UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	sfxn-1.2	F37H8.4	0	chrII 11,186,977	C. elegans SFXN-1.2 protein; contains similarity to Pfam domain PF03820 Tricarboxylate carrier contains similarity to Interpro domain IPR004686 (Tricarboxylate/iron carrier)
2	F44F4.10	F44F4.10	n/a	chrII 10,916,498	F44F4.1 encodes a nematode-specific sperm protein probably required for a normally high ovulation rate; F44F4.1 has no obvious non-nematode homologs, but does have a putative central coiled-coil domain, and is is paralogous to four other C. elegans proteins (B0207.11, F42G4.6, T08G11.2, and Y81G3A.1); F44F4.1(tm332) hermaphrodites show abnormal egg-laying, retaining significantly fewer eggs than wild-type (perhaps due to a lowered ovulation rate) while retaining late-stage embryos; F44F4.1 has no obvious phenotype in mass RNAi experiments, possibly because of genetic redundancy with its paralogs; F44F4.1 expression is enriched in spermatogenesis.
3	F36D3.4	F36D3.4	n/a	chrV 16,517,063	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein), IPR005819 (Histone H5)
4	T04A6.3	T04A6.3	n/a	chrIII 7,608,687	contains similarity to Interpro domain IPR006121 (Heavy metal transport/detoxification protein)
5	C06C6.9	C06C6.9	n/a	chrV 15,996,452	contains similarity to Pfam domain PF06678 Protein of unknown function (DUF1179) contains similarity to Interpro domain IPR009564 (Protein of unknown function DUF1179)
6	C16A11.7	C16A11.7	n/a	chrII 4,256,423
7	T05F1.5	T05F1.5	n/a	chrI 9,634,552	contains similarity to Cyanidium caldarium Phycobilisome linker polypeptide (Anchor polypeptide) (PBS-anchorsprotein).; SW:APCE_CYACA
8	clec-251	F11D11.8	n/a	chrV 18,746,563	C. elegans CLEC-251 protein; contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domains IPR006583 (CW), IPR016187 (C-type lectin fold)
9	C50F4.10	C50F4.10	n/a	chrV 9,530,766	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
10	F38A5.6	F38A5.6	n/a	chrIV 6,596,738	contains similarity to Pfam domain PF03114 BAR domain contains similarity to Interpro domain IPR004148 (BAR)
11	C27D8.1	C27D8.1	n/a	chrIV 12,718,599	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
12	C25D7.12	C25D7.12	n/a	chrV 15,032,736	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
13	C47A4.5	C47A4.5	n/a	chrIV 13,745,790	contains similarity to Saccharomyces cerevisiae N-terminal domain appears to be involved in cellular responsiveness to RAS.; SGD:YNL138W
14	F55D12.6	F55D12.6	n/a	chrI 7,902,571	contains similarity to Interpro domains IPR000104 (Antifreeze protein, type I), IPR001865 (Ribosomal protein S2), IPR001859 (Ribosomal protein P2), IPR001778 (Pollen allergen Poa pIX/Phl pVI, C-terminal)
15	C25G4.6	C25G4.6	n/a	chrIV 12,455,616	contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)
16	C38C3.8	C38C3.8	n/a	chrV 1,505,005	contains similarity to Ascaris suum MFP2b.; TR:Q7YXJ9
17	F36D1.4	F36D1.4	n/a	chrI 11,272,019	contains similarity to Homo sapiens Splice isoform C-alpha of O95644 Nuclear factor of activated T-cells, cytoplasmic 1; SW:O95644
18	C47A4.3	C47A4.3	n/a	chrIV 13,741,621	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
19	F20H11.4	F20H11.4	n/a	chrIII 6,609,417	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
20	F35E2.5	F35E2.5	n/a	chrI 11,742,773	contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316) contains similarity to Interpro domain IPR005514 (Protein of unknown function DUF316)
21	C10G11.8	C10G11.8	n/a	chrI 6,272,876	contains similarity to Pfam domain PF00004 ATPase family associated with various cellular activities (AAA) contains similarity to Interpro domains IPR003959 (AAA ATPase, core), IPR001270 (Chaperonin clpA/B), IPR003960 (AAA ATPase, conserved site), IPR005937 (26S proteasome subunit P45), IPR001957 (Bacterial chromosomal replication initiator protein, DnaA), IPR003593 (AAA+ ATPase, core)
22	C30A5.4	C30A5.4	n/a	chrIII 8,222,929	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
23	ZK265.3	ZK265.3	n/a	chrI 8,242,831	contains similarity to Ascaris suum MFP2.; TR:Q7YXK2
24	F58E6.5	F58E6.5	n/a	chrV 9,753,985	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
25	C09B9.4	C09B9.4	n/a	chrIV 5,032,484	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
26	F36A2.11	F36A2.11	n/a	chrI 8,822,940	contains similarity to Pyrococcus furiosus Hypothetical protein PF2017.; TR:Q8TZH6
27	clec-153	F10F2.8	n/a	chrIII 4,636,376	C. elegans CLEC-153 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
28	T16A9.5	T16A9.5	n/a	chrV 14,214,256	contains similarity to Pfam domain PF05884 Caenorhabditis elegans protein of unknown function (DUF856) contains similarity to Interpro domains IPR001991 (Sodium:dicarboxylate symporter), IPR008574 (Protein of unknown function DUF856, Caenorhabditis species)
29	ZC412.5	ZC412.5	n/a	chrV 14,874,791
30	K08C9.1	K08C9.1	n/a	chrI 11,485,648
31	F32H2.7	F32H2.7	n/a	chrI 8,996,424	contains similarity to Staphylococcus staphylolyticus Lysostaphin precursor (EC 3.4.24.75) (Glycyl-glycine endopeptidase).; SW:LSTP_STAST
32	F41G3.5	F41G3.5	n/a	chrII 6,748,034	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
33	ZK622.1	ZK622.1	n/a	chrII 5,294,747	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
34	C06A1.3	C06A1.3	n/a	chrII 10,573,080	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
35	C05C12.5	C05C12.5	n/a	chrIV 11,260,772	contains similarity to Homo sapiens cDNA FLJ10106 fis, clone HEMBA1002569, highly similar to Homo sapiens protein associated with Myc mRNA (Fragment); ENSEMBL:ENSP00000353197
36	Y106G6A.4	Y106G6A.4	n/a	chrI 9,931,412	contains similarity to Homo sapiens Splice isoform 3 of Q99963 SH3-containing GRB2-like protein 3; ENSEMBL:ENSP00000321799
37	C04F12.6	C04F12.6	n/a	chrI 9,693,209	contains similarity to Pfam domain PF03057 Protein of unknown function contains similarity to Interpro domains IPR004296 (Protein of unknown function DUF236), IPR013303 (Wnt-14 protein)
38	F36H12.5	F36H12.5	n/a	chrIV 5,267,206	contains similarity to Interpro domain IPR005819 (Histone H5)
39	srsx-37	M01B2.7	n/a	chrV 15,258,341	C. elegans SRSX-37 protein; contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
40	D1081.5	D1081.5	n/a	chrI 8,481,820	contains similarity to Interpro domain IPR009061 ()
41	C24A11.1	C24A11.1	n/a	chrI 5,402,352
42	R02F2.5	R02F2.5	n/a	chrIII 5,479,799	contains similarity to Interpro domains IPR003267 (Small proline-rich), IPR000694 (Proline-rich region)
43	C32E12.1	C32E12.1	n/a	chrI 5,234,144	contains similarity to Interpro domain IPR005819 (Histone H5)
44	F32B5.4	F32B5.4	n/a	chrI 2,692,274
45	gsp-4	T03F1.5	n/a	chrI 3,838,957	C. elegans GSP-4 protein; contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
46	srbc-67	T24A6.10	n/a	chrV 3,539,627	C. elegans SRBC-67 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
47	C03B8.1	C03B8.1	n/a	chrIII 7,716,961
48	C52E4.7	C52E4.7	n/a	chrV 11,995,047	C52E4.7 encodes a member of the histidine phosphatase superfamily orthologous to Bombyx mori ecdysteroid phosphate phosphatase (EPP), human STS1 (OMIM:609201) and human UBASH3A (OMIM:605736); C52E4.7 is also paralogous to C. elegans F09C12.8, F53B6.7, F55A11.11, and T07F12.1; while no explicit prediction has been made for C52E4.7's activity, it might be catalytically inactive; as loss of C52E4.7 activity results in no obvious defects, the precise role of C52E4.7 in C. elegans development and/or behavior is not yet known.
49	C43G2.3	C43G2.3	n/a	chrIV 6,578,783
50	F54C8.1	F54C8.1	n/a	chrIII 9,440,304	contains similarity to Pfam domains PF00725 (3-hydroxyacyl-CoA dehydrogenase, C-terminal domain) , PF02737 (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain) contains similarity to Interpro domains IPR008927 (6-phosphogluconate dehydrogenase, C-terminal-like), IPR006108 (3-hydroxyacyl-CoA dehydrogenase, C-terminal), IPR013328 (Dehydrogenase, multihelical), IPR006176 (3-hydroxyacyl-CoA dehydrogenase, NAD binding), IPR006180 (3-hydroxyacyl-CoA dehydrogenase, conserved site), IPR016040 (NAD(P)-binding), IPR006036 (Potassium uptake protein TrkA)