UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	scl-26	C50E3.10	6e-114	chrV 7,601,057	C. elegans SCL-26 protein; contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR001283 (Allergen V5/Tpx-1 related)
2	nhr-79	T26H2.9	n/a	chrV 19,209,750	C. elegans NHR-79 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
3	srg-53	T02B11.1	n/a	chrV 880,685	C. elegans SRG-53 protein ;
4	nhr-221	T24A6.8	n/a	chrV 3,534,117	C. elegans NHR-221 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
5	C49D10.7	C49D10.7	n/a	chrII 3,856,247	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domain IPR002656 (Acyltransferase 3)
6	fbxb-58	H11E01.1	n/a	chrX 1,628,252	C. elegans FBXB-58 protein; contains similarity to Pfam domain PF07735 F-box associated contains similarity to Interpro domain IPR012885 (F-box associated type 2)
7	gly-14	M01F1.1	n/a	chrIII 3,491,809	gly-14 encodes a UDP-N-acetyl-D-glucosamine:alpha-3-D-mannoside beta-1, 2-N-acetylglucosaminyltransferase I (GnT 1); GLY-14 exhibits GnT 1 activity when assayed in vitro; a gly-14::lacZ reporter construct is expressed only in the intestine throughout larval and adult stages, with expression generally restricted to the anterior and posterior gut cells.
8	T24H10.5	T24H10.5	n/a	chrII 9,103,999	contains similarity to Arthrobacter sp C2-2 Putative histidine kinase.; TR:Q8KRF2
9	ugt-55	T04H1.7	n/a	chrV 12,257,184	C. elegans UGT-55 protein; contains similarity to Pfam domain PF00201 UDP-glucoronosyl and UDP-glucosyl transferase contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)
10	R08E5.4	R08E5.4	n/a	chrV 3,769,592
11	F10C2.7	F10C2.7	n/a	chrV 12,055,113	contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domains IPR007114 (Major facilitator superfamily), IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
12	srx-76	K12G11.5	n/a	chrV 11,892,608	C. elegans SRX-76 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
13	srab-11	C36C5.8	n/a	chrV 3,146,053	C. elegans SRAB-11 protein; contains similarity to Pfam domain PF02175 C.elegans integral membrane protein Srb contains similarity to Interpro domain IPR002184 (Serpentine beta receptor)
14	C54C8.3	C54C8.3	n/a	chrI 12,447,783	contains similarity to Pfam domain PF01762 Galactosyltransferase contains similarity to Interpro domain IPR002659 (Glycosyl transferase, family 31)
15	Y37H2B.1	Y37H2B.1	n/a	chrV 18,227,570	contains similarity to Xylella fastidiosa Beta-hexosaminidase precursor.; TR:Q9PF31
16	fbxa-7	T20H9.1	n/a	chrIII 2,250,698	C. elegans FBXA-7 protein; contains similarity to Pfam domains PF01827 (FTH domain) , PF00646 (F-box domain) contains similarity to Interpro domains IPR002900 (Protein of unknown function DUF38, Caenorhabditis species), IPR001810 (Cyclin-like F-box)
17	T05A10.6	T05A10.6	n/a	chrX 10,793,737	contains similarity to Interpro domain IPR014044 (SCP-like extracellular)
18	srz-19	F56D6.4	n/a	chrIV 3,920,703	C. elegans SRZ-19 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
19	T02G6.4	T02G6.4	n/a	chrI 11,811,897	contains similarity to Buchnera aphidicola RpoD protein (EC 2.7.7.6).; TR:Q89AY7
20	F22B3.7	F22B3.7	n/a	chrIV 11,418,098	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domain IPR006583 (CW)
21	C28F5.1	C28F5.1	n/a	chrII 7,506,343
22	C25D7.9	C25D7.9	n/a	chrV 15,065,202
23	C50H2.6	C50H2.6	n/a	chrV 9,921,737	contains similarity to Pfam domain PF00501 AMP-binding enzyme contains similarity to Interpro domain IPR000873 (AMP-dependent synthetase and ligase)
24	T24D5.5	T24D5.5	n/a	chrX 12,599,103	contains similarity to Plasmodium falciparum PfEMP1-like protein.; TR:Q8IC59
25	F56F3.3	F56F3.3	n/a	chrIII 4,458,938	contains similarity to Drosophila dasycnemia Wingless (Fragment).; TR:O46305
26	srbc-30	C02A12.3	n/a	chrV 3,479,236	C. elegans SRBC-30 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
27	T28A11.17	T28A11.17	n/a	chrV 3,264,867	T28A11.17 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; T28A11.17 has no clear orthologs in other organisms.
28	srt-36	F47D2.5	n/a	chrV 4,267,330	C. elegans SRT-36 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR002651 (Protein of unknown function DUF32), IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
29	srj-8	T28A11.9	n/a	chrV 3,248,476	C. elegans SRJ-8 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
30	C54C8.5	C54C8.5	n/a	chrI 12,454,277	contains similarity to Pfam domain PF03360 Glycosyltransferase family 43 contains similarity to Interpro domain IPR005027 (Glycosyl transferase, family 43)
31	C49A1.1	C49A1.1	n/a	chrI 14,214,978	contains similarity to Homo sapiens Plasminogen-related protein B precursor; ENSEMBL:ENSP00000245705
32	W03H9.1	W03H9.1	n/a	chrII 14,148,639	contains similarity to Pfam domain PF06918 Protein of unknown function (DUF1280) contains similarity to Interpro domain IPR009689 (Protein of unknown function DUF1280)
33	math-13	C16C4.3	n/a	chrII 1,876,599	C. elegans MATH-13 protein; contains similarity to Pfam domain PF00917 MATH domain contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH)
34	F56C3.3	F56C3.3	n/a	chrX 1,358,147
35	M04C7.3	M04C7.3	n/a	chrI 8,546,387	contains similarity to Brucella melitensis Exopolyphosphatase (EC 3.6.1.11).; TR:Q8YCD4
36	srh-214	T20B3.4	n/a	chrV 16,828,966	C. elegans SRH-214 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
37	thn-3	F28D1.4	n/a	chrIV 12,381,933	C. elegans THN-3 protein; contains similarity to Pfam domain PF00314 Thaumatin family contains similarity to Interpro domain IPR001938 (Thaumatin, pathogenesis-related)
38	F36F12.1	F36F12.1	n/a	chrV 2,101,648	contains similarity to Pfam domain PF01697 Domain of unknown function contains similarity to Interpro domains IPR008167 (Protein of unknown function DUF23, C-terminal), IPR008166 (Protein of unknown function DUF23)
39	clec-46	F07C4.9	n/a	chrV 7,637,516	C. elegans CLEC-46 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
40	K12B6.6	K12B6.6	n/a	chrV 6,294,114
41	E03H4.11	E03H4.11	n/a	chrI 12,433,962	contains similarity to Pfam domain PF01762 Galactosyltransferase contains similarity to Interpro domain IPR002659 (Glycosyl transferase, family 31)
42	sru-35	C33D9.4	n/a	chrIV 8,789,328	C. elegans SRU-35 protein; contains similarity to Pfam domain PF02688 Domain of unknown function DUF215 contains similarity to Interpro domain IPR003839 (Protein of unknown function DUF215)
43	Y6E2A.7	Y6E2A.7	n/a	chrV 15,720,542	contains similarity to Homo sapiens Hypothetical protein FLJ31980; ENSEMBL:ENSP00000285871
44	C07D8.3	C07D8.3	n/a	chrX 7,361,807
45	col-52	D1007.2	n/a	chrI 4,572,052	C. elegans COL-52 protein; contains similarity to Pfam domain PF01391 Collagen triple helix repeat (20 copies) contains similarity to Interpro domains IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat)
46	M01D7.1	M01D7.1	n/a	chrI 1,859,236	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function.
47	B0496.6	B0496.6	n/a	chrIV 7,419,545	contains similarity to Pfam domain PF03134 TB2/DP1, HVA22 family contains similarity to Interpro domain IPR004345 (TB2/DP1 and HVA22 related protein)
48	F58E2.5	F58E2.5	n/a	chrIV 3,445,718	contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR001283 (Allergen V5/Tpx-1 related)
49	F16B4.6	F16B4.6	n/a	chrV 1,588,179	contains similarity to Pfam domain PF00550 Phosphopantetheine attachment site contains similarity to Interpro domains IPR006163 (Phosphopantetheine-binding), IPR009081 (Acyl carrier protein-like), IPR003231 (Acyl carrier protein (ACP))
50	scl-8	C39E9.6	0.000000002	chrIV 13,072,085	C. elegans SCL-8 protein; contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1 related)