UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	F35C11.6	F35C11.6	3e-95	chrII 8,258,607	contains similarity to Homo sapiens Oxysterol binding protein-related protein 11; ENSEMBL:ENSP00000296220
2	R05C11.1	R05C11.1	n/a	chrIV 2,070,210	contains similarity to Interpro domain IPR014756 (Immunoglobulin E-set)
3	nhr-132	R11G11.1	n/a	chrV 535,310	C. elegans NHR-132 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
4	F59B10.6	F59B10.6	n/a	chrII 10,523,795	contains similarity to Prochlorococcus marinus Possible paralytic/GBP/PSP peptide precursor.; TR:Q7TUU1
5	srsx-32	F20A1.3	n/a	chrV 7,018,087	C. elegans SRSX-32 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
6	twk-14	K01D12.4	n/a	chrV 12,388,845	C. elegans TWK-14 protein; contains similarity to Pfam domain PF07885 Ion channel contains similarity to Interpro domains IPR003280 (Potassium channel, two pore-domain), IPR005410 (Potassium channel, two pore-domain, THIK), IPR013099 (Ion transport 2), IPR003092 (Potassium channel, two pore-domain, TASK)
7	R05A10.8	R05A10.8	n/a	chrIV 14,156,627	contains similarity to Pfam domain PF05050 Protein of unknown function (DUF672) contains similarity to Interpro domain IPR007744 (Protein of unknown function DUF672)
8	F40A3.1	F40A3.1	n/a	chrV 7,893,499
9	srab-12	C47A10.6	n/a	chrV 17,782,010	C. elegans SRAB-12 protein; contains similarity to Pfam domain PF02117 C.elegans Sra family integral membrane protein contains similarity to Interpro domain IPR000344 (Nematode chemoreceptor, Sra)
10	C05D11.5	C05D11.5	n/a	chrIII 6,410,742	contains similarity to Pfam domain PF01261 Xylose isomerase-like TIM barrel contains similarity to Interpro domains IPR013279 (Apoptosis regulator, Bcl-X), IPR012307 (Xylose isomerase-type TIM barrel), IPR013022 (Xylose isomerase-like, TIM barrel)
11	F15E6.9	F15E6.9	n/a	chrIV 4,296,304
12	Y81G3A.3	Y81G3A.3	n/a	chrII 13,087,735	contains similarity to Pfam domains PF05773 (RWD domain) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR006575 (RWD), IPR016135 (Ubiquitin-conjugating enzyme/RWD-like), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000276 (GPCR, rhodopsin-like)
13	T13C5.5	T13C5.5	n/a	chrX 6,203,287	n/a
14	T10G3.2	T10G3.2	n/a	chrV 13,478,579	contains similarity to Mus musculus Transmembrane protein TIARP.; TR:Q91W31
15	clec-2	B0454.7	n/a	chrII 3,021,991	C. elegans CLEC-2 protein; contains similarity to Pfam domains PF00431 (CUB domain) , PF00059 (Lectin C-type domain) (2)contains similarity to Interpro domains IPR000859 (CUB), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
16	Y51A2A.6	Y51A2A.6	n/a	chrV 18,303,075	contains similarity to Interpro domain IPR016187 (C-type lectin fold)
17	srx-32	R13D11.9	n/a	chrV 820,140	C. elegans SRX-32 protein ;
18	inx-20	T23H4.1	n/a	chrI 9,877,813	C. elegans INX-20 protein; contains similarity to Pfam domain PF00876 Innexin contains similarity to Interpro domain IPR000990 (Innexin)
19	B0546.5	B0546.5	n/a	chrIV 3,389,078	contains similarity to Pfam domain PF06681 Protein of unknown function (DUF1182) contains similarity to Interpro domain IPR010601 (Protein of unknown function DUF1182)
20	K11E4.1	K11E4.1	n/a	chrX 13,715,160	contains similarity to Pfam domain PF01764 (Lipase (class 3))
21	nhr-197	K06B4.7	n/a	chrV 15,688,881	C. elegans NHR-197 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
22	F54D12.8	F54D12.8	n/a	chrII 1,396,527	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domains IPR006583 (CW), IPR003609 (Apple-like)
23	nhr-113	ZK1025.9	n/a	chrI 11,474,430	nhr-113 encodes a nuclear receptor that is most highly conserved amongst nematode species.
24	C33C12.7	C33C12.7	n/a	chrII 2,174,952
25	C28H8.2	C28H8.2	n/a	chrIII 5,923,760
26	bath-26	T07H3.6	n/a	chrII 1,600,097	C. elegans BATH-26 protein; contains similarity to Pfam domains PF00651 (BTB/POZ domain) , PF00917 (MATH domain) contains similarity to Interpro domains IPR002083 (MATH), IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ)
27	srab-16	R13D11.6	n/a	chrV 783,761	C. elegans SRAB-16 protein; contains similarity to Pfam domain PF02117 C.elegans Sra family integral membrane protein contains similarity to Interpro domain IPR000344 (Nematode chemoreceptor, Sra)
28	F28G4.3	F28G4.3	n/a	chrV 16,286,908	contains similarity to Pfam domain PF07801 Protein of unknown function (DUF1647) contains similarity to Interpro domain IPR012444 (Protein of unknown function DUF1647)
29	T02E1.8	T02E1.8	n/a	chrI 8,236,518
30	F25H2.2	F25H2.2	n/a	chrI 10,544,713	contains similarity to Pfam domains PF00595 (PDZ domain (Also known as DHR or GLGF)) , PF00787 (PX domain) contains similarity to Interpro domains IPR002048 (Calcium-binding EF-hand), IPR001683 (Phox-like), IPR001478 (PDZ/DHR/GLGF)
31	C36C9.5	C36C9.5	n/a	chrX 1,701,859
32	ZC374.2	ZC374.2	n/a	chrX 10,041,531	contains similarity to Pfam domain PF00041 Fibronectin type III domain contains similarity to Interpro domains IPR008957 (Fibronectin, type III-like fold), IPR003961 (Fibronectin, type III)
33	pax-2	K06B9.5	n/a	chrIV 4,202,013	C. elegans PAX-2 protein; contains similarity to Pfam domain PF00292 'Paired box' domain contains similarity to Interpro domains IPR001523 (Paired box protein, N-terminal), IPR011991 (Winged helix repressor DNA-binding), IPR009057 (Homeodomain-like)
34	T10D4.3	T10D4.3	n/a	chrII 3,130,228	contains similarity to Pfam domain PF00704 Glycosyl hydrolases family 18 contains similarity to Interpro domains IPR011583 (Chitinase II), IPR017853 (Glycoside hydrolase, catalytic core), IPR001223 (Glycoside hydrolase, family 18, catalytic domain), IPR013781 (Glycoside hydrolase, subgroup, catalytic core)
35	ncx-5	Y32F6B.2	n/a	chrV 10,488,232	ncx-5 encodes a putative 4Na[+]/1Ca[2+],1K[+] exchanger, orthologous to human SLC24A1-5 and paralogous to NCX-4; NCX-5 is predicted to export free cytoplasmic Ca[2+] with low affinity but high capacity, being complemented by low-capacity/high-affinity Ca[2+] ATPase pumps such as MCA-1/-3; NCX-5 has tandem Calx-alpha domains predicted to carry out ion transport; NCX-5 has no obvious function in mass RNAi assays.
36	str-151	T03E6.1	n/a	chrV 16,577,135	C. elegans STR-151 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
37	Y41C4A.6	Y41C4A.6	n/a	chrIII 11,697,361	contains similarity to Methanococcus jannaschii Hypothetical protein MJ0951.; SW:Y951_METJA
38	W05B2.7	W05B2.7	n/a	chrIII 10,989,906	contains similarity to Interpro domain IPR000533 (Tropomyosin)
39	cyp-34A3	C41G6.1	n/a	chrV 15,229,059	C. elegans CYP-34A3 protein; contains similarity to Pfam domain PF00067 Cytochrome P450 contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR002403 (Cytochrome P450, E-class, group IV)
40	C07C7.1	C07C7.1	n/a	chrIV 9,184,575	contains similarity to Mycoplasma pulmonis Hypothetical protein MYPU_0790.; TR:Q98RD0
41	ZK688.7	ZK688.7	n/a	chrIII 7,911,165
42	clec-211	F19F10.6	n/a	chrV 7,560,915	C. elegans CLEC-211 protein; contains similarity to Interpro domain IPR016187 (C-type lectin fold)
43	pph-1	C05A2.1	n/a	chrV 10,703,698	C. elegans PPH-1 protein; contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
44	twk-35	F31D4.7	n/a	chrV 20,859,750	C. elegans TWK-35 protein; contains similarity to Pfam domain PF07885 Ion channel contains similarity to Interpro domains IPR003280 (Potassium channel, two pore-domain), IPR013099 (Ion transport 2)
45	T10B10.5	T10B10.5	n/a	chrX 15,197,450	contains similarity to Pfam domain PF00168 C2 domain contains similarity to Interpro domains IPR008973 (C2 calcium/lipid-binding region, CaLB), IPR000008 (C2 calcium-dependent membrane targeting)
46	K08D8.2	K08D8.2	n/a	chrIV 12,903,408	contains similarity to Arabidopsis thaliana Hypothetical protein.; TR:Q8GYZ7
47	srz-31	H12I19.2	n/a	chrIV 14,138,796	C. elegans SRZ-31 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
48	B0507.2	B0507.2	n/a	chrV 8,775,382	contains similarity to Interpro domain IPR004328 (BRO1)
49	col-123	W08D2.6	n/a	chrIV 9,822,477	col-123 is homologous to the human gene A TYPE IV COLLAGEN (COL6A1; OMIM:303631), which when mutated is sometimes associated with diffuse leiomyomatosis.
50	frm-3	H05G16.1	n/a	chrX 11,578,915	frm-3 encodes a protein containing a FERM domain (Band 4.1 family); expressed in a few cells in the head.