UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	F39E9.4	F39E9.4	0	chrII 3,284,898	F39E9.4 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; F39E9.4 has no clear orthologs in other organisms.
2	skr-9	C52D10.7	n/a	chrIV 17,163,837	skr-9 encodes a homolog of Skp1 in S. cerevisiae, a component of the SCF (Skp1, Cullin, F-box) ubiquitin-ligase complex that regulates ubiquitin-mediated protein degradation; SKR-9 is required for posterior body morphogenesis, embryonic and larval development, and postembryonic cell proliferation.
3	Y39E4A.1	Y39E4A.1	n/a	chrIII 12,951,765	contains similarity to Mus musculus Nuclear protein ZAP3.; SW:ZAP3_MOUSE
4	T05A8.1	T05A8.1	n/a	chrII 2,709,077
5	Y7A5A.8	Y7A5A.8	n/a	chrX 15,823,201	contains similarity to Plasmodium falciparum Hypothetical protein.; TR:Q8IL30
6	K07E12.2	K07E12.2	n/a	chrIII 6,737,547
7	F54H12.5	F54H12.5	n/a	chrIII 7,971,111	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
8	F47B7.4	F47B7.4	n/a	chrX 3,765,997	contains similarity to Pfam domain PF02343 Domain of unknown function DUF130 contains similarity to Interpro domain IPR003326 (Protein of unknown function DUF130)
9	rpl-42	C09H10.1	n/a	chrII 11,093,225	C. elegans RPL-42 protein ;
10	ZK1320.5	ZK1320.5	n/a	chrII 9,664,562	contains similarity to Interpro domain IPR008107 (Mycoplasma P48 major surface lipoprotein)
11	srh-83	F09G2.7	n/a	chrV 7,165,183	C. elegans SRH-83 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
12	T19C3.5	T19C3.5	n/a	chrIII 626,220	contains similarity to Pfam domains PF02886 (LBP / BPI / CETP family, C-terminal domain) , PF01273 (LBP / BPI / CETP family, N-terminal domain) contains similarity to Interpro domain IPR001124 (Lipid-binding serum glycoprotein)
13	C33E10.6	C33E10.6	n/a	chrX 17,268,242	contains similarity to Tetrahymena thermophila SB210 Putative uncharacterized protein.; TR:Q227I5
14	T27A3.5	T27A3.5	n/a	chrI 6,101,032	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
15	K06A1.2	K06A1.2	n/a	chrII 6,445,339
16	srh-78	DC2.2	n/a	chrV 218,314	C. elegans SRH-78 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
17	F07F6.2	F07F6.2	n/a	chrII 5,430,880	contains similarity to Homo sapiens 13 kDa protein; ENSEMBL:ENSP00000380244
18	K02A11.2	K02A11.2	n/a	chrI 9,745,095	contains similarity to Saccharomyces cerevisiae Nucleolar protein that binds nuclear localization sequences, required for pre-rRNA processing and ribosome biogenesis; SGD:YGR159C
19	W03F8.2	W03F8.2	n/a	chrIV 5,191,305	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif)
20	H08M01.1	H08M01.1	n/a	chrIV 13,835,341	contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR003071 (Orphan nuclear receptor, HMR type)
21	sra-22	F28C12.7	n/a	chrI 12,702,151	C. elegans SRA-22 protein; contains similarity to Pfam domain PF02117 C.elegans Sra family integral membrane protein contains similarity to Interpro domains IPR001463 (Sodium:alanine symporter), IPR000344 (Nematode chemoreceptor, Sra)
22	Y113G7B.14	Y113G7B.14	n/a	chrV 20,223,220	contains similarity to Pfam domains PF04851 (Type III restriction enzyme, res subunit) , PF00176 (SNF2 family N-terminal domain) contains similarity to Interpro domains IPR006935 (Restriction endonuclease, type I, R subunit/Type III, Res subunit), IPR000330 (SNF2-related), IPR014021 (Helicase, superfamily 1 and 2, ATP-binding), IPR014001 (DEAD-like helicase, N-terminal)
23	F07E5.4	F07E5.4	n/a	chrII 2,050,852
24	C03B1.6	C03B1.6	n/a	chrX 6,350,637
25	W03D8.8	W03D8.8	n/a	chrI 2,793,293	contains similarity to Pfam domains PF08840 (BAAT / Acyl-CoA thioester hydrolase C terminal) , PF04775 (Acyl-CoA thioester hydrolase / Bile acid-CoA amino acid N-acetyltransferase) contains similarity to Interpro domains IPR006862 (Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase), IPR014940 (BAAT/Acyl-CoA thioester hydrolase C-terminal), IPR016662 (Acyl-CoA thioesterase, long chain)
26	C48E7.8	C48E7.8	n/a	chrI 6,267,364	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domains IPR002656 (Acyltransferase 3), IPR006621 (Nose resistant to fluoxetine-4, N-terminal)
27	F41F3.1	F41F3.1	n/a	chrV 4,655,174
28	Y51A2D.18	Y51A2D.18	n/a	chrV 18,484,174	contains similarity to Pfam domains PF07690 (Major Facilitator Superfamily) , PF00083 (Sugar (and other) transporter) contains similarity to Interpro domains IPR007114 (Major facilitator superfamily), IPR001991 (Sodium:dicarboxylate symporter), IPR011701 (Major facilitator superfamily MFS-1), IPR005829 (Sugar transporter, conserved site), IPR005828 (General substrate transporter), IPR003663 (Sugar transporter), IPR016196 (MFS general substrate transporter)
29	C33C12.4	C33C12.4	n/a	chrII 2,165,992
30	T09E11.6	T09E11.6	n/a	chrI 12,367,467	contains similarity to Pfam domain PF02485 Core-2/I-Branching enzyme contains similarity to Interpro domain IPR003406 (Glycosyl transferase, family 14)
31	F47B7.7	F47B7.7	n/a	chrX 3,779,589	contains similarity to Ostertagia ostertagi Putative ES protein (Fragment).; TR:Q8WQ03
32	Y45F10A.3	Y45F10A.3	n/a	chrIV 13,511,278	contains similarity to Mus musculus Probable arylformamidase (EC 3.5.1.9) (Kynurenine formamidase) (KF).; SW:Q8K4H1
33	K11C4.2	K11C4.2	n/a	chrV 6,895,906	contains similarity to Pfam domain PF03006 Haemolysin-III related contains similarity to Interpro domain IPR004254 (Hly-III related proteins)
34	scrm-5	K08D10.8	n/a	chrIV 4,163,488	scrm-5 encodes a putative phospholipid scramblase homologous to human PLSCR1-5, and paralogous to other C. elegans SCRMs (e.g., SCRM-1); scrm-5(RNAi) animals have no obvious phenotype.
35	F55H12.2	F55H12.2	n/a	chrI 8,868,112	contains similarity to Interpro domain IPR000242 (Tyrosine specific protein phosphatase)
36	ZK1053.2	ZK1053.2	n/a	chrI 13,233,396	contains similarity to Saccharomyces cerevisiae anchorage subunit of a-agglutinin; SGD:YNR044W
37	F21C3.6	F21C3.6	n/a	chrI 7,284,859	contains similarity to Homo sapiens Isoform 1 of Caldesmon; ENSEMBL:ENSP00000354826
38	F26F4.8	F26F4.8	n/a	chrIII 4,904,678	contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2-type)
39	kcc-3	K02A2.3	n/a	chrII 7,428,601	C. elegans KCC-3 protein; contains similarity to Pfam domain PF00324 Amino acid permease contains similarity to Interpro domains IPR000076 (K-Cl co-transporter), IPR004841 (Amino acid permease-associated region)
40	F31B12.2	F31B12.2	n/a	chrX 10,822,704	contains similarity to Mus musculus Splicing factor, arginine/serine-rich 12 (Serine-arginine-richssplicing regulatory protein 86) (SRrp86).; SW:SFRC_MOUSE
41	W05B5.1	W05B5.1	n/a	chrI 13,043,893	contains similarity to Saccharomyces cerevisiae Homolog of human WASP, proline-rich protein; SGD:YOR181W
42	T15B7.6	T15B7.6	n/a	chrV 6,826,715
43	F14D2.9	F14D2.9	n/a	chrII 3,354,397	contains similarity to Xenopus laevis Putative uncharacterized protein.; TR:Q08AY0
44	snf-2	F55H12.1	n/a	chrI 8,873,592	C. elegans SNF-2 protein; contains similarity to Pfam domain PF00209 Sodium:neurotransmitter symporter family contains similarity to Interpro domain IPR000175 (Sodium:neurotransmitter symporter)
45	srg-46	F32H5.5	n/a	chrV 13,364,203	C. elegans SRG-46 protein ;
46	F44D12.3	F44D12.3	n/a	chrIV 10,022,456	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
47	C17C3.2	C17C3.2	n/a	chrII 5,566,360
48	T19D7.5	T19D7.5	n/a	chrX 665,501
49	F22D6.9	F22D6.9	n/a	chrI 7,100,795	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
50	sri-66	F28B1.6	n/a	chrV 17,060,972	C. elegans SRI-66 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)