 (Ras), IPR006687 (GTP-binding protein SAR1), IPR003577 (Ras small GTPase, Ras type), IPR013684 (Miro-like), IPR003578 (Ras small GTPase, Rho type), IPR001806 (Ras GTPase), IPR005225 (Small GTP-binding protein), IPR003579 (Ras small GTPase, Rab type)
11	T05A7.7	T05A7.7	n/a	chrII 4,680,482	contains similarity to Interpro domain IPR000118 (Granulin)
12	F15G9.3	F15G9.3	n/a	chrX 9,710,815	contains similarity to Plasmodium falciparum Prolyl-t-RNA synthase, putative (EC 6.1.1.15).; TR:Q8I2Q5
13	srd-36	R04D3.6	n/a	chrX 13,294,014	C. elegans SRD-36 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
14	C06C6.7	C06C6.7	n/a	chrV 15,993,879	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domain IPR003125 (Protein of unknown function WSN)
15	M03D4.6	M03D4.6	n/a	chrIV 6,144,282	contains similarity to Pfam domain PF02171 Piwi domain contains similarity to Interpro domains IPR003165 (Stem cell self-renewal protein Piwi), IPR012337 (Polynucleotidyl transferase, Ribonuclease H fold)
16	T04G9.1	T04G9.1	n/a	chrX 792,247	contains similarity to Pfam domain PF02178 AT hook motif contains similarity to Interpro domains IPR000637 (HMG-I and HMG-Y, DNA-binding), IPR000694 (Proline-rich region)
17	T20B6.1	T20B6.1	n/a	chrIII 2,898,031	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
18	srbc-10	C18B10.2	n/a	chrV 7,492,430	C. elegans SRBC-10 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
19	F55C7.2	F55C7.2	n/a	chrI 4,005,729
20	Y17G7B.19	Y17G7B.19	n/a	chrII 12,110,327	contains similarity to Pfam domain PF01666 (DX module)
21	cwp-5	F48C11.2	n/a	chrX 13,184,746	C. elegans CWP-5 protein; contains similarity to Interpro domains IPR000694 (Proline-rich region), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
22	nhr-39	F44A2.4	n/a	chrV 9,303,947	C. elegans NHR-39 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
23	R03G5.6	R03G5.6	n/a	chrX 7,808,111
24	Y37H9A.2	Y37H9A.2	n/a	chrI 13,780,578	contains similarity to Candida albicans Hyphally regulated protein precursor.; SW:HYR1_CANAL
25	str-143	C09H5.4	n/a	chrV 8,068,920	C. elegans STR-143 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
26	R05G6.1	R05G6.1	n/a	chrIV 7,539,920
27	tbx-33	Y66A7A.8	n/a	chrIII 11,635,769	C. elegans TBX-33 protein; contains similarity to Pfam domain PF00907 T-box contains similarity to Interpro domains IPR008967 (p53-like transcription factor, DNA-binding), IPR001699 (Transcription factor, T-box)
28	R07C3.10	R07C3.10	n/a	chrII 910,744
29	T28A11.13	T28A11.13	n/a	chrV 3,249,973	contains similarity to Interpro domains IPR011594 (Thioredoxin-like), IPR012336 (Thioredoxin-like fold), IPR012335 (Thioredoxin fold), IPR006662 (Thioredoxin-related)
30	clec-55	F08H9.9	n/a	chrV 14,480,717	C. elegans CLEC-55 protein; contains similarity to Pfam domains PF00431 (CUB domain) (2), PF00059 (Lectin C-type domain) contains similarity to Interpro domains IPR000859 (CUB), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
31	F57C12.2	F57C12.2	n/a	chrX 548,426	contains similarity to Pfam domain PF04670 Gtr1/RagA G protein conserved region contains similarity to Interpro domains IPR009053 (Prefoldin), IPR006762 (Gtr1/RagA G protein)
32	M163.7	M163.7	n/a	chrX 14,466,135	contains similarity to Reclinomonas americana Ribosomal protein L31.; TR:O21296
33	php-3	Y75B8A.1	n/a	chrIII 12,075,804	C. elegans PHP-3 protein; contains similarity to Pfam domain PF00046 Homeobox domain contains similarity to Interpro domains IPR012287 (Homeodomain-related), IPR000047 (Helix-turn-helix motif, lambda-like repressor), IPR001356 (Homeobox), IPR009057 (Homeodomain-like)
34	srz-10	ZK1037.11	n/a	chrV 15,308,296	C. elegans SRZ-10 protein ;
35	tkr-1	C38C10.1	n/a	chrIII 9,386,535	tkr-1 encodes a G protein-coupled receptor that is the C. elegans tachykinin-like neuropeptide receptor homolog; by homology, TKR-1 is predicted to function in modulation of excitatory neurotransmission; as loss of tkr-1 activity via RNAi results in moderate reduction of fat content, TKR-1 may play a specific role in regulating lipid metabolism; a tkr-1 reporter gene fusion is reportedly expressed in the socket cells of the deirid and post-deirid sensilla from the L2 larval stage through adulthood.
36	sri-37	D2062.2	n/a	chrII 2,630,401	C. elegans SRI-37 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
37	F02E11.2	F02E11.2	n/a	chrII 3,267,119
38	C08G5.3	C08G5.3	n/a	chrII 744,119	contains similarity to Pfam domain PF03762 Vitelline membrane outer layer protein I (VOMI) contains similarity to Interpro domain IPR005515 (Vitelline membrane outer layer protein I (VOMI))
39	C18H7.6	C18H7.6	n/a	chrIV 590,772	contains similarity to Interpro domain IPR000817 (Prion protein)
40	K02D10.3	K02D10.3	n/a	chrIII 8,771,549
41	K04F1.6	K04F1.6	n/a	chrV 1,671,713	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
42	B0524.3	B0524.3	n/a	chrIII 1,888,918
43	ZK177.3	ZK177.3	n/a	chrII 5,516,470	contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2-type)
44	C29F5.5	C29F5.5	n/a	chrII 6,297,911
45	R13A1.1	R13A1.1	n/a	chrIV 7,220,097
46	Y39E4B.13	Y39E4B.13	n/a	chrIII 13,092,265	contains similarity to Caulobacter crescentus Localization factor podJL (Polar organelle development protein)s[Contains: Localization factor podJS].; SW:PODJ_CAUCR
47	C04E7.1	C04E7.1	n/a	chrX 359,435
48	C03C10.2	C03C10.2	n/a	chrIII 4,092,033	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
49	F07C3.2	F07C3.2	n/a	chrV 9,226,731
50	srbc-12	K09C6.4	n/a	chrV 850,574	C. elegans SRBC-12 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR002651 (Protein of unknown function DUF32), IPR003492 (Batten's disease protein Cln3)