UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	F25E2.1	F25E2.1	0	chrX 803,494	contains similarity to Interpro domain IPR000276 (GPCR, rhodopsin-like)
2	srw-10	ZC482.6	n/a	chrIII 12,755,860	C. elegans SRW-10 protein ;
3	F46F5.15	F46F5.15	n/a	chrII 788,813
4	C56G7.2	C56G7.2	n/a	chrIII 3,387,880	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
5	grk-2	W02B3.2	n/a	chrIII 678,078	grk-2 encodes a serine/threonine protein kinase that is most closely related to G protein-coupled receptor (GPCR) kinases; in C. elegans, grk-2 activity is required in chemosensory neurons for normal calcium influx during chemosensation, but is not required for GPCR downregulation; in regulating chemosensation, GRK-2 likely acts upstream of the ODR-3/G alpha protein, as overexpression of ODR-3 can rescue abnormal avoidance behavior in grk-2 mutants; GRK-2 is broadly expressed in the adult nervous system, with expression beginning as early as the 20-30-cell stage of embryonic development and continuing into adulthood.
6	Y5F2A.3	Y5F2A.3	n/a	chrIV 11,069,794	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domain IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)
7	C46E10.2	C46E10.2	n/a	chrII 3,723,631
8	srj-27	T01G5.3	n/a	chrV 15,126,838	C. elegans SRJ-27 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
9	F46B3.8	F46B3.8	n/a	chrV 20,618,293	contains similarity to Pfam domain PF03380 Caenorhabditis protein of unknown function, DUF282 contains similarity to Interpro domain IPR005044 (Protein of unknown function DUF282, Caenorhabditis species)
10	C34D1.2	C34D1.2	n/a	chrV 13,236,368	contains similarity to Pfam domain PF00751 DM DNA binding domain contains similarity to Interpro domain IPR001275 (DM DNA-binding)
11	F45F2.1	F45F2.1	n/a	chrV 8,538,519	contains similarity to Pfam domain PF03189 Protein of unknown function, DUF270 contains similarity to Interpro domain IPR004878 (Protein of unknown function DUF270)
12	srz-58	F31E9.5	n/a	chrV 17,318,799	C. elegans SRZ-58 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
13	F11A5.7	F11A5.7	n/a	chrV 16,205,976	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
14	C45G3.4	C45G3.4	n/a	chrI 9,219,134	contains similarity to Dictyostelium discoideum Prespore-specific protein (Fragment).; TR:O97140
15	srw-86	C25F9.7	n/a	chrV 19,400,392	C. elegans SRW-86 protein ;
16	ubc-1	C35B1.1	n/a	chrIV 4,104,634	ubc-1 encodes an E2 ubiquitin-conjugating enzyme that contains a novel 40 amino acid C-terminal tail, and is homologous to Saccharomyces cerevisiae RAD6/UBC2 which is involved in DNA repair; although loss of UBC-1 activity via RNA-mediated interference (RNAi) does not result in any abnormalities, UBC-1 is able to complement the DNA repair defects of a Saccharomyces cerevisiae rad6 null mutant, suggesting that UBC-1 can function in the DNA repair pathway; ubc-1 mRNA is detectable in embryos.
17	R04E5.7	R04E5.7	n/a	chrX 8,797,318
18	Y54G9A.1	Y54G9A.1	n/a	chrII 13,700,041	contains similarity to Carabus linnei NADH dehydrogenase subunit 5 (Fragment).; TR:O79584
19	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
20	Y70C5C.3	Y70C5C.3	n/a	chrV 16,714,293	contains similarity to Pfam domain PF03269 Caenorhabditis protein of unknown function, DUF268 contains similarity to Interpro domain IPR004951 (Protein of unknown function DUF268, Caenorhabditis species)
21	W05H5.2	W05H5.2	n/a	chrII 12,442,169	contains similarity to Xanthomonas campestris Hypothetical protein.; TR:Q9Z3D0
22	Y116A8C.1	Y116A8C.1	n/a	chrIV 16,901,344	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domain IPR006583 (CW)
23	C41G6.12	C41G6.12	n/a	chrV 15,207,410	contains similarity to Interpro domain IPR000168 (Nematode 7TM chemoreceptor (probably olfactory))
24	ZK1240.6	ZK1240.6	n/a	chrII 2,322,661	contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger) contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR000315 (Zinc finger, B-box)
25	B0336.12	B0336.12	n/a	chrIII 5,710,236
26	Y37E11B.7	Y37E11B.7	n/a	chrIV 3,599,789
27	srz-6	T21B4.1	n/a	chrII 12,492,894	C. elegans SRZ-6 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
28	F44A2.2	F44A2.2	n/a	chrV 9,319,570	contains similarity to Pfam domains PF02214 (K+ channel tetramerisation domain) , PF07885 (Ion channel) , PF00520 (Ion transport protein) contains similarity to Interpro domains IPR005821 (Ion transport), IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR003971 (Potassium channel, voltage dependent, Kv9), IPR003968 (Potassium channel, voltage dependent, Kv), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation), IPR003091 (Voltage-dependent potassium channel), IPR013099 (Ion transport 2), IPR003974 (Potassium channel, voltage dependent, Kv3)
29	C50E3.9	C50E3.9	n/a	chrV 7,599,821	contains similarity to Interpro domain IPR001991 (Sodium:dicarboxylate symporter)
30	sri-37	D2062.2	n/a	chrII 2,630,401	C. elegans SRI-37 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
31	B0410.1	B0410.1	n/a	chrX 2,894,901
32	T05A6.5	T05A6.5	n/a	chrII 7,824,034	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
33	srw-91	K04F1.4	n/a	chrV 1,680,088	C. elegans SRW-91 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
34	T09F5.2	T09F5.2	n/a	chrV 15,151,275	contains similarity to Saccharomyces cerevisiae cell wall mannoprotein; SGD:YOR009W
35	srh-203	F20E11.10	n/a	chrV 17,455,364	C. elegans SRH-203 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
36	math-31	F52C6.6	n/a	chrII 1,912,654	C. elegans MATH-31 protein; contains similarity to Pfam domain PF00917 MATH domain contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH)
37	str-2	C50C10.7	0.0002	chrV 9,823,406	C. elegans STR-2 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
38	C04F5.2	C04F5.2	n/a	chrV 5,094,981
39	str-92	F59A1.3	n/a	chrV 17,675,766	C. elegans STR-92 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
40	C17B7.12	C17B7.12	n/a	chrV 3,353,590
41	C17H1.8	C17H1.8	n/a	chrI 13,129,308	contains similarity to Pyrococcus furiosus DNA double-strand break repair rad50 ATPase.; SW:P58301
42	R160.4	R160.4	n/a	chrX 4,367,984
43	T11F9.14	T11F9.14	n/a	chrV 11,480,742	contains similarity to Oryctolagus cuniculus Troponin I, fast skeletal muscle (Troponin I, fast-twitch isoform).; SW:TRIF_RABIT
44	ins-3	ZK75.3	n/a	chrII 5,990,388	ins-3 encodes one of several insulin-related peptides; INS-3 is classified as a Type-beta insulin based on the predicted arrangement of disulfide bonds; gfp gene fusions with the promoter and enhancer regions indicate that INS-3 is expressed in some amphid sensory neurons.
45	K02A2.5	K02A2.5	n/a	chrII 7,411,491
46	srh-208	C43D7.6	n/a	chrV 19,317,895	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
47	srd-39	R04D3.8	n/a	chrX 13,299,680	C. elegans SRD-39 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
48	H35N09.2	H35N09.2	n/a	chrX 8,604,813
49	C27A12.4	C27A12.4	n/a	chrI 6,037,041
50	C30G4.6	C30G4.6	n/a	chrX 17,077,020	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)