UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	C45G3.4	C45G3.4	4e-90	chrI 9,219,134	contains similarity to Dictyostelium discoideum Prespore-specific protein (Fragment).; TR:O97140
2	C49F5.5	C49F5.5	n/a	chrX 11,986,477	contains similarity to Pfam domain PF02135 TAZ zinc finger contains similarity to Interpro domain IPR000197 (Zinc finger, TAZ-type)
3	Y5F2A.3	Y5F2A.3	n/a	chrIV 11,069,794	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domain IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)
4	nhr-158	C17E7.6	n/a	chrV 3,872,180	C. elegans NHR-158 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
5	srh-102	F40D4.11	n/a	chrV 17,164,173	C. elegans SRH-102 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
6	srw-10	ZC482.6	n/a	chrIII 12,755,860	C. elegans SRW-10 protein ;
7	srd-39	R04D3.8	n/a	chrX 13,299,680	C. elegans SRD-39 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
8	C17B7.8	C17B7.8	n/a	chrV 3,322,428	C17B7.8 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; C17B7.8 has no clear orthologs in other organisms.
9	nhr-266	F56H1.2	n/a	chrI 5,738,931	C. elegans NHR-266 protein; contains similarity to Pfam domains PF02206 (Domain of unknown function) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR003125 (Protein of unknown function WSN)
10	C12D5.4	C12D5.4	n/a	chrV 7,672,548
11	T20D4.16	T20D4.16	n/a	chrV 3,394,536
12	W04E12.3	W04E12.3	n/a	chrV 19,737,520	contains similarity to Bacillus subtilis Nuclease sbcCD subunit C.; SW:SBCC_BACSU
13	math-31	F52C6.6	n/a	chrII 1,912,654	C. elegans MATH-31 protein; contains similarity to Pfam domain PF00917 MATH domain contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH)
14	C17B7.12	C17B7.12	n/a	chrV 3,353,590
15	Y57A10B.2	Y57A10B.2	n/a	chrII 12,376,431	contains similarity to Homo sapiens RNA binding protein; ENSEMBL:ENSP00000301740
16	pha-2	M6.3	n/a	chrX 635,373	pha-2 encodes a homeodomain protein that is orthologous to vertebrate Hex proteins required for the development of B lymphocytes and organs derived from foregut endoderm; in C. elegans, pha-2 is essential for proper development and morphogenesis of the pm5 pharyngeal muscles cells during late stages of embryogenesis; in regulating pm5 fate specification, PHA-2 appears to act downstream of the organ identity factor PHA-4, and upstream of ceh-22, whose expression it may negatively regulate in pm5; a rescuing PHA-2::GFP reporter is expressed in pharyngeal cells, intestinal-rectal cells, and postembryonic head neurons.
17	C04B4.6	C04B4.6	n/a	chrX 12,275,348	contains similarity to Corynebacterium efficiens Putative alanyl-tRNA synthetase.; TR:Q8FT23
18	C56G7.2	C56G7.2	n/a	chrIII 3,387,880	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
19	T28A11.6	T28A11.6	n/a	chrV 3,262,901
20	srh-109	T19C9.4	n/a	chrV 17,219,817	C. elegans SRH-109 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
21	srz-6	T21B4.1	n/a	chrII 12,492,894	C. elegans SRZ-6 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
22	C03A7.13	C03A7.13	n/a	chrV 5,191,814	contains similarity to Interpro domains IPR002048 (Calcium-binding EF-hand), IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)
23	nhr-174	E03H4.6	n/a	chrI 12,418,082	C. elegans NHR-174 protein; contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2-type)
24	F25E2.1	F25E2.1	n/a	chrX 803,494	contains similarity to Interpro domain IPR000276 (GPCR, rhodopsin-like)
25	C43H6.6	C43H6.6	n/a	chrX 2,397,074	contains similarity to Pfam domains PF00059 (Lectin C-type domain) , PF00431 (CUB domain) contains similarity to Interpro domains IPR000859 (CUB), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
26	M162.6	M162.6	n/a	chrV 19,782,521	contains similarity to Interpro domain IPR016187 (C-type lectin fold)
27	B0207.10	B0207.10	n/a	chrI 5,959,278
28	T07A5.1	T07A5.1	n/a	chrIII 10,304,668	contains similarity to Pfam domain PF06828 Fukutin-related contains similarity to Interpro domain IPR009644 (Fukutin-related)
29	F46F5.15	F46F5.15	n/a	chrII 788,813
30	fbxa-195	R09B5.1	n/a	chrV 1,435,696	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
31	B0554.3	B0554.3	n/a	chrV 434,275
32	C44C10.6	C44C10.6	n/a	chrX 11,698,664	contains similarity to Streptococcus pneumoniae GtrA family protein.; TR:Q97R28
33	C41G6.12	C41G6.12	n/a	chrV 15,207,410	contains similarity to Interpro domain IPR000168 (Nematode 7TM chemoreceptor (probably olfactory))
34	Y116A8C.1	Y116A8C.1	n/a	chrIV 16,901,344	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domain IPR006583 (CW)
35	R11D1.4	R11D1.4	n/a	chrV 12,713,623	contains similarity to Xenopus laevis Similar to kinesin-like 1.; TR:Q8AVK8
36	H35N09.2	H35N09.2	n/a	chrX 8,604,813
37	F53F4.1	F53F4.1	n/a	chrV 13,585,118	contains similarity to Interpro domain IPR002952 (Eggshell protein)
38	srw-86	C25F9.7	n/a	chrV 19,400,392	C. elegans SRW-86 protein ;
39	F59C12.3	F59C12.3	n/a	chrX 16,606,372	contains similarity to Interpro domain IPR009114 (Angiomotin)
40	B0336.12	B0336.12	n/a	chrIII 5,710,236
41	C38C5.1	C38C5.1	n/a	chrX 5,560,137
42	Y37E11B.7	Y37E11B.7	n/a	chrIV 3,599,789
43	F46B3.8	F46B3.8	n/a	chrV 20,618,293	contains similarity to Pfam domain PF03380 Caenorhabditis protein of unknown function, DUF282 contains similarity to Interpro domain IPR005044 (Protein of unknown function DUF282, Caenorhabditis species)
44	F58G11.4	F58G11.4	n/a	chrV 13,674,239	contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domains IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
45	F07C4.11	F07C4.11	n/a	chrV 7,642,685	contains similarity to Pfam domain PF01549 ShK domain-like contains similarity to Interpro domains IPR000104 (Antifreeze protein, type I), IPR003582 (Metridin-like ShK toxin)
46	Y116A8C.5	Y116A8C.5	n/a	chrIV 16,925,748	Y116A8C.5 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; Y116A8C.5 has no clear orthologs in other organisms.
47	F35F10.13	F35F10.13	n/a	chrV 3,318,633	contains similarity to Pfam domain PF01579 Domain of unknown function DUF19 contains similarity to Interpro domains IPR016638 (Uncharacterised conserved protein UPF0376), IPR002542 (Protein of unknown function DUF19)
48	W04A4.4	W04A4.4	n/a	chrI 13,676,809	contains similarity to Pfam domain PF00648 Calpain family cysteine protease contains similarity to Interpro domain IPR001300 (Peptidase C2, calpain)
49	srt-4	C29G2.4	n/a	chrV 2,578,859	C. elegans SRT-4 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
50	K02A2.5	K02A2.5	n/a	chrII 7,411,491