UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	F40H6.2	F40H6.2	0	chrIII 6,042,332
2	Y1A5A.2	Y1A5A.2	n/a	chrIII 3,984,495	contains similarity to Corynebacterium efficiens Putative nitrate transport protein.; TR:Q8FPW8
3	nhr-223	T26E4.8	n/a	chrV 15,796,934	C. elegans NHR-223 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
4	F55A4.4	F55A4.4	n/a	chrX 1,025,409	contains similarity to Pfam domain PF00035 Double-stranded RNA binding motif contains similarity to Interpro domains IPR001159 (Double-stranded RNA binding), IPR014720 (Double-stranded RNA-binding-like)
5	C47F8.6	C47F8.6	n/a	chrI 12,320,092	contains similarity to Pfam domain PF01762 Galactosyltransferase contains similarity to Interpro domain IPR002659 (Glycosyl transferase, family 31)
6	math-50	ZK250.8	n/a	chrII 1,957,153	math-50 encodes a protein which has a meprin-associated Traf homology (MATH) domain and may be involved in apoptosis.
7	B0496.1	B0496.1	n/a	chrIV 7,446,888	contains similarity to Pfam domain PF00651 BTB/POZ domain contains similarity to Interpro domains IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ), IPR000210 (BTB/POZ-like)
8	srw-57	F36G9.1	n/a	chrV 15,954,286	C. elegans SRW-57 protein; contains similarity to Pfam domain PF06976 Protein of unknown function (DUF1300) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR010726 (Protein of unknown function DUF1300), IPR000276 (GPCR, rhodopsin-like)
9	srh-122	R08H2.5	n/a	chrV 15,377,228	C. elegans SRH-122 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
10	F31A3.5	F31A3.5	n/a	chrX 17,558,148	contains similarity to Interpro domain IPR000694 (Proline-rich region)
11	F40A3.7	F40A3.7	n/a	chrV 7,897,725	contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
12	F42G2.6	F42G2.6	n/a	chrII 2,428,176	contains similarity to Pfam domain PF00046 Homeobox domain contains similarity to Interpro domains IPR012287 (Homeodomain-related), IPR000533 (Tropomyosin), IPR001356 (Homeobox), IPR009057 (Homeodomain-like)
13	ceh-30	C33D12.7	n/a	chrX 3,064,554	ceh-30 encodes a homeodomain protein most similar to Drosophila and mammalian BarH1 (OMIM:605211) which function in neuronal cell fate determination; the precise biological role of CEH-30 in C. elegans development and/or behavior is not yet known.
14	T09F5.2	T09F5.2	n/a	chrV 15,151,275	contains similarity to Saccharomyces cerevisiae cell wall mannoprotein; SGD:YOR009W
15	srw-10	ZC482.6	n/a	chrIII 12,755,860	C. elegans SRW-10 protein ;
16	srh-7	K09D9.7	n/a	chrV 4,009,007	C. elegans SRH-7 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
17	T25F10.4	T25F10.4	n/a	chrV 6,761,420	contains similarity to Interpro domain IPR006202 (Neurotransmitter-gated ion-channel ligand-binding)
18	W05H5.2	W05H5.2	n/a	chrII 12,442,169	contains similarity to Xanthomonas campestris Hypothetical protein.; TR:Q9Z3D0
19	K10C9.4	K10C9.4	n/a	chrV 1,051,572	contains similarity to Interpro domain IPR003945 (NADH-plastoquinone oxidoreductase, chain 5)
20	F26A1.6	F26A1.6	n/a	chrIII 4,816,522	contains similarity to Lumbricus rubellus Amine oxidase-like protein (Fragment).; TR:Q94610
21	fbxb-114	C30E1.5	n/a	chrX 16,922,274	C. elegans FBXB-114 protein; contains similarity to Pfam domain PF07735 F-box associated contains similarity to Interpro domain IPR012885 (F-box associated type 2)
22	gpa-9	F56H9.4	n/a	chrV 12,648,055	gpa-9 encodes a member of the G protein alpha subunit family of heterotrimeric GTPases; it is expressed in ASJ, PHB, PVQ, pharyngeal muscle, and the spermatheca.
23	C15H9.4	C15H9.4	n/a	chrX 6,103,253	contains similarity to Danio rerio Novel protein similar to human cerebral protein 11 (HUCEP11).; TR:Q1MTK0
24	sru-40	R07B5.3	n/a	chrV 9,833,347	C. elegans SRU-40 protein; contains similarity to Pfam domain PF02688 Domain of unknown function DUF215 contains similarity to Interpro domain IPR003839 (Protein of unknown function DUF215)
25	Y75B8A.31	Y75B8A.31	n/a	chrIII 12,353,159	contains similarity to Homo sapiens Isoform 1 of UPF0528 protein C5orf21 precursor; ENSEMBL:ENSP00000265139
26	elpc-3	ZK863.3	n/a	chrV 12,180,438	C. elegans ELPC-3 protein; contains similarity to Pfam domains PF04055 (Radical SAM superfamily) , PF00583 (Acetyltransferase (GNAT) family) contains similarity to Interpro domains IPR007197 (Radical SAM), IPR006638 (Elongator protein 3/MiaB/NifB), IPR000182 (GCN5-related N-acetyltransferase), IPR016181 (Acyl-CoA N-acyltransferase), IPR005910 (Histone acetyltransferase ELP3)
27	srx-98	F19B10.8	n/a	chrII 3,670,182	C. elegans SRX-98 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
28	C35C5.2	C35C5.2	n/a	chrX 11,539,654	contains similarity to Pfam domains PF04389 (Peptidase family M28) , PF02225 (PA domain) , PF04253 (Transferrin receptor-like dimerisation domain) contains similarity to Interpro domains IPR007365 (Transferrin receptor-like, dimerisation), IPR007484 (Peptidase M28), IPR003137 (Protease-associated PA)
29	srb-8	F37C12.15	n/a	chrIII 7,172,652	C. elegans SRB-8 protein; contains similarity to Pfam domains PF02117 (C.elegans Sra family integral membrane protein) , PF02175 (C.elegans integral membrane protein Srb) contains similarity to Interpro domains IPR002184 (Serpentine beta receptor), IPR000344 (Nematode chemoreceptor, Sra)
30	Y56A3A.5	Y56A3A.5	n/a	chrIII 11,889,625	contains similarity to Pfam domain PF01425 Amidase contains similarity to Interpro domains IPR000120 (Amidase signature enzyme), IPR000504 (RNA recognition motif, RNP-1)
31	Y45G12C.11	Y45G12C.11	n/a	chrV 2,551,494	contains similarity to Pfam domain PF03385 Protein of unknown function, DUF288 contains similarity to Interpro domain IPR005049 (Protein of unknown function DUF288)
32	C08G5.6	C08G5.6	n/a	chrII 771,341
33	tag-52	C02F12.4	n/a	chrX 3,676,290	C. elegans TAG-52 protein; contains similarity to Pfam domain PF00621 RhoGEF domain contains similarity to Interpro domains IPR000219 (Dbl homology (DH) domain), IPR001849 (Pleckstrin-like), IPR011993 (Pleckstrin homology-type)
34	sri-45	K07E8.9	n/a	chrII 660,949	C. elegans SRI-45 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
35	clec-92	Y52B11A.5	n/a	chrI 11,016,484	C. elegans CLEC-92 protein; contains similarity to Interpro domains IPR000694 (Proline-rich region), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
36	srg-39	T19C4.2	n/a	chrV 11,151,861	C. elegans SRG-39 protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
37	nhr-159	C17E7.7	n/a	chrV 3,876,286	C. elegans NHR-159 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
38	F07G6.2	F07G6.2	n/a	chrX 1,728,163
39	K01A11.2	K01A11.2	n/a	chrIII 3,426,861	contains similarity to Xenopus laevis LOC495955 protein.; TR:Q5PQ79
40	lact-7	C40H5.4	n/a	chrX 11,762,779	lact-7 encodes a beta-lactamase domain-containing protein.
41	R10D12.6	R10D12.6	n/a	chrV 13,949,458	contains similarity to Pfam domain PF01679 Uncharacterized protein family UPF0057 contains similarity to Interpro domain IPR000612 (Protein of unknown function UPF0057)
42	F23B2.7	F23B2.7	n/a	chrIV 9,151,248	contains similarity to Homo sapiens similar to Cylicin I (Multiple-band polypeptide I); ENSEMBL:ENSP00000331556
43	Y45F10B.12	Y45F10B.12	n/a	chrIV 13,587,824	contains similarity to Pfam domain PF07735 F-box associated contains similarity to Interpro domain IPR012885 (F-box associated type 2)
44	C12D5.5	C12D5.5	n/a	chrV 7,668,594
45	F41E7.6	F41E7.6	n/a	chrX 10,308,733	contains similarity to Pfam domain PF00755 Choline/Carnitine o-acyltransferase contains similarity to Interpro domain IPR000542 (Acyltransferase ChoActase/COT/CPT)
46	cyld-1	F40F12.5	n/a	chrIII 9,904,526	F40F12.5 encodes an ortholog of human CYLD1 (OMIM:605018, mutated in cylindromatosis); CYLD1 binds several members of the NF-kappaB signalling pathway, and can deubiquitinate target proteins.
47	E03H4.7	E03H4.7	n/a	chrI 12,422,814	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domain IPR002656 (Acyltransferase 3)
48	Y54G9A.1	Y54G9A.1	n/a	chrII 13,700,041	contains similarity to Carabus linnei NADH dehydrogenase subunit 5 (Fragment).; TR:O79584
49	nhr-266	F56H1.2	n/a	chrI 5,738,931	C. elegans NHR-266 protein; contains similarity to Pfam domains PF02206 (Domain of unknown function) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR003125 (Protein of unknown function WSN)
50	flp-32	R03A10.2	n/a	chrX 15,434,497	C. elegans FLP-32 protein ;