UCSC C. elegans Gene Sorter

JavaScript is disabled in your web browser

You must have JavaScript enabled in your web browser to use the Genome Browser

UCSC C. elegans Gene Sorter

genome assembly search

sort by display output

#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	C45E5.3	C45E5.3	7.000000000000001e-156	chrIV 5,740,334	contains similarity to Pfam domain PF00704 Glycosyl hydrolases family 18 contains similarity to Interpro domains IPR011583 (Chitinase II), IPR017853 (Glycoside hydrolase, catalytic core), IPR001223 (Glycoside hydrolase, family 18, catalytic domain), IPR013781 (Glycoside hydrolase, subgroup, catalytic core), IPR001574 (Ribosome-inactivating protein)
2	srh-295	ZK1037.8	n/a	chrV 15,331,670	C. elegans SRH-295 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
3	T20B12.5	T20B12.5	n/a	chrIII 7,366,839
4	math-31	F52C6.6	n/a	chrII 1,912,654	C. elegans MATH-31 protein; contains similarity to Pfam domain PF00917 MATH domain contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH)
5	sre-30	F57G9.2	n/a	chrII 12,405,637	C. elegans SRE-30 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
6	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
7	K02F3.7	K02F3.7	n/a	chrIII 836,776
8	T23D5.3	T23D5.3	n/a	chrV 15,733,239	contains similarity to Pfam domain PF03436 Domain of unknown function (DUF281) contains similarity to Interpro domains IPR000104 (Antifreeze protein, type I), IPR001859 (Ribosomal protein P2), IPR005098 (Protein of unknown function DUF281)
9	tag-4	ZK337.4	n/a	chrI 14,984,784	tag-4 encodes a novel protein with low similarity to human putative splicing factor YT521
10	H25K10.4	H25K10.4	n/a	chrIV 16,226,802	contains similarity to Pseudomonas putida Hypothetical protein.; TR:Q8VMP3
11	F52D2.5	F52D2.5	n/a	chrX 1,974,154
12	F58A6.2	F58A6.2	n/a	chrII 5,137,627
13	F35F10.14	F35F10.14	n/a	chrV 3,319,580
14	Y44A6D.1	Y44A6D.1	n/a	chrV 20,782,907	contains similarity to Escherichia coli TraT.; TR:Q7WUD7
15	srbc-25	F40D4.6	n/a	chrV 17,174,753	C. elegans SRBC-25 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
16	K08D10.11	K08D10.11	n/a	chrIV 4,185,528
17	F32D1.8	F32D1.8	n/a	chrV 4,377,156
18	C04F5.2	C04F5.2	n/a	chrV 5,094,981
19	T26E4.2	T26E4.2	n/a	chrV 15,781,680	contains similarity to Salmonella typhimurium Sialidase (EC 3.2.1.18) (Fragment).; TR:Q9R5J8
20	Y75B8A.32	Y75B8A.32	n/a	chrIII 12,356,632	contains similarity to Danio rerio PERQ amino acid-rich with GYF domain-containing protein 2s(Trinucleotide repeat-containing gene 15 protein).; SW:Q4KME6
21	sri-9	Y102A5C.29	n/a	chrV 17,002,496	C. elegans SRI-9 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR000565 (DNA topoisomerase, type IIA, subunit B)
22	sru-25	F31F4.14	n/a	chrV 673,072	C. elegans SRU-25 protein; contains similarity to Pfam domain PF02688 Domain of unknown function DUF215 contains similarity to Interpro domain IPR003839 (Protein of unknown function DUF215)
23	cyp-33C2	C45H4.17	n/a	chrV 2,185,028	C. elegans CYP-33C2 protein; contains similarity to Pfam domain PF00067 Cytochrome P450 contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR002403 (Cytochrome P450, E-class, group IV), IPR002397 (Cytochrome P450, B-class)
24	ptr-13	K07C10.1	n/a	chrII 11,159,735	ptr-13 encodes a nematode-specific member of the sterol sensing domain (SSD) proteins, distantly paralogous to Drosophila PATCHED (PTC) and human PTCH (OMIM:601309, mutated in basal cell nevus syndrome); PTR-13 is weakly required for normal molting from L4 to adult stages; PTR-13 is also required for normal growth to full size and locomotion.
25	T28A11.6	T28A11.6	n/a	chrV 3,262,901
26	C30E1.2	C30E1.2	n/a	chrX 16,927,410
27	F56C3.7	F56C3.7	n/a	chrX 1,370,660
28	srh-102	F40D4.11	n/a	chrV 17,164,173	C. elegans SRH-102 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
29	str-257	C01B4.1	n/a	chrV 2,519,650	C. elegans STR-257 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
30	ZK185.1	ZK185.1	n/a	chrIV 4,550,393	contains similarity to Interpro domain IPR015880 (Zinc finger, C2H2-like)
31	Y37E11B.7	Y37E11B.7	n/a	chrIV 3,599,789
32	srt-37	F47D2.8	n/a	chrV 4,280,809	C. elegans SRT-37 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR002651 (Protein of unknown function DUF32), IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
33	srd-55	K02A2.2	n/a	chrII 7,409,558	C. elegans SRD-55 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
34	R07E5.11	R07E5.11	n/a	chrIII 4,415,004	contains similarity to Salmonella typhimurium Putative surface-exposed virulence protein bigA precursor.; SW:BIGA_SALTY
35	C05D9.4	C05D9.4	n/a	chrX 1,108,239
36	C18E9.10	C18E9.10	n/a	chrII 8,959,611	contains similarity to Pfam domain PF07770 SFT2-like protein contains similarity to Interpro domain IPR011691 (SFT2-like)
37	srd-39	R04D3.8	n/a	chrX 13,299,680	C. elegans SRD-39 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
38	srw-4	F37B4.8	n/a	chrV 2,887,985	C. elegans SRW-4 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
39	F55F8.8	F55F8.8	n/a	chrI 5,667,995	contains similarity to Interpro domain IPR000694 (Proline-rich region)
40	T25B6.1	T25B6.1	n/a	chrX 9,040,675
41	T11F1.8	T11F1.8	n/a	chrII 2,952,479	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
42	F37H8.2	F37H8.2	n/a	chrII 11,173,534	contains similarity to Saccharomyces cerevisiae Structural maintenance of chromosomes (SMC) protein; SGD:YOL034W
43	F52F10.4	F52F10.4	n/a	chrV 1,544,140	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domains IPR002656 (Acyltransferase 3), IPR006621 (Nose resistant to fluoxetine-4, N-terminal)
44	K12H6.2	K12H6.2	n/a	chrII 2,814,250
45	srbc-66	T24A6.5	n/a	chrV 3,531,539	C. elegans SRBC-66 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
46	Y17G7B.13	Y17G7B.13	n/a	chrII 12,045,368	contains similarity to Pfam domain PF06090 Domain of unknown function (DUF941) contains similarity to Interpro domain IPR009286 (Protein of unknown function DUF941)
47	C55B6.4	C55B6.4	n/a	chrX 7,187,869
48	F38B6.7	F38B6.7	n/a	chrX 6,697,033	contains similarity to Interpro domain IPR006150 (Cysteine-rich repeat)
49	F16G10.1	F16G10.1	n/a	chrII 2,402,918	contains similarity to Pfam domain PF02343 Domain of unknown function DUF130 contains similarity to Interpro domain IPR003326 (Protein of unknown function DUF130)
50	srj-6	F31F4.8	n/a	chrV 653,904	C. elegans SRJ-6 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)