UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	F54C1.8	F54C1.8	5.9999999999999994e-111	chrI 5,005,486
2	T02E1.6	T02E1.6	n/a	chrI 8,211,732	contains similarity to Akodon andinus NADH dehydrogenase subunit 4 (EC 1.6.5.3) (NADH-ubiquinonesoxidoreductase chain 4) (Fragment).; TR:O21539
3	ZK546.7	ZK546.7	n/a	chrII 4,931,532	contains similarity to Interpro domain IPR000694 (Proline-rich region)
4	C45G9.9	C45G9.9	n/a	chrIII 5,055,142	contains similarity to Interpro domains IPR000694 (Proline-rich region), IPR005819 (Histone H5)
5	C35E7.9	C35E7.9	n/a	chrI 10,807,562	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein), IPR005819 (Histone H5)
6	F17C8.3	F17C8.3	n/a	chrIII 4,733,966	contains similarity to Pfam domains PF01958 (Domain of unknown function DUF108) , PF03447 (Homoserine dehydrogenase, NAD binding domain) contains similarity to Interpro domains IPR005106 (Aspartate/homoserine dehydrogenase, NAD-binding), IPR016040 (NAD(P)-binding), IPR002811 (Aspartate dehydrogenase)
7	C05B5.2	C05B5.2	n/a	chrIII 9,999,425	contains similarity to Agrobacterium tumefaciens Peptide synthetase.; TR:Q8UBE4
8	ZK507.3	ZK507.3	n/a	chrIII 9,102,142	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
9	Y43C5B.3	Y43C5B.3	n/a	chrIV 10,354,101	contains similarity to Pfam domain PF00153 Mitochondrial carrier protein contains similarity to Interpro domains IPR001312 (Hexokinase), IPR001993 (Mitochondrial substrate carrier)
10	F35H8.4	F35H8.4	n/a	chrII 9,559,658	contains similarity to Streptococcus pyogenes Hypothetical protein.; TR:Q8P0S2
11	C24A11.1	C24A11.1	n/a	chrI 5,402,352
12	ssq-3	ZC477.1	n/a	chrIV 7,112,230	C. elegans SSQ-3 protein; contains similarity to Interpro domains IPR002952 (Eggshell protein), IPR006206 (Mevalonate and galactokinase), IPR001553 (RecA bacterial DNA recombination), IPR013286 (Annexin, type VII)
13	spe-11	F48C1.7	n/a	chrI 5,331,412	spe-11 encodes a novel protein that is required for early embryonic development and for regulating the dynamic morphology of sperm pseudopods; although the precise biological role of SPE-11 is not yet known, SPE-11 is one of the few paternally provided proteins known to be essential for embryogenesis, and may constitute a sperm-associated factor required for oocyte activation; SPE-11 is first detected in the nuclei of primary spermatocytes and then remains tightly associated with sperm chromatin until fertilization at which point it appears to be degraded.
14	C34D4.3	C34D4.3	n/a	chrIV 7,153,905	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
15	R10E4.7	R10E4.7	n/a	chrIII 4,295,916	contains similarity to Interpro domain IPR015813 (Pyruvate/Phosphoenolpyruvate kinase, catalytic core)
16	exl-1	F26H11.5	n/a	chrII 14,412,734	exl-1 encodes a putative chloride intracellular channel (CLIC) paralogous to EXC-4; transgenic EXL-1 can partially rescue the exc-4(rh133) mutant phenotype when its expression is driven with an exc-4 promoter; EXL-1 is localized to lysosomes in intestinal cells and coelomocytes, endoplasmic reticulum in coelomocytes, Golgi apparatus in muscle and the neurons PVD and CAN, plasma membrane in muscle arms, and to dense bodies linking muscle cytoskeleton to hypodermis through muscle cell membranes; EXL-1 has an N-terminal PTM domain required for its membrane targeting, and a C-terminal domain resembling omega-type glutathione-S-transferases; EXL-1 has no known function in vivo, and exl-1(ok857) mutants have no obvious phenotype.
17	C16A11.7	C16A11.7	n/a	chrII 4,256,423
18	F26F4.2	F26F4.2	n/a	chrIII 4,911,567	F26F4.2 encodes a novel protein with high similarity to C. elegans F37A8.1 and C. briggsae CBG18186.
19	F26B1.1	F26B1.1	n/a	chrI 6,328,529	contains similarity to Homo sapiens hypothetical protein; ENSEMBL:ENSP00000352916
20	C14C11.1	C14C11.1	n/a	chrV 5,664,396
21	C54D10.4	C54D10.4	n/a	chrV 12,420,859	contains similarity to Interpro domain IPR008952 (Tetraspanin)
22	C05C12.5	C05C12.5	n/a	chrIV 11,260,772	contains similarity to Homo sapiens cDNA FLJ10106 fis, clone HEMBA1002569, highly similar to Homo sapiens protein associated with Myc mRNA (Fragment); ENSEMBL:ENSP00000353197
23	T02E1.7	T02E1.7	n/a	chrI 8,209,741	contains similarity to Pfam domain PF02077 SURF4 family contains similarity to Interpro domains IPR002995 (Surfeit locus 4), IPR011592 (Surfeit locus 4-related)
24	Y106G6G.4	Y106G6G.4	n/a	chrI 10,322,489	contains similarity to Equine herpesvirus 1 Glycoprotein X precursor.; SW:P28968
25	C37A2.3	C37A2.3	n/a	chrI 6,785,976	contains similarity to Pfam domains PF08028 (Acyl-CoA dehydrogenase, C-terminal domain) , PF02770 (Acyl-CoA dehydrogenase, middle domain) , PF00441 (Acyl-CoA dehydrogenase, C-terminal domain) , PF02771 (Acyl-CoA dehydrogenase, N-terminal domain) contains similarity to Interpro domains IPR013107 (Acyl-CoA dehydrogenase, type 2, C-terminal), IPR006090 (Acyl-CoA oxidase/dehydrogenase, type 1), IPR013786 (Acyl-CoA dehydrogenase/oxidase, N-terminal), IPR006091 (Acyl-CoA dehydrogenase/oxidase, central region), IPR006089 (Acyl-CoA dehydrogenase, conserved site), IPR013764 (Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal), IPR009100 (Acyl-CoA dehydrogenase/oxidase, middle and N-terminal), IPR009075 (Acyl-CoA dehydrogenase/oxidase C-terminal), IPR006092 (Acyl-CoA dehydrogenase, N-terminal)
26	Y106G6H.13	Y106G6H.13	n/a	chrI 10,471,577	contains similarity to Bacillus cereus Hypothetical membrane spanning protein.; TR:Q813N7
27	T22C1.8	T22C1.8	n/a	chrI 7,957,209	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
28	C07G1.6	C07G1.6	n/a	chrIV 8,209,489
29	F44G4.5	F44G4.5	n/a	chrII 8,999,996	contains similarity to Anabaena sp Endopeptidase Clp ATP-binding chain B.; TR:Q8YM56
30	C03B8.3	C03B8.3	n/a	chrIII 7,712,627
31	C03B8.1	C03B8.1	n/a	chrIII 7,716,961
32	F36H12.5	F36H12.5	n/a	chrIV 5,267,206	contains similarity to Interpro domain IPR005819 (Histone H5)
33	K07A1.4	K07A1.4	n/a	chrI 9,589,308	contains similarity to Mycobacterium tuberculosis TcrZ protein (Fragment).; TR:Q50810
34	C14C10.1	C14C10.1	n/a	chrV 12,589,001	contains similarity to Pfam domain PF00153 Mitochondrial carrier protein contains similarity to Interpro domains IPR001993 (Mitochondrial substrate carrier), IPR000802 (Arsenical pump membrane protein), IPR002113 (Adenine nucleotide translocator 1)
35	T10H9.3	T10H9.3	n/a	chrV 6,654,528	contains similarity to Interpro domains IPR010989 (t-SNARE), IPR000727 (Target SNARE coiled-coil region)
36	F41G4.4	F41G4.4	n/a	chrX 16,830,293
37	C38C3.8	C38C3.8	n/a	chrV 1,505,005	contains similarity to Ascaris suum MFP2b.; TR:Q7YXJ9
38	F42A9.3	F42A9.3	n/a	chrIV 8,617,701
39	clec-155	T04A8.3	n/a	chrIII 4,684,119	C. elegans CLEC-155 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
40	C38C6.5	C38C6.5	n/a	chrII 14,631,497	contains similarity to Interpro domain IPR001574 (Ribosome-inactivating protein)
41	W06D4.3	W06D4.3	n/a	chrI 9,059,663	contains similarity to Pfam domain PF03114 BAR domain contains similarity to Interpro domain IPR004148 (BAR)
42	B0218.7	B0218.7	n/a	chrIV 8,165,316
43	C10C5.4	C10C5.4	n/a	chrIV 9,379,502	contains similarity to Pfam domains PF01546 (Peptidase family M20/M25/M40) , PF07687 (Peptidase dimerisation domain) contains similarity to Interpro domains IPR010159 (N-acyl-L-amino-acid amidohydrolase), IPR011650 (Peptidase M20, dimerisation), IPR002933 (Peptidase M20), IPR001261 (ArgE/DapE/ACY1/CPG2/YscS, conserved site)
44	F59A7.9	F59A7.9	n/a	chrV 2,005,893	contains similarity to Pfam domain PF00291 Pyridoxal-phosphate dependent enzyme contains similarity to Interpro domains IPR005856 (Cysteine synthase K/M), IPR001216 (Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site), IPR005859 (Cysteine synthase A), IPR001926 (Pyridoxal phosphate-dependent enzyme, beta subunit), IPR016040 (NAD(P)-binding)
45	C50D2.3	C50D2.3	n/a	chrII 106,848	contains similarity to Pfam domain PF00595 PDZ domain (Also known as DHR or GLGF) contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)
46	C28C12.1	C28C12.1	n/a	chrIV 8,502,192	contains similarity to Interpro domain IPR002217 (Lipoprotein LPP20)
47	F13G11.2	F13G11.2	n/a	chrIV 14,633,712	contains similarity to Rattus norvegicus Chondroadherin precursor (Cartilage leucine-rich protein).; SW:CHAD_RAT
48	ZK262.4	ZK262.4	n/a	chrV 18,424,010	contains similarity to Arabidopsis thaliana Similarity to salt-inducible protein.; TR:Q9LVA2
49	wht-5	F19B6.4	n/a	chrIV 12,338,972	C. elegans WHT-5 protein; contains similarity to Pfam domains PF01061 (ABC-2 type transporter) , PF00005 (ABC transporter) contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR003593 (AAA+ ATPase, core), IPR013525 (ABC-2 type transporter)
50	C10G8.2	C10G8.2	n/a	chrV 5,314,980	contains similarity to Pfam domain PF00014 Kunitz/Bovine pancreatic trypsin inhibitor domain contains similarity to Interpro domain IPR002223 (Proteinase inhibitor I2, Kunitz metazoa)