UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	srbc-8	C18B10.5	8e-164	chrV 7,484,197	C. elegans SRBC-8 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
2	nhr-276	Y71A12C.1	n/a	chrI 14,042,539	C. elegans NHR-276 protein; contains similarity to Pfam domain PF00104 Ligand-binding domain of nuclear hormone receptor contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
3	nhr-118	F13A2.8	n/a	chrV 4,408,904	C. elegans NHR-118 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core), IPR000003 ()
4	srbc-54	F54B8.11	3.9999999999999996e-26	chrV 15,833,053	C. elegans SRBC-54 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
5	C45E5.2	C45E5.2	n/a	chrIV 5,742,716	contains similarity to Pfam domain PF00704 Glycosyl hydrolases family 18 contains similarity to Interpro domains IPR011583 (Chitinase II), IPR017853 (Glycoside hydrolase, catalytic core), IPR001223 (Glycoside hydrolase, family 18, catalytic domain), IPR013781 (Glycoside hydrolase, subgroup, catalytic core)
6	sri-39	F33H12.2	n/a	chrII 2,588,572	C. elegans SRI-39 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
7	srh-272	F37B4.4	n/a	chrV 2,864,166	C. elegans SRH-272 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
8	math-16	C16C4.8	n/a	chrII 1,878,171	C. elegans MATH-16 protein; contains similarity to Pfam domain PF00917 MATH domain contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH)
9	glt-4	T22E5.2	n/a	chrX 6,405,125	glt-4 encodes an ortholog of glutamate/aspartate and neutral amino acid transporters.
10	K10B4.4	K10B4.4	n/a	chrII 124,170	contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR002286 (P2 purinoceptor), IPR005390 (Neuromedin U receptor), IPR000276 (GPCR, rhodopsin-like)
11	str-14	T08G3.2	n/a	chrV 16,454,252	C. elegans STR-14 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
12	srx-131	F09F3.2	n/a	chrV 13,846,060	C. elegans SRX-131 protein ;
13	F20E11.7	F20E11.7	n/a	chrV 17,465,622	contains similarity to Pfam domain PF03436 Domain of unknown function (DUF281) contains similarity to Interpro domains IPR005098 (Protein of unknown function DUF281), IPR006662 (Thioredoxin-related)
14	K04H8.2	K04H8.2	n/a	chrI 14,254,220	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domains IPR006583 (CW), IPR016187 (C-type lectin fold), IPR001304 (C-type lectin)
15	K07G5.3	K07G5.3	n/a	chrI 7,163,733	contains similarity to Pfam domain PF00168 C2 domain contains similarity to Interpro domains IPR008973 (C2 calcium/lipid-binding region, CaLB), IPR000008 (C2 calcium-dependent membrane targeting)
16	srg-62	C24B9.12	n/a	chrV 2,741,420	C. elegans SRG-62 protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
17	Y113G7A.14	Y113G7A.14	n/a	chrV 20,132,595	contains similarity to Lumpy skin disease virus LSDV134 variola virus B22R-like protein.; TR:Q91MN0
18	H14A12.5	H14A12.5	n/a	chrIII 7,467,767
19	math-17	C16C4.9	n/a	chrII 1,880,205	C. elegans MATH-17 protein; contains similarity to Pfam domain PF00917 MATH domain contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH)
20	srg-30	W02F12.7	n/a	chrV 6,717,559	C. elegans SRG-30 protein; contains similarity to Pfam domain PF02118 C.elegans Srg family integral membrane protein contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
21	clec-213	C50E3.3	n/a	chrV 7,606,857	C. elegans CLEC-213 protein; contains similarity to Interpro domain IPR016187 (C-type lectin fold)
22	C31B8.9	C31B8.9	n/a	chrV 2,912,083	contains similarity to Pfam domain PF04590 Protein of unknown function, DUF595 contains similarity to Interpro domain IPR007669 (Protein of unknown function DUF595)
23	F52E10.2	F52E10.2	n/a	chrX 16,282,921	contains similarity to Borrelia burgdorferi EppA.; TR:Q840B4
24	T11F1.8	T11F1.8	n/a	chrII 2,952,479	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
25	bath-23	Y49F6C.5	n/a	chrII 3,371,722	C. elegans BATH-23 protein; contains similarity to Pfam domains PF00651 (BTB/POZ domain) , PF00917 (MATH domain) contains similarity to Interpro domains IPR002083 (MATH), IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ)
26	C25D7.9	C25D7.9	n/a	chrV 15,065,202
27	str-238	R09E12.4	n/a	chrV 768,810	C. elegans STR-238 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
28	W02A2.5	W02A2.5	n/a	chrIV 13,344,491	contains similarity to Interpro domains IPR000589 (Ribosomal protein S15), IPR015683 (Glutamate receptor-related), IPR001508 (NMDA receptor)
29	C30E1.2	C30E1.2	n/a	chrX 16,927,410
30	C32B5.7	C32B5.7	n/a	chrII 962,400	contains similarity to Pfam domain PF00112 Papain family cysteine protease contains similarity to Interpro domains IPR013128 (Peptidase C1A, papain), IPR000668 (Peptidase C1A, papain C-terminal)
31	sre-41	Y57A10B.5	n/a	chrII 12,388,981	C. elegans SRE-41 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
32	R07E5.11	R07E5.11	n/a	chrIII 4,415,004	contains similarity to Salmonella typhimurium Putative surface-exposed virulence protein bigA precursor.; SW:BIGA_SALTY
33	C24G7.1	C24G7.1	n/a	chrI 4,110,897	contains similarity to Pfam domain PF00858 Amiloride-sensitive sodium channel contains similarity to Interpro domain IPR001873 (Na+ channel, amiloride-sensitive)
34	T06E8.2	T06E8.2	n/a	chrV 10,036,032
35	C05D9.3	C05D9.3	n/a	chrX 1,114,346	contains similarity to Pfam domain PF07974 EGF-like domain contains similarity to Interpro domains IPR002369 (Integrin beta subunit, N-terminal), IPR001169 (Integrin beta subunit, C-terminal), IPR015812 (Integrin beta subunit), IPR003659 (Plexin/semaphorin/integrin), IPR013032 (EGF-like region, conserved site), IPR013111 (EGF, extracellular)
36	C46H11.3	C46H11.3	n/a	chrI 5,041,773	contains similarity to Pfam domain PF04699 ARP2/3 complex 16 kDa subunit (p16-Arc) contains similarity to Interpro domains IPR006789 (ARP2/3 complex 16 kDa subunit (p16-Arc)), IPR002052 (N-6 adenine-specific DNA methylase, conserved site)
37	srh-71	T10D4.5	n/a	chrII 3,124,197	C. elegans SRH-71 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
38	sra-11	F44F4.13	n/a	chrII 10,909,485	sra-11 encodes an orphan, G protein-coupled seven-transmembrane receptor; SRA-11 is expressed in three classes of interneurons, AIA, AIY, and AVB throughout larval and adult stages, and analysis of sra-11 mutations indicates that sra-11 activity in AIY is essential for olfactory imprinting; sra-11 expression in AIY is positively regulated by the TTX-3 and CEH-23 homeodomain proteins, with TTX-3 required for both initiation and maintenance of expression and CEH-23 required solely for maintenance.
39	K02F3.7	K02F3.7	n/a	chrIII 836,776
40	K04F1.13	K04F1.13	n/a	chrV 1,652,895	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
41	cnc-5	R09B5.10	n/a	chrV 1,445,607	cnc-5 encodes one of six C. elegans caenacin peptides; CNC-5 is predicted to be a secreted protein that, based upon similarity to CNC-2, -4, and -6, may function as an antimicrobial peptide in the innate immune response.
42	C01G5.7	C01G5.7	n/a	chrIV 6,518,588
43	F49C5.4	F49C5.4	n/a	chrII 12,539,002	contains similarity to Pfam domain PF00069 (Eukaryotic protein kinase domain)
44	srx-122	F35F10.8	n/a	chrV 3,296,984	C. elegans SRX-122 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
45	B0564.9	B0564.9	n/a	chrIV 13,137,002	contains similarity to Pfam domains PF00560 (Leucine Rich Repeat) , PF07723 (Leucine Rich Repeat) contains similarity to Interpro domain IPR006553 (Leucine-rich repeat, cysteine-containing subtype)
46	srw-84	Y43F8A.4	n/a	chrV 19,382,978	C. elegans SRW-84 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
47	F37C4.7	F37C4.7	n/a	chrIV 3,878,770
48	ZK1010.4	ZK1010.4	n/a	chrIII 12,982,581	contains similarity to Pfam domain PF01682 DB module contains similarity to Interpro domain IPR002602 (Protein of unknown function DB)
49	nas-10	K09C8.3	n/a	chrX 10,962,779	nas-10 encodes an astacin-like metalloprotease.
50	C50H2.6	C50H2.6	n/a	chrV 9,921,737	contains similarity to Pfam domain PF00501 AMP-binding enzyme contains similarity to Interpro domain IPR000873 (AMP-dependent synthetase and ligase)