UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	F40F11.4	F40F11.4	0	chrIV 11,590,249	contains similarity to Interpro domains IPR000152 (Aspartic acid and asparagine hydroxylation site), IPR006210 (EGF), IPR001881 (EGF-like calcium-binding), IPR013032 (EGF-like region, conserved site)
2	ZK380.2	ZK380.2	n/a	chrX 1,633,167	contains similarity to Interpro domain IPR011072 (HR1 rho-binding repeat)
3	F55E10.2	F55E10.2	n/a	chrX 8,340,780
4	srj-20	Y45G12C.15	n/a	chrV 2,572,367	C. elegans SRJ-20 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
5	R07C3.10	R07C3.10	n/a	chrII 910,744
6	C03H5.4	C03H5.4	n/a	chrII 375,541	contains similarity to Pfam domain PF00068 Phospholipase A2 contains similarity to Interpro domains IPR016090 (Phospholipase A2), IPR001211 (Phospholipase A2, eukaryotic), IPR013090 (Phospholipase A2, active site)
7	lgc-31	F21A3.7	n/a	chrV 15,516,308	C. elegans LGC-31 protein
8	F14H12.6	F14H12.6	n/a	chrX 4,357,251
9	T24C12.1	T24C12.1	n/a	chrX 2,200,143	contains similarity to Interpro domain IPR008952 (Tetraspanin)
10	ZK1053.1	ZK1053.1	n/a	chrI 13,229,159	contains similarity to Pfam domain PF07801 Protein of unknown function (DUF1647) contains similarity to Interpro domain IPR012444 (Protein of unknown function DUF1647)
11	srz-103	F14F8.4	n/a	chrV 16,678,452	C. elegans SRZ-103 protein; contains similarity to Interpro domain IPR001046 (Natural resistance-associated macrophage protein)
12	php-3	Y75B8A.1	n/a	chrIII 12,075,804	C. elegans PHP-3 protein; contains similarity to Pfam domain PF00046 Homeobox domain contains similarity to Interpro domains IPR012287 (Homeodomain-related), IPR000047 (Helix-turn-helix motif, lambda-like repressor), IPR001356 (Homeobox), IPR009057 (Homeodomain-like)
13	M28.4	M28.4	n/a	chrII 10,645,246	contains similarity to Homo sapiens Kinesin-like protein 2; ENSEMBL:ENSP00000324020
14	nlp-22	T24D8.3	n/a	chrX 2,341,705	C. elegans NLP-22 protein ;
15	R13A1.1	R13A1.1	n/a	chrIV 7,220,097
16	srbc-12	K09C6.4	n/a	chrV 850,574	C. elegans SRBC-12 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR002651 (Protein of unknown function DUF32), IPR003492 (Batten's disease protein Cln3)
17	tbx-41	T26C11.1	n/a	chrX 1,865,937	C. elegans TBX-41 protein; contains similarity to Pfam domain PF00907 T-box contains similarity to Interpro domains IPR008967 (p53-like transcription factor, DNA-binding), IPR001699 (Transcription factor, T-box)
18	C10A4.3	C10A4.3	n/a	chrX 7,408,027
19	srd-49	R04B5.8	n/a	chrV 10,095,486	C. elegans SRD-49 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR003002 (7TM chemoreceptor, subfamily 1)
20	C46E10.5	C46E10.5	n/a	chrII 3,712,130
21	srx-21	F31F4.4	n/a	chrV 678,220	C. elegans SRX-21 protein; contains similarity to Pfam domain PF03383 Caenorhabditis serpentine receptor-like protein, class xa contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR005047 (Protein of unknown function DUF286, G protein-coupled receptor-like putative Caenorhabditis species)
22	Y39E4B.13	Y39E4B.13	n/a	chrIII 13,092,265	contains similarity to Caulobacter crescentus Localization factor podJL (Polar organelle development protein)s[Contains: Localization factor podJS].; SW:PODJ_CAUCR
23	str-250	C06B3.10	n/a	chrV 13,919,315	C. elegans STR-250 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
24	C16D9.3	C16D9.3	n/a	chrV 8,239,232
25	F55A4.7	F55A4.7	n/a	chrX 1,037,733	contains similarity to Pfam domain PF00402 Calponin family repeat contains similarity to Interpro domain IPR000557 (Calponin repeat)
26	F15G9.3	F15G9.3	n/a	chrX 9,710,815	contains similarity to Plasmodium falciparum Prolyl-t-RNA synthase, putative (EC 6.1.1.15).; TR:Q8I2Q5
27	F42A6.2	F42A6.2	n/a	chrIV 3,341,612
28	T28A11.13	T28A11.13	n/a	chrV 3,249,973	contains similarity to Interpro domains IPR011594 (Thioredoxin-like), IPR012336 (Thioredoxin-like fold), IPR012335 (Thioredoxin fold), IPR006662 (Thioredoxin-related)
29	M163.7	M163.7	n/a	chrX 14,466,135	contains similarity to Reclinomonas americana Ribosomal protein L31.; TR:O21296
30	tbx-11	F40H6.4	n/a	chrIII 6,046,285	tbx-11 encodes a T-box transcription factor that is orthologous to members of the Tbx2 subfamily of T-box transcription factors; by homology, TBX-11 is predicted to function in transcriptional regulation during cellular differentiation, potentially as both an activator and a repressor; however, as loss of tbx-11 function via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of tbx-11 in C. elegans development and/or behavior is not yet known.
31	ZK1240.8	ZK1240.8	n/a	chrII 2,328,024	contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger) contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR000315 (Zinc finger, B-box)
32	F40G9.5	F40G9.5	n/a	chrIII 184,128
33	str-31	C54F6.10	n/a	chrV 7,507,570	C. elegans STR-31 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR000539 (Frizzled protein)
34	F02D10.3	F02D10.3	n/a	chrX 13,461,339	contains similarity to Escherichia coli;Escherichia coli O6;Escherichia coli O157:H7 Hypothetical protein yeaG.; SW:YEAG_ECOLI
35	F28B4.1	F28B4.1	n/a	chrX 3,205,615
36	Y43F8B.10	Y43F8B.10	n/a	chrV 19,475,668
37	F37A4.6	F37A4.6	n/a	chrIII 6,706,446
38	K02D10.3	K02D10.3	n/a	chrIII 8,771,549
39	D2005.6	D2005.6	n/a	chrI 7,790,102	contains similarity to Homo sapiens Fusion protein SYT-SSX1; ENSEMBL:ENSP00000269138
40	F16B12.4	F16B12.4	n/a	chrX 14,097,334	contains similarity to Dictyostelium discoideum Myosin II heavy chain, non muscle.; SW:MYS2_DICDI
41	srd-36	R04D3.6	n/a	chrX 13,294,014	C. elegans SRD-36 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
42	F55C7.2	F55C7.2	n/a	chrI 4,005,729
43	F21H7.3	F21H7.3	n/a	chrV 16,232,966	contains similarity to Rickettsia conorii Hypothetical protein RC0540.; TR:Q92I80
44	fut-6	T05A7.5	n/a	chrII 4,654,556	C. elegans FUT-6 protein; contains similarity to Pfam domain PF00852 Glycosyltransferase family 10 (fucosyltransferase) contains similarity to Interpro domain IPR001503 (Glycosyl transferase, family 10)
45	M03D4.6	M03D4.6	n/a	chrIV 6,144,282	contains similarity to Pfam domain PF02171 Piwi domain contains similarity to Interpro domains IPR003165 (Stem cell self-renewal protein Piwi), IPR012337 (Polynucleotidyl transferase, Ribonuclease H fold)
46	C24A3.8	C24A3.8	n/a	chrX 9,006,620
47	T02H6.8	T02H6.8	n/a	chrII 681,180
48	F54C4.4	F54C4.4	n/a	chrIII 87,055
49	C17C3.6	C17C3.6	n/a	chrII 5,550,261	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
50	C03C10.2	C03C10.2	n/a	chrIII 4,092,033	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)