UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	C27C7.7	C27C7.7	1e-171	chrI 11,422,886	contains similarity to Pfam domain PF07149 Pes-10 contains similarity to Interpro domain IPR009819 (Pes-10)
2	F55A4.3	F55A4.3	n/a	chrX 1,023,626
3	F47B7.5	F47B7.5	n/a	chrX 3,768,291	contains similarity to Pfam domain PF02343 Domain of unknown function DUF130 contains similarity to Interpro domain IPR003326 (Protein of unknown function DUF130)
4	Y57A10B.6	Y57A10B.6	8e-25	chrII 12,391,276	contains similarity to Pfam domain PF07149 Pes-10 contains similarity to Interpro domain IPR009819 (Pes-10)
5	T23D5.8	T23D5.8	n/a	chrV 15,747,913	contains similarity to Interpro domain IPR000168 (Nematode 7TM chemoreceptor (probably olfactory))
6	F02C12.4	F02C12.4	n/a	chrX 13,393,433	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
7	srw-87	F57G8.4	n/a	chrV 16,337,424	C. elegans SRW-87 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
8	C05G5.5	C05G5.5	n/a	chrX 14,758,374	contains similarity to Homo sapiens hypothetical protein; ENSEMBL:ENSP00000360931
9	B0365.7	B0365.7	n/a	chrV 13,144,616	contains similarity to Pfam domain PF08393 Dynein heavy chain, N-terminal region 2 contains similarity to Interpro domains IPR013602 (Dynein heavy chain, N-terminal region 2), IPR000215 (Protease inhibitor I4, serpin)
10	F26A1.7	F26A1.7	n/a	chrIII 4,819,598
11	srg-41	T19C4.3	n/a	chrV 11,161,148	C. elegans SRG-41 protein; contains similarity to Interpro domains IPR000500 (Connexins), IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
12	F21D12.2	F21D12.2	n/a	chrII 7,318,858
13	F09F9.3	F09F9.3	n/a	chrX 4,120,310
14	T15B7.7	T15B7.7	n/a	chrV 6,824,981	contains similarity to Pfam domain PF03385 Protein of unknown function, DUF288 contains similarity to Interpro domain IPR005049 (Protein of unknown function DUF288)
15	F20E11.5	F20E11.5	n/a	chrV 17,461,590	contains similarity to Pfam domain PF03436 Domain of unknown function (DUF281) contains similarity to Interpro domain IPR005098 (Protein of unknown function DUF281)
16	hot-7	Y48B6A.9	n/a	chrII 14,212,173	hot-7 encodes a predicted membrane-associated protein that is a member of the Ly-6 superfamily of glycosylphosphatidylinositol (GPI)-linked signaling proteins and is homologous to ODR-2, a neuronally expressed protein required for olfaction; as loss of hot-7 activity via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of HOT-7 in C. elegans development and/or behavior is not yet known.
17	T08G5.8	T08G5.8	n/a	chrV 14,048,191	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
18	E03H4.3	E03H4.3	n/a	chrI 12,406,224	contains similarity to Pfam domain PF01762 Galactosyltransferase contains similarity to Interpro domain IPR002659 (Glycosyl transferase, family 31)
19	Y53C12B.2	Y53C12B.2	n/a	chrII 9,740,855	contains similarity to Pfam domain PF00013 KH domain contains similarity to Interpro domains IPR004087 (K Homology), IPR004088 (K Homology, type 1)
20	hlh-27	C17C3.10	n/a	chrII 5,540,531	C. elegans HLH-27 protein; contains similarity to Pfam domain PF00010 Helix-loop-helix DNA-binding domain contains similarity to Interpro domains IPR001092 (Basic helix-loop-helix dimerisation region bHLH), IPR011598 (Helix-loop-helix DNA-binding)
21	C17H1.6	C17H1.6	n/a	chrI 13,131,624	contains similarity to Danio rerio Arginine and glutamate-rich protein 1-B.; SW:Q6P5L7
22	F47G4.6	F47G4.6	n/a	chrI 14,060,105	contains similarity to Pfam domain PF00505 HMG (high mobility group) box contains similarity to Interpro domains IPR000910 (High mobility group box, HMG1/HMG2), IPR009071 (High mobility group box, HMG)
23	cfi-1	T23D8.8	n/a	chrI 9,997,318	cfi-1 encodes a DNA-binding protein containing an AT-rich interaction domain (ARID) that affects differentiation of the URA sensory neurons, AVD, and PVC interneurons; acts downstream of UNC-86 and LIN-32 in controlling URA and IL2 cell fate, and is expressed in some neurons and muscle cells.
24	gst-30	ZK546.11	n/a	chrII 4,934,462	C. elegans GST-30 protein; contains similarity to Pfam domains PF00043 (Glutathione S-transferase, C-terminal domain) , PF02798 (Glutathione S-transferase, N-terminal domain) contains similarity to Interpro domains IPR012336 (Thioredoxin-like fold), IPR012335 (Thioredoxin fold), IPR004046 (Glutathione S-transferase, C-terminal), IPR004045 (Glutathione S-transferase, N-terminal), IPR010987 (Glutathione S-transferase, C-terminal-like)
25	srv-21	H04M03.8	n/a	chrIV 5,876,704	C. elegans SRV-21 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR002651 (Protein of unknown function DUF32)
26	F09F9.1	F09F9.1	n/a	chrX 4,116,127	contains similarity to Dirofilaria immitis Cuticular antigen.; TR:Q965D8
27	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
28	xbx-4	C23H5.3	n/a	chrIV 2,115,124	C. elegans XBX-4 protein ;
29	jkk-1	F35C8.3	n/a	chrX 5,370,204	jkk-1 encodes a member of the MAP kinase kinase superfamily that affects synaptic vesicle localization and is required in type-D motor neurons for normal locomotion; can function in the Hog1 MAP kinase pathway I in yeast as an activator of JNK and is expressed in most neurons
30	F56C3.7	F56C3.7	n/a	chrX 1,370,660
31	srw-124	C44C3.1	n/a	chrV 2,977,215	C. elegans SRW-124 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
32	C07E3.8	C07E3.8	n/a	chrII 10,352,798	contains similarity to Pfam domain PF06542 Protein of unknown function (DUF1114) contains similarity to Interpro domain IPR009497 (Protein of unknown function DUF1114)
33	str-220	C42D4.9	n/a	chrIV 7,170,609	str-220 encodes a seven transmembrane chemoreceptor; microarray analyses indicate that str-220 is expressed at higher levels in the AWB olfactory neurons than the AFD thermosensory neurons; anatomical expression studies confirm expression in the AWB neurons; expression of str-220 in AWB is regulated, in part, by the KIN-29 Ser/Thr kinase.
34	F52E1.3	F52E1.3	n/a	chrV 8,395,551
35	K10C3.4	K10C3.4	n/a	chrI 9,861,391	contains similarity to Xenopus laevis Transmembrane protein 98.; SW:Q6INX1
36	W06G6.12	W06G6.12	n/a	chrV 16,652,565	contains similarity to Methanosarcina mazei Hypothetical protein MM2681.; TR:Q8PTN2
37	F53F1.6	F53F1.6	n/a	chrV 13,416,842	contains similarity to Aeropyrum pernix Elongation factor 1-beta (EF-1-beta) (aEF-1beta).; SW:EF1B_AERPE
38	F10A3.12	F10A3.12	n/a	chrV 16,164,918	contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
39	srt-59	C18H7.8	n/a	chrIV 601,062	C. elegans SRT-59 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR002651 (Protein of unknown function DUF32), IPR006058 (2Fe-2S ferredoxin, iron-sulphur binding site), IPR007087 (Zinc finger, C2H2-type)
40	sre-13	C38C6.4	n/a	chrII 14,635,649	C. elegans SRE-13 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
41	F23C8.12	F23C8.12	n/a	chrI 2,451,478
42	K02E11.6	K02E11.6	n/a	chrV 14,251,141	contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)
43	sre-4	T13F2.5	n/a	chrIV 9,782,834	C. elegans SRE-4 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
44	C18A11.6	C18A11.6	n/a	chrX 8,034,037
45	Y56A3A.33	Y56A3A.33	n/a	chrIII 12,001,104	contains similarity to Pfam domain PF00929 Exonuclease contains similarity to Interpro domains IPR013520 (Exonuclease, RNase T and DNA polymerase III), IPR006055 (Exonuclease), IPR012337 (Polynucleotidyl transferase, Ribonuclease H fold)
46	C17H1.5	C17H1.5	n/a	chrI 13,115,023	contains similarity to Mus musculus Inner centromere protein.; SW:Q9WU62
47	F37H8.2	F37H8.2	n/a	chrII 11,173,534	contains similarity to Saccharomyces cerevisiae Structural maintenance of chromosomes (SMC) protein; SGD:YOL034W
48	F16G10.14	F16G10.14	n/a	chrII 2,398,093	contains similarity to Pfam domain PF02343 Domain of unknown function DUF130 contains similarity to Interpro domain IPR003326 (Protein of unknown function DUF130)
49	C13A2.2	C13A2.2	n/a	chrV 7,286,774	contains similarity to Pfam domain PF01697 Domain of unknown function contains similarity to Interpro domain IPR008166 (Protein of unknown function DUF23)
50	tbx-9	T07C4.6	n/a	chrIII 10,340,812	C. elegans TBX-9 protein; contains similarity to Pfam domain PF00907 T-box contains similarity to Interpro domains IPR008967 (p53-like transcription factor, DNA-binding), IPR001699 (Transcription factor, T-box)