UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	F20A1.2	F20A1.2	0	chrV 7,047,678	contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
2	sri-37	D2062.2	n/a	chrII 2,630,401	C. elegans SRI-37 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
3	W02B3.7	W02B3.7	n/a	chrIII 691,490	contains similarity to Interpro domain IPR009644 (Fukutin-related)
4	srj-8	T28A11.9	n/a	chrV 3,248,476	C. elegans SRJ-8 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
5	Y43F8C.17	Y43F8C.17	n/a	chrV 19,712,303	contains similarity to Rhodosporidium toruloides Rhodotorucine A precursor 2.; SW:RHT2_RHOTO
6	clec-130	W10G11.14	n/a	chrII 3,574,098	C. elegans CLEC-130 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
7	F19H6.5	F19H6.5	n/a	chrX 12,364,231	contains similarity to Homo sapiens Splice isoform 1 of O75143 Hypothetical protein KIAA0652; ENSEMBL:ENSP00000310321
8	K04H8.3	K04H8.3	n/a	chrI 14,256,314	contains similarity to Bacteroides thetaiotaomicron Putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismatesmutase.; TR:Q8A0T7
9	F56C3.8	F56C3.8	n/a	chrX 1,384,495
10	T19D2.3	T19D2.3	n/a	chrX 3,939,726
11	cwp-2	C37H5.11	n/a	chrV 4,842,261	cwp-2 encodes a nematode-specific protein that is coexpressed with lov-1 and pkd-2.
12	clec-108	Y26D4A.6	n/a	chrI 13,081,794	C. elegans CLEC-108 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
13	Y39F10A.3	Y39F10A.3	n/a	chrII 782,448	contains similarity to Pfam domain PF05050 Protein of unknown function (DUF672) contains similarity to Interpro domain IPR007744 (Protein of unknown function DUF672)
14	clec-232	F36G9.11	n/a	chrV 15,976,833	C. elegans CLEC-232 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
15	F44D12.8	F44D12.8	n/a	chrIV 10,024,253	contains similarity to Homo sapiens Isoform 1 of MAP7 domain-containing protein 1; ENSEMBL:ENSP00000362244
16	clec-106	Y18D10A.12	n/a	chrI 12,866,497	C. elegans CLEC-106 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
17	clec-96	ZK39.5	n/a	chrI 11,151,582	C. elegans CLEC-96 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin), IPR001202 (WW/Rsp5/WWP)
18	F49F1.3	F49F1.3	n/a	chrIV 4,115,363	contains similarity to Interpro domain IPR000694 (Proline-rich region)
19	C09G12.5	C09G12.5	n/a	chrIV 3,479,529
20	F25C8.1	F25C8.1	n/a	chrV 20,903,971	contains similarity to Pfam domains PF01756 (Acyl-CoA oxidase) , PF02770 (Acyl-CoA dehydrogenase, middle domain) contains similarity to Interpro domains IPR013786 (Acyl-CoA dehydrogenase/oxidase, N-terminal), IPR006091 (Acyl-CoA dehydrogenase/oxidase, central region), IPR013764 (Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal), IPR012258 (Acyl-CoA oxidase), IPR009100 (Acyl-CoA dehydrogenase/oxidase, middle and N-terminal), IPR002655 (Acyl-CoA oxidase, C-terminal), IPR009075 (Acyl-CoA dehydrogenase/oxidase C-terminal)
21	clec-158	R13F6.8	n/a	chrIII 6,859,120	C. elegans CLEC-158 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR001304 (C-type lectin)
22	K12H6.5	K12H6.5	n/a	chrII 2,826,180
23	F49F1.11	F49F1.11	n/a	chrIV 4,140,539	contains similarity to Pfam domain PF00337 Galactoside-binding lectin contains similarity to Interpro domains IPR001079 (Galectin, galactose-binding lectin), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup), IPR008985 (Concanavalin A-like lectin/glucanase)
24	E02H9.9	E02H9.9	n/a	chrIII 2,467,742
25	R107.2	R107.2	n/a	chrIII 9,044,850	contains similarity to Pfam domain PF01256 Carbohydrate kinase contains similarity to Interpro domain IPR000631 (Carbohydrate kinase)
26	F55C12.6	F55C12.6	n/a	chrII 5,875,271	contains similarity to Pfam domain PF06852 Protein of unknown function (DUF1248) contains similarity to Interpro domain IPR009658 (Protein of unknown function DUF1248)
27	nhr-225	T27B7.2	n/a	chrV 2,289,169	C. elegans NHR-225 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
28	Y66A7A.4	Y66A7A.4	n/a	chrIII 11,614,038
29	srh-166	Y38H6C.12	n/a	chrV 20,520,671	C. elegans SRH-166 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
30	nas-19	K03B8.5	n/a	chrV 11,402,129	nas-19 encodes an astacin-like metalloprotease; large-scale expression studies reveal that a nas-19::GFP promoter fusion is expressed in the pharynx, intestine, vulva, and reproductive system.
31	F47C12.8	F47C12.8	n/a	chrIV 3,997,448	contains similarity to Pfam domain PF05912 Caenorhabditis elegans protein of unknown function (DUF870) contains similarity to Interpro domain IPR008588 (Protein of unknown function DUF870, Caenorhabditis species)
32	R53.8	R53.8	n/a	chrII 9,977,190	contains similarity to Homo sapiens Putative uncharacterized protein (Fragment); ENSEMBL:ENSP00000333119
33	F46F5.14	F46F5.14	n/a	chrII 800,774	contains similarity to Pfam domain PF03314 Protein of unknown function, DUF273 contains similarity to Interpro domain IPR004988 (Protein of unknown function DUF273)
34	T10D4.7	T10D4.7	n/a	chrII 3,118,051	contains similarity to Pfam domain PF02343 Domain of unknown function DUF130 contains similarity to Interpro domain IPR003326 (Protein of unknown function DUF130)
35	F32B6.10	F32B6.10	n/a	chrIV 9,888,531	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
36	ZK380.2	ZK380.2	n/a	chrX 1,633,167	contains similarity to Interpro domain IPR011072 (HR1 rho-binding repeat)
37	K12H6.8	K12H6.8	n/a	chrII 2,828,347
38	clec-207	F36F12.5	n/a	chrV 2,096,664	C. elegans CLEC-207 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
39	C25F9.8	C25F9.8	n/a	chrV 19,395,796	contains similarity to Nicotiana glutinosa Ribonuclease NW.; TR:Q7XZV5
40	cwp-1	C37H5.10	n/a	chrV 4,840,930	cwp-1 encodes a nematode-specific protein that is coexpressed with lov-1 and pkd-2.
41	grd-5	F41E6.2	n/a	chrV 8,619,427	grd-5 encodes a hedgehog-like protein, with an N-terminal signal sequence and a C-terminal Ground domain; GRD-5 is expressed in adult anterior and posterior seam cells, overlapping GRD-3 expression; the Ground domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins; GRD-5 is weakly required for normal molting; GRD-5 is also required for normal adult alae formation, growth to full size, and locomotion; all of these requirements may reflect common defects in cholesterol-dependent hedgehog-like signalling or in vesicle trafficking.
42	C16C8.8	C16C8.8	n/a	chrII 3,461,412
43	scl-15	F02E11.5	n/a	chrII 3,284,156	C. elegans SCL-15 protein; contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1 related)
44	C35B1.3	C35B1.3	n/a	chrIV 4,081,235
45	clec-126	W09G10.5	n/a	chrII 3,519,952	C. elegans CLEC-126 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
46	clec-124	C17F4.1	n/a	chrII 3,250,580	C. elegans CLEC-124 protein; contains similarity to Interpro domain IPR016187 (C-type lectin fold)
47	F35C5.4	F35C5.4	n/a	chrII 12,891,236	contains similarity to Homo sapiens Mucin-2 precursor; ENSEMBL:ENSP00000351956
48	ubc-24	F49E12.4	n/a	chrII 8,406,159	ubc-24 encodes a predicted conjugating enzyme (UBCs/E2s) of the ubiquitin-conjugation system.
49	scl-7	C39E9.5	n/a	chrIV 13,070,819	C. elegans SCL-7 protein; contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1 related)
50	clec-217	F26D11.9	n/a	chrV 7,958,038	C. elegans CLEC-217 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)