UCSC C. elegans Gene Sorter

JavaScript is disabled in your web browser

You must have JavaScript enabled in your web browser to use the Genome Browser

UCSC C. elegans Gene Sorter

genome assembly search

sort by display output

#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	srbc-26	F40D4.7	1e-155	chrV 17,172,551	C. elegans SRBC-26 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
2	T26E4.2	T26E4.2	n/a	chrV 15,781,680	contains similarity to Salmonella typhimurium Sialidase (EC 3.2.1.18) (Fragment).; TR:Q9R5J8
3	F21F8.2	F21F8.2	n/a	chrV 8,275,167	contains similarity to Pfam domain PF00026 Eukaryotic aspartyl protease contains similarity to Interpro domains IPR009007 (Peptidase aspartic, catalytic), IPR001461 (Peptidase A1)
4	C54G6.3	C54G6.3	n/a	chrI 996,578
5	ZK353.5	ZK353.5	n/a	chrIII 8,394,543
6	flp-27	C25H3.5	n/a	chrII 5,681,799	C. elegans FLP-27 protein ;
7	srg-64	ZK678.6	n/a	chrX 15,738,657	C. elegans SRG-64 protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
8	srv-19	H04M03.6	n/a	chrIV 5,873,058	C. elegans SRV-19 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
9	T22E7.2	T22E7.2	n/a	chrI 5,767,620	contains similarity to Pfam domain PF01529 DHHC zinc finger domain contains similarity to Interpro domains IPR001594 (Zinc finger, DHHC-type), IPR007087 (Zinc finger, C2H2-type)
10	str-83	B0213.7	n/a	chrV 3,978,022	C. elegans STR-83 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR000344 (Nematode chemoreceptor, Sra), IPR003002 (7TM chemoreceptor, subfamily 1)
11	srx-120	F49C5.2	n/a	chrII 12,532,032	C. elegans SRX-120 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
12	Y37A1B.8	Y37A1B.8	n/a	chrIV 14,022,381	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
13	srz-18	F46B3.11	n/a	chrV 20,622,846	C. elegans SRZ-18 protein; contains similarity to Interpro domain IPR001036 (Acriflavin resistance protein)
14	srd-55	K02A2.2	n/a	chrII 7,409,558	C. elegans SRD-55 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
15	T27C5.8	T27C5.8	n/a	chrV 17,417,742	contains similarity to Pfam domain PF06653 Protein of unknown function (DUF1164) contains similarity to Interpro domain IPR009545 (Protein of unknown function DUF1164)
16	D1014.4	D1014.4	n/a	chrV 8,134,170
17	sra-7	AH6.11	n/a	chrII 9,545,368	C. elegans SRA-7 protein; contains similarity to Pfam domain PF02117 C.elegans Sra family integral membrane protein contains similarity to Interpro domain IPR000344 (Nematode chemoreceptor, Sra)
18	srz-78	C09G12.3	n/a	chrIV 3,492,493	C. elegans SRZ-78 protein ;
19	srt-56	Y73C8C.9	n/a	chrV 3,121,061	C. elegans SRT-56 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
20	T11F9.13	T11F9.13	n/a	chrV 11,482,664	contains similarity to Thermotoga maritima ATP-dependent CLP protease, ATPase subunit.; TR:Q9WY41
21	srh-167	F57G8.3	n/a	chrV 16,334,360	C. elegans SRH-167 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
22	ZK856.11	ZK856.11	n/a	chrV 10,204,273	contains similarity to Pfam domain PF01176 Translation initiation factor 1A / IF-1 contains similarity to Interpro domains IPR016027 (Nucleic acid-binding, OB-fold-like), IPR012340 (Nucleic acid-binding, OB-fold), IPR006196 (S1, IF1 type), IPR001253 (Eukaryotic initiation factor 1A (eIF-1A))
23	srj-33	T07C12.1	n/a	chrV 9,936,513	C. elegans SRJ-33 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
24	F53F1.6	F53F1.6	n/a	chrV 13,416,842	contains similarity to Aeropyrum pernix Elongation factor 1-beta (EF-1-beta) (aEF-1beta).; SW:EF1B_AERPE
25	ZK1240.4	ZK1240.4	n/a	chrII 2,315,354
26	sri-37	D2062.2	n/a	chrII 2,630,401	C. elegans SRI-37 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
27	T27A10.5	T27A10.5	n/a	chrX 3,573,294
28	tag-4	ZK337.4	n/a	chrI 14,984,784	tag-4 encodes a novel protein with low similarity to human putative splicing factor YT521
29	ZK795.1	ZK795.1	n/a	chrIV 12,551,089	contains similarity to Pfam domain PF03770 Inositol polyphosphate kinase contains similarity to Interpro domain IPR005522 (Inositol polyphosphate kinase)
30	B0416.3	B0416.3	n/a	chrX 9,292,441
31	F41C6.4	F41C6.4	n/a	chrX 6,874,202
32	F58D12.1	F58D12.1	n/a	chrV 14,052,371	contains similarity to White spot syndrome virus Wsv359 (WSSV418).; TR:Q8VAP2
33	nhr-233	Y32B12B.6	n/a	chrV 16,570,335	C. elegans NHR-233 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
34	F45F2.7	F45F2.7	n/a	chrV 8,523,135	contains similarity to Pfam domain PF03189 Protein of unknown function, DUF270 contains similarity to Interpro domains IPR003945 (NADH-plastoquinone oxidoreductase, chain 5), IPR004878 (Protein of unknown function DUF270), IPR016196 (MFS general substrate transporter)
35	F28A10.5	F28A10.5	n/a	chrII 850,172	contains similarity to Pfam domain PF05050 Protein of unknown function (DUF672) contains similarity to Interpro domain IPR007744 (Protein of unknown function DUF672)
36	C17H1.5	C17H1.5	n/a	chrI 13,115,023	contains similarity to Mus musculus Inner centromere protein.; SW:Q9WU62
37	F48C5.1	F48C5.1	n/a	chrX 11,445,448	contains similarity to Pfam domain PF00047 Immunoglobulin domain contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR000742 (EGF-like, type 3), IPR007110 (Immunoglobulin-like), IPR013032 (EGF-like region, conserved site), IPR013151 (Immunoglobulin)
38	Y102A5D.1	Y102A5D.1	n/a	chrV 17,143,014
39	sri-46	K07E8.11	n/a	chrII 670,321	C. elegans SRI-46 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
40	F10A3.12	F10A3.12	n/a	chrV 16,164,918	contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
41	sre-13	C38C6.4	n/a	chrII 14,635,649	C. elegans SRE-13 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
42	srj-54	F37B4.11	n/a	chrV 2,859,248	C. elegans SRJ-54 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR006069 (ATPase, P-type cation exchange, alpha subunit)
43	srh-127	F37B4.1	n/a	chrV 2,894,429	C. elegans SRH-127 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
44	sri-9	Y102A5C.29	n/a	chrV 17,002,496	C. elegans SRI-9 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR000565 (DNA topoisomerase, type IIA, subunit B)
45	C55B6.4	C55B6.4	n/a	chrX 7,187,869
46	H01M10.2	H01M10.2	n/a	chrX 2,585,134	contains similarity to Interpro domain IPR006220 (Anthranilate synthase component II/delta crystallin)
47	F26F2.2	F26F2.2	n/a	chrV 20,559,052	contains similarity to Saccharomyces cerevisiae Global transcription activator that acts in complex with Snf2p, Snf5p, Snf6p, and Swi3p to assist gene-specific activators; involved in the regulation of expression of many genes, including ADH1, ADH2, GAL1, HO, INO1 and SUC2; SGD:YPL016W
48	F30A10.9	F30A10.9	n/a	chrI 9,505,158	contains similarity to Pfam domain PF04900 Fcf1 contains similarity to Interpro domains IPR006984 (Protein of unknown function DUF652), IPR006596 (Nucleotide binding protein, PINc)
49	D1022.5	D1022.5	n/a	chrII 7,458,058
50	T21D9.2	T21D9.2	n/a	chrX 2,095,709	contains similarity to Interpro domain IPR008075 (Lipocalin-1 receptor)