UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	twk-37	C48E7.9	0	chrI 6,270,306	C. elegans TWK-37 protein; contains similarity to Pfam domain PF07885 Ion channel contains similarity to Interpro domains IPR003280 (Potassium channel, two pore-domain), IPR003938 (Potassium channel, voltage-dependent, EAG/ELK/ERG), IPR013099 (Ion transport 2)
2	nhr-79	T26H2.9	n/a	chrV 19,209,750	C. elegans NHR-79 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
3	R05D3.3	R05D3.3	n/a	chrIII 8,365,486
4	W02G9.5	W02G9.5	n/a	chrV 2,659,404	contains similarity to Pfam domain PF03372 Endonuclease/Exonuclease/phosphatase family contains similarity to Interpro domain IPR005135 (Endonuclease/exonuclease/phosphatase)
5	gly-14	M01F1.1	n/a	chrIII 3,491,809	gly-14 encodes a UDP-N-acetyl-D-glucosamine:alpha-3-D-mannoside beta-1, 2-N-acetylglucosaminyltransferase I (GnT 1); GLY-14 exhibits GnT 1 activity when assayed in vitro; a gly-14::lacZ reporter construct is expressed only in the intestine throughout larval and adult stages, with expression generally restricted to the anterior and posterior gut cells.
6	F29A7.4	F29A7.4	n/a	chrII 2,750,080	contains similarity to Homo sapiens Uncharacterized protein C2orf32; ENSEMBL:ENSP00000263655
7	F36D4.6	F36D4.6	n/a	chrV 9,427,160
8	C01G5.6	C01G5.6	n/a	chrIV 6,523,650	contains similarity to Interpro domain IPR009007 (Peptidase aspartic, catalytic)
9	F28A12.1	F28A12.1	n/a	chrV 8,639,396	contains similarity to Pfam domain PF00858 Amiloride-sensitive sodium channel contains similarity to Interpro domain IPR001873 (Na+ channel, amiloride-sensitive)
10	fbxb-58	H11E01.1	n/a	chrX 1,628,252	C. elegans FBXB-58 protein; contains similarity to Pfam domain PF07735 F-box associated contains similarity to Interpro domain IPR012885 (F-box associated type 2)
11	his-42	F08G2.3	n/a	chrII 13,828,401	his-42 encodes an H3 histone.
12	C28F5.1	C28F5.1	n/a	chrII 7,506,343
13	scl-26	C50E3.10	n/a	chrV 7,601,057	C. elegans SCL-26 protein; contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR001283 (Allergen V5/Tpx-1 related)
14	srp-8	F20D6.3	n/a	chrV 8,184,913	srp-8 encodes a predicted serpin (serine protease inhibitor)
15	W03G9.5	W03G9.5	n/a	chrI 4,969,127	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
16	srx-76	K12G11.5	n/a	chrV 11,892,608	C. elegans SRX-76 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
17	T02G6.4	T02G6.4	n/a	chrI 11,811,897	contains similarity to Buchnera aphidicola RpoD protein (EC 2.7.7.6).; TR:Q89AY7
18	F56F3.3	F56F3.3	n/a	chrIII 4,458,938	contains similarity to Drosophila dasycnemia Wingless (Fragment).; TR:O46305
19	F54H5.3	F54H5.3	n/a	chrII 6,622,759	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
20	C50H2.6	C50H2.6	n/a	chrV 9,921,737	contains similarity to Pfam domain PF00501 AMP-binding enzyme contains similarity to Interpro domain IPR000873 (AMP-dependent synthetase and ligase)
21	W03H9.1	W03H9.1	n/a	chrII 14,148,639	contains similarity to Pfam domain PF06918 Protein of unknown function (DUF1280) contains similarity to Interpro domain IPR009689 (Protein of unknown function DUF1280)
22	pptr-1	W08G11.4	n/a	chrV 16,362,503	C. elegans PPTR-1 protein; contains similarity to Pfam domain PF01603 Protein phosphatase 2A regulatory B subunit (B56 family) contains similarity to Interpro domains IPR002554 (Protein phosphatase 2A, regulatory B subunit, B56), IPR016024 (Armadillo-type fold)
23	C25D7.9	C25D7.9	n/a	chrV 15,065,202
24	C30H6.8	C30H6.8	n/a	chrIV 17,382,648	contains similarity to Pfam domain PF00085 Thioredoxin contains similarity to Interpro domains IPR012336 (Thioredoxin-like fold), IPR012335 (Thioredoxin fold), IPR013766 (Thioredoxin domain), IPR006662 (Thioredoxin-related)
25	T03F1.7	T03F1.7	n/a	chrI 3,856,739	contains similarity to Pfam domain PF00398 Ribosomal RNA adenine dimethylase contains similarity to Interpro domains IPR001737 (Ribosomal RNA adenine methylase transferase), IPR016861 (Mitochondrial dimethyladenosine transferase 2, mitochondrial precursor)
26	srg-53	T02B11.1	n/a	chrV 880,685	C. elegans SRG-53 protein ;
27	sru-35	C33D9.4	n/a	chrIV 8,789,328	C. elegans SRU-35 protein; contains similarity to Pfam domain PF02688 Domain of unknown function DUF215 contains similarity to Interpro domain IPR003839 (Protein of unknown function DUF215)
28	W06G6.2	W06G6.2	n/a	chrV 16,629,439	contains similarity to Bombyx mori Hunchback protein (Fragment).; SW:HUNB_BOMMO
29	srbc-48	F54B8.6	n/a	chrV 15,820,807	C. elegans SRBC-48 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR002651 (Protein of unknown function DUF32)
30	F54F12.1	F54F12.1	n/a	chrIII 13,051,731	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000694 (Proline-rich region), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase), IPR000340 (Protein-tyrosine phosphatase, dual specificity)
31	C40A11.7	C40A11.7	n/a	chrII 2,149,559	contains similarity to Pfam domain PF02214 K+ channel tetramerisation domain contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation)
32	C49A1.1	C49A1.1	n/a	chrI 14,214,978	contains similarity to Homo sapiens Plasminogen-related protein B precursor; ENSEMBL:ENSP00000245705
33	Y51A2D.8	Y51A2D.8	n/a	chrV 18,551,910	contains similarity to Pfam domains PF08246 (Cathepsin propeptide inhibitor domain (I29)) , PF00112 (Papain family cysteine protease) contains similarity to Interpro domains IPR013128 (Peptidase C1A, papain), IPR013201 (Proteinase inhibitor I29, cathepsin propeptide), IPR000668 (Peptidase C1A, papain C-terminal)
34	srt-36	F47D2.5	n/a	chrV 4,267,330	C. elegans SRT-36 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR002651 (Protein of unknown function DUF32), IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
35	F56D5.9	F56D5.9	n/a	chrIV 9,420,446	contains similarity to Pfam domain PF00023 Ankyrin repeat contains similarity to Interpro domains IPR002110 (Ankyrin), IPR001357 (BRCT)
36	ZK218.11	ZK218.11	n/a	chrV 17,107,962	contains similarity to Pfam domain PF01549 ShK domain-like contains similarity to Interpro domain IPR003582 (Metridin-like ShK toxin)
37	srj-8	T28A11.9	n/a	chrV 3,248,476	C. elegans SRJ-8 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
38	C44E12.1	C44E12.1	n/a	chrX 7,598,320	contains similarity to Pfam domains PF01546 (Peptidase family M20/M25/M40) , PF07687 (Peptidase dimerisation domain) contains similarity to Interpro domains IPR011650 (Peptidase M20, dimerisation), IPR002933 (Peptidase M20)
39	F59D6.6	F59D6.6	n/a	chrV 3,036,408	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
40	T22E5.6	T22E5.6	n/a	chrX 6,415,238	contains similarity to Interpro domain IPR002016 (Haem peroxidase, plant/fungal/bacterial)
41	nhr-252	ZK6.2	n/a	chrV 405,309	C. elegans NHR-252 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000679 (Zinc finger, GATA-type), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
42	ric-19	C32E8.7	n/a	chrI 3,779,897	The ric-19 gene encodes an evolutionarily conserved cytosolic protein involved in neuroendocrine secretion via association with secretory vesicles.
43	F10C2.7	F10C2.7	n/a	chrV 12,055,113	contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domains IPR007114 (Major facilitator superfamily), IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
44	srx-62	K09D9.10	n/a	chrV 3,995,344	C. elegans SRX-62 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR002651 (Protein of unknown function DUF32)
45	gcy-2	R134.2	n/a	chrII 9,509,771	gcy-2 encodes a predicted transmembrane guanylyl cyclase; as loss of gcy-2 activity via RNA-mediated interference does not result in any abnormalities, the precise role of GCY-2 in C. elegans development and/or behavior is not yet known; by sequence similarity, however, GCY-2 can be predicted to function in chemosensory signal transduction.
46	F44D12.10	F44D12.10	n/a	chrIV 10,036,818	contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR007087 (Zinc finger, C2H2-type)
47	R10F2.6	R10F2.6	n/a	chrIII 2,940,362	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)
48	F10B5.3	F10B5.3	n/a	chrII 8,148,546	contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR015880 (Zinc finger, C2H2-like), IPR011333 (BTB/POZ fold), IPR013089 (Kelch related), IPR007087 (Zinc finger, C2H2-type)
49	rab-8	D1037.4	n/a	chrI 3,683,497	rab-8 encodes a rab related protein of the Ras GTPase superfamily that affects ovarian morphology and function, thereby affecting fertility; acts downstream of let-60 with respect to vulval development based on genetic analysis.
50	rbx-2	R10A10.2	n/a	chrI 6,421,299	The R10A10.2 gene encodes an ortholog of the mammalian zinc RING finger protein SAG, which protects cells from apoptosis induced by redox agents and is a component of ubiquitin-ligase (E3) complexes; mammalian SAG binds to the yeast Cul1 protein, complements the lethality of a mutation in yeast Sag, and (when bound to yeast Cul1) has ubiquitin ligase activity and promotes poly-ubiquitination of E2/Cdc34.