UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	sulp-2	F14D12.5	0	chrX 5,597,522	sulp-2 encodes one of eight C. elegans members of the sulfate permease family of anion transporters; by homology, SULP-2 is predicted to function as an anion transporter that regulates cellular pH and volume via transmembrane movement of electrolytes and fluids and when expressed in Xenopus oocytes, SULP-2 does exhibit modest uptake of sulfate; a SULP-2::GFP fusion is expressed in the intestine and rectal gland cells, where it localizes to the basolateral membrane and in cephalic and deirid neurons, where it localizes to sensillar endings.
2	srh-119	Y102A5C.21	n/a	chrV 16,973,230	C. elegans SRH-119 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
3	Y57A10C.10	Y57A10C.10	n/a	chrII 12,440,350	contains similarity to Pfam domain PF01838 (Domain of unknown function DUF40)
4	M01A8.1	M01A8.1	n/a	chrIII 9,259,292	contains similarity to Homo sapiens Hypothetical protein KIAA0544; ENSEMBL:ENSP00000262370
5	nhr-79	T26H2.9	n/a	chrV 19,209,750	C. elegans NHR-79 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
6	R06A10.3	R06A10.3	n/a	chrI 1,078,831
7	C25E10.7	C25E10.7	n/a	chrV 9,050,528	C25E10.7 encodes a putative secreted TIL-domain protease inhibitor paralogous to SWM-1, ISL-1, and the products of 11 other C. elegans genes; C25E10.7 and its relatives are collectively similar to other TIL-domain protease inhibitors from nematodes, insects, and vertebrates; C25E10.7 has no obvious function in mass RNAi assays.
8	ZC404.1	ZC404.1	n/a	chrV 6,794,516
9	F18E3.10	F18E3.10	n/a	chrV 7,424,056	contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
10	srab-21	T20D4.18	n/a	chrV 3,423,693	C. elegans SRAB-21 protein; contains similarity to Pfam domain PF02117 C.elegans Sra family integral membrane protein contains similarity to Interpro domain IPR000344 (Nematode chemoreceptor, Sra)
11	C09B9.1	C09B9.1	n/a	chrIV 5,039,116
12	T14B1.2	T14B1.2	n/a	chrX 9,651,998	contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
13	Y75B8A.28	Y75B8A.28	n/a	chrIII 12,320,885	contains similarity to Saccharomyces cerevisiae Required for START A of cell cycle, and glucose and nitrogen repression of sporulation; SGD:YJL005W
14	F40G12.9	F40G12.9	n/a	chrV 14,282,717	contains similarity to Pfam domain PF04942 (CC domain)
15	C47E8.3	C47E8.3	n/a	chrV 14,681,957	contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
16	tag-89	H02I12.3	n/a	chrIV 11,395,562	C. elegans TAG-89 protein; contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
17	C50E3.7	C50E3.7	n/a	chrV 7,595,623	contains similarity to Interpro domain IPR001499 (Fungal pheromone STE3 GPCR)
18	srab-4	C33G8.5	n/a	chrV 7,004,969	C. elegans SRAB-4 protein ;
19	C31E10.5	C31E10.5	n/a	chrX 13,993,587	contains similarity to Homo sapiens Splice isoform 1 of Q92614 Myosin XVIIIA; ENSEMBL:ENSP00000332202
20	sra-28	F18C5.6	n/a	chrII 6,572,192	C. elegans SRA-28 protein; contains similarity to Pfam domain PF02117 C.elegans Sra family integral membrane protein contains similarity to Interpro domain IPR000344 (Nematode chemoreceptor, Sra)
21	C37H5.2	C37H5.2	n/a	chrV 4,848,674	contains similarity to Pfam domain PF00561 alpha/beta hydrolase fold contains similarity to Interpro domains IPR000073 (Alpha/beta hydrolase fold-1), IPR000639 (Epoxide hydrolase-like), IPR003089 (Alpha/beta hydrolase), IPR002410 (Peptidase S33, prolyl aminopeptidase)
22	T21B10.6	T21B10.6	n/a	chrII 8,945,096	contains similarity to Pfam domain PF00100 Zona pellucida-like domain contains similarity to Interpro domain IPR001507 (Endoglin/CD105 antigen)
23	sri-54	T10D4.8	n/a	chrII 3,136,737	C. elegans SRI-54 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR001411 (Tetracycline resistance protein, TetB)
24	sprr-1	R03A10.6	n/a	chrX 15,467,342	C. elegans SPRR-1 protein; contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
25	C01G6.7	C01G6.7	n/a	chrII 9,292,949	contains similarity to Pfam domain PF00501 AMP-binding enzyme contains similarity to Interpro domain IPR000873 (AMP-dependent synthetase and ligase)
26	ugt-55	T04H1.7	n/a	chrV 12,257,184	C. elegans UGT-55 protein; contains similarity to Pfam domain PF00201 UDP-glucoronosyl and UDP-glucosyl transferase contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)
27	R10F2.6	R10F2.6	n/a	chrIII 2,940,362	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)
28	gnrr-7	F13D2.3	n/a	chrX 11,186,568	C. elegans GNRR-7 protein; contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
29	C10A4.5	C10A4.5	n/a	chrX 7,394,900
30	F10C2.7	F10C2.7	n/a	chrV 12,055,113	contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domains IPR007114 (Major facilitator superfamily), IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
31	W03B1.5	W03B1.5	n/a	chrIV 4,350,140	contains similarity to Interpro domain IPR000694 (Proline-rich region)
32	amt-3	M195.3	n/a	chrII 8,366,108	amt-3 encodes one of four C. elegans homologs of AMT1 (AT11_ARATH), a high-affinity ammonium transporter from Arabidopsis thaliana; AMT-3 is closely similar to its paralog AMT-2, with somewhat more distant paralogy to AMT-1 and AMT-4.
33	F16B12.7	F16B12.7	n/a	chrX 14,109,051	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
34	F48G7.10	F48G7.10	n/a	chrV 634,518	contains similarity to Pfam domain PF00130 Phorbol esters/diacylglycerol binding domain (C1 domain) contains similarity to Interpro domains IPR015727 (Protein kinase C mu-related), IPR002219 (Protein kinase C, phorbol ester/diacylglycerol binding)
35	sri-21	T24A6.4	n/a	chrV 3,550,559	C. elegans SRI-21 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
36	T24H10.5	T24H10.5	n/a	chrII 9,103,999	contains similarity to Arthrobacter sp C2-2 Putative histidine kinase.; TR:Q8KRF2
37	nhr-173	C56E10.1	n/a	chrX 6,657,606	C. elegans NHR-173 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
38	ncx-5	Y32F6B.2	n/a	chrV 10,488,232	ncx-5 encodes a putative 4Na[+]/1Ca[2+],1K[+] exchanger, orthologous to human SLC24A1-5 and paralogous to NCX-4; NCX-5 is predicted to export free cytoplasmic Ca[2+] with low affinity but high capacity, being complemented by low-capacity/high-affinity Ca[2+] ATPase pumps such as MCA-1/-3; NCX-5 has tandem Calx-alpha domains predicted to carry out ion transport; NCX-5 has no obvious function in mass RNAi assays.
39	B0554.7	B0554.7	n/a	chrV 439,300	contains similarity to Pfam domains PF07690 (Major Facilitator Superfamily) , PF05978 (Eukaryotic protein of unknown function (DUF895)) contains similarity to Interpro domains IPR010291 (Protein of unknown function DUF895, eukaryotic), IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
40	F31F7.3	F31F7.3	n/a	chrV 6,269,506
41	twk-40	T28A8.1	n/a	chrIII 13,487,791	C. elegans TWK-40 protein; contains similarity to Pfam domain PF07885 Ion channel contains similarity to Interpro domains IPR003280 (Potassium channel, two pore-domain), IPR003938 (Potassium channel, voltage-dependent, EAG/ELK/ERG), IPR013099 (Ion transport 2), IPR003092 (Potassium channel, two pore-domain, TASK)
42	srg-53	T02B11.1	n/a	chrV 880,685	C. elegans SRG-53 protein ;
43	C33G8.2	C33G8.2	n/a	chrV 7,011,095	contains similarity to Interpro domains IPR002038 (Osteopontin), IPR005448 (Voltage-dependent calcium channel, P/Q-type, alpha-1 subunit)
44	ZK945.8	ZK945.8	n/a	chrII 10,108,812	contains similarity to Pfam domain PF07491 Protein phosphatase inhibitor contains similarity to Interpro domain IPR011107 (Protein phosphatase inhibitor)
45	C17D12.7	C17D12.7	n/a	chrI 11,607,946	contains similarity to Saccharomyces cerevisiae Protein involved in bud-site selection; diploid mutants display a unipolar budding pattern instead of the wild-type bipolar pattern; SGD:YGL174W
46	R12C12.4	R12C12.4	n/a	chrII 6,039,457
47	B0403.3	B0403.3	n/a	chrX 7,062,539
48	T13A10.2	T13A10.2	n/a	chrIV 6,253,526	contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger) contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type)
49	str-52	C45H4.12	n/a	chrV 2,145,082	C. elegans STR-52 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
50	str-57	T06C12.2	n/a	chrV 15,871,734	C. elegans STR-57 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)