UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	srx-46	E02C12.2	3.9999999999999997e-168	chrV 9,353,867	C. elegans SRX-46 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
2	Y51H1A.7	Y51H1A.7	n/a	chrII 13,897,024	contains similarity to Interpro domains IPR000637 (HMG-I and HMG-Y, DNA-binding), IPR000783 (RNA polymerase, subunit H/Rpb5 C-terminal)
3	ZK218.4	ZK218.4	n/a	chrV 17,100,011	contains similarity to Interpro domain IPR000434 (Polycystic kidney disease type 1 protein)
4	Y7A5A.7	Y7A5A.7	n/a	chrX 15,802,663	contains similarity to Murine herpesvirus 72 Membrane virion glycoprotein 150.; TR:Q9DYE3
5	C46H11.3	C46H11.3	n/a	chrI 5,041,773	contains similarity to Pfam domain PF04699 ARP2/3 complex 16 kDa subunit (p16-Arc) contains similarity to Interpro domains IPR006789 (ARP2/3 complex 16 kDa subunit (p16-Arc)), IPR002052 (N-6 adenine-specific DNA methylase, conserved site)
6	K10B4.4	K10B4.4	n/a	chrII 124,170	contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR002286 (P2 purinoceptor), IPR005390 (Neuromedin U receptor), IPR000276 (GPCR, rhodopsin-like)
7	clec-195	Y116A8C.21	n/a	chrIV 17,044,558	C. elegans CLEC-195 protein; contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domains IPR006583 (CW), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
8	B0432.1	B0432.1	n/a	chrII 298,462
9	nhr-150	C06B8.1	n/a	chrV 15,480,433	C. elegans NHR-150 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
10	fkh-5	F26A1.2	n/a	chrIII 4,845,567	fkh-5 encodes a member of the forkhead domain transcription factor family.
11	C18H7.1	C18H7.1	n/a	chrIV 618,237	contains similarity to Pfam domain PF00092 von Willebrand factor type A domain contains similarity to Interpro domain IPR002035 (von Willebrand factor, type A)
12	srg-44	F31E9.2	n/a	chrV 17,329,671	C. elegans SRG-44 protein; contains similarity to Pfam domain PF02118 C.elegans Srg family integral membrane protein contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
13	F58A3.4	F58A3.4	n/a	chrX 11,010,149	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
14	C03E10.1	C03E10.1	n/a	chrV 11,291,855	contains similarity to Anopheles quadrimaculatus NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3).; SW:NU4M_ANOQU
15	str-205	C02E7.9	n/a	chrV 4,929,096	C. elegans STR-205 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
16	rrf-2	M01G12.12	n/a	chrI 12,102,320	rrf-2 encodes an RNA-directed RNA polymerase (RdRP) homolog of unknown function; RRF-2 is not obviously required for either somatic or germline RNAi, or for transitive RNAi.
17	F59B2.11	F59B2.11	n/a	chrIII 9,014,893	contains similarity to Homo sapiens hypothetical protein; VG:OTTHUMP00000025312
18	C40A11.5	C40A11.5	n/a	chrII 2,134,686	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
19	ace-2	Y44E3A.2	n/a	chrI 3,304,491	An acetylcholineesterase involved in the termination of cholinergic nerve transmission; it is predominantly expressed in motoneurons.
20	scl-18	T12A7.3	n/a	chrIV 11,754,015	C. elegans SCL-18 protein; contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1 related), IPR002052 (N-6 adenine-specific DNA methylase, conserved site)
21	srx-122	F35F10.8	n/a	chrV 3,296,984	C. elegans SRX-122 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
22	ZK512.2	ZK512.2	n/a	chrIII 9,143,217	contains similarity to Pfam domains PF00270 (DEAD/DEAH box helicase) , PF00271 (Helicase conserved C-terminal domain) contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR000629 (RNA helicase, ATP-dependent, DEAD-box, conserved site), IPR014021 (Helicase, superfamily 1 and 2, ATP-binding), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal)
23	F56C3.7	F56C3.7	n/a	chrX 1,370,660
24	F55D1.2	F55D1.2	n/a	chrX 5,488,910
25	grl-13	F32D1.4	n/a	chrV 4,363,652	grl-13 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-13 is expressed in larval arcade cells; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
26	srw-14	C41G6.8	n/a	chrV 15,226,687	C. elegans SRW-14 protein; contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000975 (Interleukin-1)
27	Y43F8B.13	Y43F8B.13	n/a	chrV 19,459,852	contains similarity to Puumala virus Nucleocapsid protein (Fragment).; TR:Q8B3A4
28	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
29	T06C12.14	T06C12.14	n/a	chrV 15,900,422	contains similarity to Pfam domain PF01549 ShK domain-like contains similarity to Interpro domain IPR003582 (Metridin-like ShK toxin)
30	C18A11.6	C18A11.6	n/a	chrX 8,034,037
31	tag-263	C11E4.3	n/a	chrX 9,590,518	C. elegans TAG-263 protein; contains similarity to Pfam domain PF00858 Amiloride-sensitive sodium channel contains similarity to Interpro domain IPR001873 (Na+ channel, amiloride-sensitive)
32	clec-34	T25E12.8	n/a	chrV 16,736,555	C. elegans CLEC-34 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
33	sri-39	F33H12.2	n/a	chrII 2,588,572	C. elegans SRI-39 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
34	C24A8.5	C24A8.5	n/a	chrX 4,328,634
35	hlh-10	ZK682.4	n/a	chrV 9,281,043	C. elegans HLH-10 protein; contains similarity to Pfam domain PF00010 Helix-loop-helix DNA-binding domain contains similarity to Interpro domains IPR001092 (Basic helix-loop-helix dimerisation region bHLH), IPR011598 (Helix-loop-helix DNA-binding)
36	sru-11	Y45F10B.6	n/a	chrIV 13,586,085	C. elegans SRU-11 protein; contains similarity to Pfam domain PF02688 Domain of unknown function DUF215 contains similarity to Interpro domain IPR003839 (Protein of unknown function DUF215)
37	C47F8.5	C47F8.5	n/a	chrI 12,322,989	contains similarity to Pfam domain PF01762 Galactosyltransferase contains similarity to Interpro domain IPR002659 (Glycosyl transferase, family 31)
38	F43B10.1	F43B10.1	n/a	chrX 16,662,035
39	K05G3.2	K05G3.2	n/a	chrX 16,497,319
40	F20E11.5	F20E11.5	n/a	chrV 17,461,590	contains similarity to Pfam domain PF03436 Domain of unknown function (DUF281) contains similarity to Interpro domain IPR005098 (Protein of unknown function DUF281)
41	srz-96	Y68A4A.6	n/a	chrV 17,200,545	C. elegans SRZ-96 protein; contains similarity to Interpro domain IPR000418 (Ets)
42	Y63D3A.8	Y63D3A.8	n/a	chrI 14,116,402	contains similarity to Interpro domains IPR002114 (Phosphotransferase system, HPr serine phosphorylation site), IPR006634 (TRAM, LAG1 and CLN8 homology)
43	Y49E10.25	Y49E10.25	n/a	chrIII 12,490,261	contains similarity to Pfam domain PF01764 Lipase (class 3) contains similarity to Interpro domain IPR002921 (Lipase, class 3)
44	C23G10.5	C23G10.5	n/a	chrIII 6,191,540	contains similarity to Pfam domain PF07735 F-box associated contains similarity to Interpro domain IPR012885 (F-box associated type 2)
45	gcy-27	C06A12.4	n/a	chrIV 17,436,419	C. elegans GCY-27 protein; contains similarity to Pfam domains PF00211 (Adenylate and Guanylate cyclase catalytic domain) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001054 (Adenylyl cyclase class-3/4/guanylyl cyclase), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
46	srj-38	T02B11.5	n/a	chrV 883,302	C. elegans SRJ-38 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
47	ncx-6	C07A9.4	n/a	chrIII 9,712,021	ncx-6 encodes a putative Na[+]/Ca[2+] exchanger of uncertain stoichiometry and affinity, orthologous to human SLC24A6 and paralogous to NCX-7/-10; NCX-6 may function intracellularly; NCX-6 has tandem Calx-alpha domains predicted to carry out ion transport; NCX-6 has no obvious function in mass RNAi assays.
48	C04C3.6	C04C3.6	n/a	chrIV 3,421,207	contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
49	nhr-118	F13A2.8	n/a	chrV 4,408,904	C. elegans NHR-118 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core), IPR000003 ()
50	R119.2	R119.2	n/a	chrI 370,004	contains similarity to Pfam domain PF00557 metallopeptidase family M24 contains similarity to Interpro domains IPR000994 (Peptidase M24, catalytic core), IPR001714 (Peptidase M24, methionine aminopeptidase)