UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	F22D3.4	F22D3.4	0	chrII 6,925,039
2	C10G8.2	C10G8.2	n/a	chrV 5,314,980	contains similarity to Pfam domain PF00014 Kunitz/Bovine pancreatic trypsin inhibitor domain contains similarity to Interpro domain IPR002223 (Proteinase inhibitor I2, Kunitz metazoa)
3	Y57G11C.5	Y57G11C.5	n/a	chrIV 14,763,509	contains similarity to Interpro domain IPR000215 (Protease inhibitor I4, serpin)
4	R01H2.2	R01H2.2	n/a	chrIII 7,057,468	contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316) contains similarity to Interpro domains IPR005514 (Protein of unknown function DUF316), IPR009003 (Peptidase, trypsin-like serine and cysteine)
5	sfxn-1.4	C47D12.3	n/a	chrII 11,680,034	C. elegans SFXN-1.4 protein; contains similarity to Pfam domain PF03820 Tricarboxylate carrier contains similarity to Interpro domain IPR004686 (Tricarboxylate/iron carrier)
6	F57A8.6	F57A8.6	n/a	chrV 10,072,890	contains similarity to Pfam domain PF01666 DX module contains similarity to Interpro domain IPR002593 (Protein of unknown function DX)
7	F56F4.3	F56F4.3	n/a	chrI 6,142,912	contains similarity to Pfam domain PF00209 Sodium:neurotransmitter symporter family contains similarity to Interpro domains IPR000175 (Sodium:neurotransmitter symporter), IPR001411 (Tetracycline resistance protein, TetB), IPR002208 (SecY protein), IPR002229 (Blood group Rhesus C/E and D polypeptide)
8	ins-37	F08G2.6	n/a	chrII 13,835,294	ins-37 encodes an insulin-like peptide.
9	W09C3.8	W09C3.8	n/a	chrI 4,716,751
10	K08E7.4	K08E7.4	n/a	chrIV 12,570,933	contains similarity to Plasmodium falciparum Gene 11-1 protein precursor.; TR:Q8I6U6
11	H06H21.9	H06H21.9	n/a	chrIV 4,826,390	H06H21.9 encodes a Caenorhabditis-specific protein with two PDZ domains that inhibits CEP-1- and HUS-1-dependent germline apoptosis, as do BMK-1, RAD-50, and RAD-51.
12	C18H2.1	C18H2.1	n/a	chrIII 7,667,218	contains similarity to Pfam domains PF02206 (Domain of unknown function) (2), PF00023 (Ankyrin repeat) , PF00533 (BRCA1 C Terminus (BRCT) domain) (2)contains similarity to Interpro domains IPR002110 (Ankyrin), IPR003125 (Protein of unknown function WSN), IPR001357 (BRCT)
13	C17C3.5	C17C3.5	n/a	chrII 5,552,099	contains similarity to Pfam domain PF01827 FTH domain contains similarity to Interpro domain IPR002900 (Protein of unknown function DUF38, Caenorhabditis species)
14	W01B6.5	W01B6.5	n/a	chrIV 10,077,459	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif)
15	W03D8.3	W03D8.3	n/a	chrI 2,821,478	contains similarity to Interpro domain IPR000694 (Proline-rich region)
16	F54D1.1	F54D1.1	n/a	chrIV 11,262,424	contains similarity to Interpro domain IPR004087 (K Homology)
17	twk-6	F17C8.5	n/a	chrIII 4,743,772	twk-6 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains; as loss of TWK-6 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of TWK-6 in C. elegans development and/or behavior is not yet known; TWK-6 may, however, function redundantly with other TWK channels; TWK-6 is expressed in the hypodermis.
18	C18H2.3	C18H2.3	n/a	chrIII 7,685,691	contains similarity to Pfam domains PF00023 (Ankyrin repeat) (2), PF00533 (BRCA1 C Terminus (BRCT) domain) (2)contains similarity to Interpro domains IPR002110 (Ankyrin), IPR001357 (BRCT)
19	srh-125	C18B10.8	n/a	chrV 7,476,227	C. elegans SRH-125 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR001463 (Sodium:alanine symporter), IPR003002 (7TM chemoreceptor, subfamily 1)
20	Y37D8A.16	Y37D8A.16	n/a	chrIII 12,916,800	contains similarity to Cyanidioschyzon merolae Cytochrome C-type biogenesis protein CCMF.; TR:Q9ZZP7
21	F49E11.7	F49E11.7	n/a	chrIV 13,054,029	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
22	K02F6.1	K02F6.1	n/a	chrII 2,555,138	contains similarity to Pfam domain PF00098 Zinc knuckle contains similarity to Interpro domains IPR009007 (Peptidase aspartic, catalytic), IPR013084 (Zinc finger, CCHC retroviral-type), IPR001969 (Peptidase aspartic, active site), IPR001878 (Zinc finger, CCHC-type)
23	Y7A5A.5	Y7A5A.5	n/a	chrX 15,786,599	contains similarity to Pseudomonas aeruginosa NosL protein.; TR:Q9HYK8
24	T08H10.1	T08H10.1	n/a	chrV 4,484,972	contains similarity to Pfam domain PF00248 Aldo/keto reductase family contains similarity to Interpro domain IPR001395 (Aldo/keto reductase)
25	srh-61	T21B4.8	n/a	chrII 12,515,614	C. elegans SRH-61 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR001360 (Glycoside hydrolase, family 1)
26	F14E5.3	F14E5.3	n/a	chrII 8,436,197	contains similarity to Pfam domain PF00328 Histidine acid phosphatase contains similarity to Interpro domain IPR000560 (Histidine acid phosphatase)
27	C53D6.5	C53D6.5	n/a	chrIV 9,026,997	contains similarity to Enterococcus hirae V-type sodium pump subunit F (EC 3.6.3.14) (Na(+)-translocating ATPasessubunit F).; SW:P43437
28	T27E4.6	T27E4.6	n/a	chrV 9,071,672	contains similarity to Interpro domain IPR006621 (Nose resistant to fluoxetine-4, N-terminal)
29	F27C8.5	F27C8.5	n/a	chrIV 9,591,134	contains similarity to Pfam domain PF00651 BTB/POZ domain contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ)
30	C31H1.2	C31H1.2	n/a	chrIV 5,792,361	contains similarity to Pfam domain PF02013 Cellulose or protein binding domain contains similarity to Interpro domains IPR003616 (Post-SET zinc-binding region), IPR000215 (Protease inhibitor I4, serpin), IPR002883 (Dockerin, cellulose-binding family V)
31	nas-5	T23H4.3	n/a	chrI 9,887,167	nas-5 encodes an astacin-like metalloprotease; loss of nas-5 activity in an RNAi hypersensitive strain results in axon guidance defects, including a failure of DD/VD motoneuron commissures to reach the dorsal cord, defasciculation of the dorsal nerve cord, and midline crossing defects in the ventral nerve cord.
32	try-6	F48A9.3	n/a	chrI 6,586,594	C. elegans TRY-6 protein; contains similarity to Pfam domains PF00089 (Trypsin) , PF03761 (Domain of unknown function (DUF316)) contains similarity to Interpro domains IPR001314 (Peptidase S1A, chymotrypsin), IPR001254 (Peptidase S1 and S6, chymotrypsin/Hap), IPR005514 (Protein of unknown function DUF316), IPR009003 (Peptidase, trypsin-like serine and cysteine)
33	T11A5.1	T11A5.1	n/a	chrV 9,859,109	contains similarity to Pfam domain PF02178 AT hook motif contains similarity to Interpro domains IPR000637 (HMG-I and HMG-Y, DNA-binding), IPR008162 (Inorganic pyrophosphatase)
34	C08A9.3	C08A9.3	n/a	chrX 17,089,713	contains similarity to Homo sapiens SIDT1 protein; ENSEMBL:ENSP00000377416
35	R12H7.4	R12H7.4	n/a	chrX 13,217,956	contains similarity to Homo sapiens similar to zinc-finger helicase; ENSEMBL:ENSP00000304137
36	Y37A1A.2	Y37A1A.2	n/a	chrIV 13,909,126	contains similarity to Pfam domain PF05978 Eukaryotic protein of unknown function (DUF895) contains similarity to Interpro domains IPR010291 (Protein of unknown function DUF895, eukaryotic), IPR016196 (MFS general substrate transporter)
37	H04J21.1	H04J21.1	n/a	chrIII 2,369,757	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domains IPR010996 (DNA-directed DNA polymerase, family X, beta-like, N-terminal), IPR000626 (Ubiquitin), IPR003125 (Protein of unknown function WSN)
38	C14A6.7	C14A6.7	n/a	chrV 18,167,965	contains similarity to Gallus gallus Stathmin 3 (SCG10-like protein) (Neuroplasticin-2).; SW:STN3_CHICK
39	C27C7.5	C27C7.5	n/a	chrI 11,425,014	contains similarity to Pfam domains PF00337 (Galactoside-binding lectin) , PF08277 (PAN-like domain) contains similarity to Interpro domains IPR006583 (CW), IPR001079 (Galectin, galactose-binding lectin), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup), IPR008985 (Concanavalin A-like lectin/glucanase)
40	R13F6.5	R13F6.5	n/a	chrIII 6,848,166	contains similarity to Pfam domain PF01529 DHHC zinc finger domain contains similarity to Interpro domain IPR001594 (Zinc finger, DHHC-type)
41	C26B2.2	C26B2.2	n/a	chrIV 8,021,582
42	F22B8.7	F22B8.7	n/a	chrV 16,096,242	contains similarity to Pfam domains PF03473 (MOSC domain) , PF03476 (MOSC N-terminal beta barrel domain) contains similarity to Interpro domains IPR005303 (MOSC, N-terminal beta barrel), IPR005302 (Molybdenum cofactor sulphurase, C-terminal), IPR011037 (Pyruvate kinase, beta-barrel-like)
43	F11D5.5	F11D5.5	n/a	chrX 3,302,988	contains similarity to Interpro domain IPR016196 (MFS general substrate transporter)
44	C02F5.2	C02F5.2	n/a	chrIII 8,249,732
45	K02D10.2	K02D10.2	n/a	chrIII 8,770,897
46	C04B4.5	C04B4.5	n/a	chrX 12,287,929	contains similarity to Plasmodium falciparum Ring-infected erythrocyte surface antigen precursor.; TR:Q8I0U6
47	R04B5.1	R04B5.1	n/a	chrV 10,078,069	contains similarity to Culex nigripalpus baculovirus Putative 33 kDa early protein (CUN014 similar to AcMNPV ORF92).; TR:Q99GP2
48	R09B5.12	R09B5.12	n/a	chrV 1,455,855	contains similarity to Interpro domains IPR011583 (Chitinase II), IPR017853 (Glycoside hydrolase, catalytic core)
49	ZC477.2	ZC477.2	n/a	chrIV 7,109,050	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
50	srt-44	M199.1	n/a	chrIV 15,105,017	C. elegans SRT-44 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)