UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	F07D3.3	F07D3.3	2e-151	chrV 9,461,634	contains similarity to Listeria monocytogenes Shikimate 5-dehydrogenase (EC 1.1.1.25).; SW:AROE_LISMO
2	nlp-4	F59C6.6	n/a	chrI 10,516,896	nlp-4 encodes three predicted neuropeptide-like proteins; nlp-4 has no none homologs in other nematode species, and its expression pattern has not been determined; in addition, as loss of nlp-4 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of nlp-4-encoded peptides in development and/or behavior is not yet known.
3	C50F2.5	C50F2.5	n/a	chrI 3,896,598	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)
4	F33D11.7	F33D11.7	n/a	chrI 5,850,957	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
5	spe-26	R10H10.2	n/a	chrIV 10,390,752	spe-26 encodes a Kelch motif-containing protein similar to the Drosophila proteins kelch and diablo and the Limulus (horseshoe crab) actin-bundling protein scruin; SPE-26 activity is required for several processes including embryogenesis, spermatogenesis, thermotolerance, and regulation of lifespan; SPE-26 mRNA is detected in spermatogonial cells and spermatocytes, but not in spermatids.
6	F36H1.3	F36H1.3	n/a	chrIV 11,050,996	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000694 (Proline-rich region), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
7	K09C6.8	K09C6.8	n/a	chrV 841,718	contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core)
8	ZK673.6	ZK673.6	n/a	chrII 10,463,519	contains similarity to Hydra attenuata Myosin heavy chain, clone 203 (Fragment).; SW:MYS3_HYDAT
9	C33F10.12	C33F10.12	n/a	chrII 4,837,006	contains similarity to Pfam domain PF00153 Mitochondrial carrier protein contains similarity to Interpro domains IPR002067 (Mitochondrial carrier protein), IPR001993 (Mitochondrial substrate carrier), IPR000802 (Arsenical pump membrane protein), IPR002113 (Adenine nucleotide translocator 1)
10	cpb-2	C30B5.3	n/a	chrII 6,193,942	cpb-2 encodes a cytoplasmic polyadenylation element binding (CPEB) protein homolog, expressed specifically in the spermatogenic germ line; CPB-2 is dispensable for oogenesis, in contrast to CPEBs in vertebrates (Xenopus), arthropods (Drosophila), and molluscs (Spisula), which all participate in oogenesis.
11	C44B9.2	C44B9.2	n/a	chrIII 10,876,618	contains similarity to Interpro domain IPR000276 (GPCR, rhodopsin-like)
12	C05C12.1	C05C12.1	n/a	chrIV 11,254,815	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
13	F42G4.2	F42G4.2	n/a	chrII 13,049,257	contains similarity to Homo sapiens Transcription initiation factor TFIID subunit 3; ENSEMBL:ENSP00000340271
14	F56F3.4	F56F3.4	n/a	chrIII 4,469,813	contains similarity to Pfam domains PF00240 (Ubiquitin family) , PF01428 (AN1-like Zinc finger) contains similarity to Interpro domains IPR000058 (Zinc finger, AN1-type), IPR000626 (Ubiquitin)
15	tag-164	Y76A2A.1	n/a	chrIII 13,459,975	C. elegans TAG-164 protein; contains similarity to Interpro domain IPR008962 (PapD-like)
16	F36A2.12	F36A2.12	n/a	chrI 8,826,422
17	M04G7.2	M04G7.2	n/a	chrIV 459,290	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
18	M70.1	M70.1	n/a	chrIV 2,249,128	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domains IPR003004 (Bacterial general secretion pathway protein F), IPR003125 (Protein of unknown function WSN)
19	spe-8	F53G12.6	n/a	chrI 119,489	C. elegans SPE-8 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR015425 (Actin-binding FH2), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR000694 (Proline-rich region), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
20	K06A5.3	K06A5.3	n/a	chrI 6,467,184	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
21	ZK930.7	ZK930.7	n/a	chrII 11,914,880	contains similarity to Homo sapiens Mucin; TR:Q14851
22	F10G8.1	F10G8.1	n/a	chrI 10,020,359	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase), IPR000340 (Protein-tyrosine phosphatase, dual specificity)
23	C09H5.7	C09H5.7	n/a	chrV 8,084,660	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
24	AH10.1	AH10.1	n/a	chrV 14,147,624	contains similarity to Pfam domain PF00501 AMP-binding enzyme contains similarity to Interpro domain IPR000873 (AMP-dependent synthetase and ligase)
25	M88.3	M88.3	n/a	chrIII 4,544,265	contains similarity to Interpro domain IPR001841 (Zinc finger, RING-type)
26	C14A4.8	C14A4.8	n/a	chrII 10,597,545	contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
27	F58H1.6	F58H1.6	n/a	chrV 11,943,743	contains similarity to Interpro domains IPR000742 (EGF-like, type 3), IPR013032 (EGF-like region, conserved site)
28	F40F12.3	F40F12.3	n/a	chrIII 9,919,252
29	F13A7.1	F13A7.1	n/a	chrV 16,377,088	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000363 (Adrenergic receptor, alpha-1A), IPR002952 (Eggshell protein), IPR000535 (Major sperm protein)
30	ZK507.1	ZK507.1	n/a	chrIII 9,100,387	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
31	Y44A6D.5	Y44A6D.5	n/a	chrV 20,797,500	contains similarity to Pfam domain PF01063 Aminotransferase class IV contains similarity to Interpro domains IPR001544 (Aminotransferase, class IV), IPR005786 (Branched-chain amino acid aminotransferase II)
32	tag-316	T01B11.4	n/a	chrIV 8,459,731	C. elegans TAG-316 protein; contains similarity to Pfam domain PF00153 Mitochondrial carrier protein contains similarity to Interpro domains IPR002067 (Mitochondrial carrier protein), IPR002030 (Mitochondrial brown fat uncoupling protein), IPR001993 (Mitochondrial substrate carrier), IPR002113 (Adenine nucleotide translocator 1)
33	F33D11.1	F33D11.1	n/a	chrI 5,852,462	contains similarity to Pfam domain PF00412 LIM domain contains similarity to Interpro domain IPR001781 (Zinc finger, LIM-type)
34	C38C10.3	C38C10.3	n/a	chrIII 9,384,785	contains similarity to Pfam domain PF04370 Domain of unknown function (DUF508) contains similarity to Interpro domain IPR007465 (Protein of unknown function DUF508)
35	T28C6.5	T28C6.5	n/a	chrIV 8,822,105	contains similarity to Interpro domains IPR000909 (Phospholipase C, phosphatidylinositol-specific , X region), IPR000023 (Phosphofructokinase)
36	B0252.5	B0252.5	n/a	chrII 6,917,923
37	Y41C4A.7	Y41C4A.7	n/a	chrIII 11,699,359	contains similarity to Interpro domain IPR008962 (PapD-like)
38	his-70	E03A3.4	n/a	chrIII 4,059,902	his-70 encodes an H3 histone.
39	C04G2.5	C04G2.5	n/a	chrIV 10,094,710	contains similarity to Arabidopsis thaliana Putative auxin-induced protein.; TR:Q9SKP3
40	F58G1.3	F58G1.3	n/a	chrII 12,927,067	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
41	F14F7.4	F14F7.4	n/a	chrIII 13,028,908	contains similarity to Interpro domain IPR003944 (Protease-activated receptor 4)
42	C01G12.8	C01G12.8	n/a	chrII 14,595,473	contains similarity to Pfam domains PF00689 (Cation transporting ATPase, C-terminus) , PF00122 (E1-E2 ATPase) , PF00702 (haloacid dehalogenase-like hydrolase) , PF00690 (Cation transporter/ATPase, N-terminus) contains similarity to Interpro domains IPR005775 (ATPase, P-type cation exchange, alpha subunit, eukaryotic), IPR008250 (E1-E2 ATPase-associated region), IPR006069 (ATPase, P-type cation exchange, alpha subunit), IPR004014 (ATPase, P-type cation-transporter, N-terminal), IPR001757 (ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter), IPR006068 (ATPase, P-type cation-transporter, C-terminal), IPR005834 (Haloacid dehalogenase-like hydrolase), IPR000695 (H+ transporting ATPase, proton pump)
43	M05B5.1	M05B5.1	n/a	chrI 7,178,689	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
44	nspb-7	C01G12.2	n/a	chrII 14,578,358	C. elegans NSPB-7 protein ;
45	F59C6.2	F59C6.2	n/a	chrI 10,523,017	contains similarity to Pfam domain PF01529 DHHC zinc finger domain contains similarity to Interpro domain IPR001594 (Zinc finger, DHHC-type)
46	F57F4.1	F57F4.1	n/a	chrV 6,391,469	contains similarity to Mus musculus Acyl-coenzyme A thioesterase 9, mitochondrial precursor (EC 3.1.2.-)s(Acyl-CoA thioesterase 9) (Acyl-CoA thioester hydrolase 9) (Acylscoenzyme A thioester hydrolase 2) (48 kDa acyl-CoA thioestershydrolase) (p48) (Mt-ACT48.1) (Protein U8) (MTE-2).; SW:Q9R0X4
47	B0393.4	B0393.4	n/a	chrIII 4,761,650	contains similarity to Interpro domain IPR000694 (Proline-rich region)
48	F42G8.8	F42G8.8	n/a	chrIV 8,120,646	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
49	T05F1.8	T05F1.8	n/a	chrI 9,643,072	contains similarity to Pfam domain PF00153 Mitochondrial carrier protein contains similarity to Interpro domains IPR002067 (Mitochondrial carrier protein), IPR001993 (Mitochondrial substrate carrier), IPR000802 (Arsenical pump membrane protein), IPR002113 (Adenine nucleotide translocator 1)
50	F55C12.6	F55C12.6	n/a	chrII 5,875,271	contains similarity to Pfam domain PF06852 Protein of unknown function (DUF1248) contains similarity to Interpro domain IPR009658 (Protein of unknown function DUF1248)