UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	srbc-11	C18B10.1	2e-169	chrV 7,494,565	C. elegans SRBC-11 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
2	F59D6.4	F59D6.4	n/a	chrV 3,030,897	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
3	sre-6	F28H7.9	n/a	chrV 10,761,699	C. elegans SRE-6 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
4	nhr-159	C17E7.7	n/a	chrV 3,876,286	C. elegans NHR-159 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
5	F28D1.8	F28D1.8	n/a	chrIV 12,388,613	contains similarity to Interpro domains IPR000104 (Antifreeze protein, type I), IPR007110 (Immunoglobulin-like), IPR001778 (Pollen allergen Poa pIX/Phl pVI, C-terminal), IPR003599 (Immunoglobulin subtype)
6	str-63	C17B7.1	n/a	chrV 3,352,167	C. elegans STR-63 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
7	B0496.1	B0496.1	n/a	chrIV 7,446,888	contains similarity to Pfam domain PF00651 BTB/POZ domain contains similarity to Interpro domains IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ), IPR000210 (BTB/POZ-like)
8	W03G1.8	W03G1.8	n/a	chrIV 527,981
9	C17A2.2	C17A2.2	n/a	chrII 3,847,228	contains similarity to Pfam domain PF01697 Domain of unknown function contains similarity to Interpro domain IPR008166 (Protein of unknown function DUF23)
10	str-207	F26G5.4	n/a	chrV 4,952,370	C. elegans STR-207 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
11	srb-8	F37C12.15	n/a	chrIII 7,172,652	C. elegans SRB-8 protein; contains similarity to Pfam domains PF02117 (C.elegans Sra family integral membrane protein) , PF02175 (C.elegans integral membrane protein Srb) contains similarity to Interpro domains IPR002184 (Serpentine beta receptor), IPR000344 (Nematode chemoreceptor, Sra)
12	srb-1	C27D6.10	n/a	chrII 5,170,361	C. elegans SRB-1 protein; contains similarity to Pfam domain PF02175 C.elegans integral membrane protein Srb contains similarity to Interpro domain IPR002184 (Serpentine beta receptor)
13	T25F10.4	T25F10.4	n/a	chrV 6,761,420	contains similarity to Interpro domain IPR006202 (Neurotransmitter-gated ion-channel ligand-binding)
14	F26A1.6	F26A1.6	n/a	chrIII 4,816,522	contains similarity to Lumbricus rubellus Amine oxidase-like protein (Fragment).; TR:Q94610
15	srv-6	C52B9.5	n/a	chrX 4,258,053	C. elegans SRV-6 protein ;
16	lgc-20	B0491.4	n/a	chrII 11,341,749	C. elegans LGC-20 protein; contains similarity to Interpro domains IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding)
17	tag-52	C02F12.4	n/a	chrX 3,676,290	C. elegans TAG-52 protein; contains similarity to Pfam domain PF00621 RhoGEF domain contains similarity to Interpro domains IPR000219 (Dbl homology (DH) domain), IPR001849 (Pleckstrin-like), IPR011993 (Pleckstrin homology-type)
18	clec-131	W10G11.7	n/a	chrII 3,575,385	C. elegans CLEC-131 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
19	srx-19	T05A12.1	n/a	chrIV 6,874,033	C. elegans SRX-19 protein ;
20	D2089.3	D2089.3	n/a	chrII 10,663,519	contains similarity to Homo sapiens hypothetical protein LOC150383; ENSEMBL:ENSP00000325301
21	T25D1.2	T25D1.2	n/a	chrX 16,516,558	contains similarity to Pfam domain PF06869 Protein of unknown function (DUF1258) contains similarity to Interpro domains IPR009667 (Protein of unknown function DUF1258), IPR011332 (Ribosomal protein, zinc-binding)
22	F14F9.6	F14F9.6	n/a	chrV 5,148,306
23	T11G6.5	T11G6.5	n/a	chrIV 10,839,263	contains similarity to Interpro domain IPR000694 (Proline-rich region)
24	insc-1	F43E2.3	n/a	chrII 7,361,541	C. elegans INSC-1 protein; contains similarity to Interpro domains IPR011989 (Armadillo-like helical), IPR000225 (Armadillo), IPR016024 (Armadillo-type fold)
25	str-204	F10D2.1	n/a	chrV 7,160,334	C. elegans STR-204 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
26	F40G12.4	F40G12.4	n/a	chrV 14,268,178	contains similarity to Pfam domain PF03236 Domain of unknown function DUF263 contains similarity to Interpro domain IPR004920 (Protein of unknown function DUF263)
27	F46F5.5	F46F5.5	n/a	chrII 812,930	contains similarity to Interpro domain IPR001984 (Peptidase S16, Lon protease)
28	nhr-223	T26E4.8	n/a	chrV 15,796,934	C. elegans NHR-223 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
29	nhr-219	T19A5.5	n/a	chrV 8,966,534	C. elegans NHR-219 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) (2)contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
30	C18E3.4	C18E3.4	n/a	chrI 4,202,730
31	C01G5.8	C01G5.8	n/a	chrIV 6,550,691	contains similarity to Pfam domain PF08774 VRR-NUC domain contains similarity to Interpro domain IPR014883 (VRR-NUC)
32	Y71A12C.2	Y71A12C.2	n/a	chrI 14,047,116	contains similarity to Pfam domain PF09335 SNARE associated Golgi protein contains similarity to Interpro domain IPR015414 (SNARE associated Golgi protein)
33	uvt-3	C42D8.3	n/a	chrX 5,090,152	C. elegans UVT-3 protein; contains similarity to Pfam domain PF03630 Fumble contains similarity to Interpro domains IPR002791 (Protein of unknown function DUF89), IPR015844 (Pantothenate kinase, acetyl-CoA regulated, two-domain type), IPR011602 (Fumble)
34	hyl-2	K02G10.6	n/a	chrX 4,698,095	hyl-2 encodes a predicted transmembrane protein that is related to Saccharomyces cerevisiae LAG1 (longevity assurance gene), a protein preferentially expressed in young yeasts; by homology, HYL-2 is predicted to have several possible functions, including regulation of lipid, particularly ceramide, biosynthesis, regulation of lipid transport, and regulation of protein translocation in the endoplasmic reticulum ; however, as loss of hyl-2 activity via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, the precise role of hyl-2 in C. elegans development and/or behavior is not yet known.
35	nhr-147	C03G6.8	n/a	chrV 7,347,394	C. elegans NHR-147 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
36	hil-1	C30G7.1	n/a	chrV 14,951,239	C. elegans HIL-1 protein; contains similarity to Pfam domain PF00538 linker histone H1 and H5 family contains similarity to Interpro domains IPR011991 (Winged helix repressor DNA-binding), IPR005819 (Histone H5), IPR005818 (Histone H1/H5), IPR003216 (Linker histone, N-terminal)
37	K10F12.6	K10F12.6	n/a	chrIII 399,060
38	srg-32	T21C9.7	n/a	chrV 10,587,952	C. elegans SRG-32 protein; contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
39	scl-21	Y43F8B.5	n/a	chrV 19,495,187	C. elegans SCL-21 protein; contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR001283 (Allergen V5/Tpx-1 related)
40	gap-1	T24C12.2	n/a	chrX 2,193,920	gap-1 encodes a member of the Ras GTPase-activating protein family; negatively regulates the let-60 pathway with respect to vulval development.
41	srw-113	ZK1037.9	n/a	chrV 15,333,837	C. elegans SRW-113 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
42	C06C6.1	C06C6.1	n/a	chrV 16,011,384	contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR010916 (TonB box, conserved site)
43	srx-112	T24E12.8	n/a	chrII 3,764,010	C. elegans SRX-112 protein ;
44	R10D12.6	R10D12.6	n/a	chrV 13,949,458	contains similarity to Pfam domain PF01679 Uncharacterized protein family UPF0057 contains similarity to Interpro domain IPR000612 (Protein of unknown function UPF0057)
45	dod-20	B0554.6	n/a	chrV 423,333	C. elegans DOD-20 protein; contains similarity to Pfam domain PF03409 Protein of unknown function (DUF274) contains similarity to Interpro domain IPR005071 (Protein of unknown function DUF274)
46	unc-3	Y16B4A.1	n/a	chrX 14,778,472	The unc-3 gene encodes a protein with homology to immunoglobulin (Ig) domain-containing transcription factors such as OLF-1 or SU(H).
47	nhr-149	C03G6.12	n/a	chrV 7,349,121	C. elegans NHR-149 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
48	C18H9.2	C18H9.2	n/a	chrII 6,690,893	contains similarity to Xenopus laevis PERQ amino acid-rich with GYF domain-containing protein 2s(Trinucleotide repeat-containing gene 15 protein).; SW:Q5U236
49	C04A11.2	C04A11.2	n/a	chrX 13,667,311	contains similarity to Homo sapiens Putative protein TPRXL; ENSEMBL:ENSP00000322097
50	hlh-10	ZK682.4	n/a	chrV 9,281,043	C. elegans HLH-10 protein; contains similarity to Pfam domain PF00010 Helix-loop-helix DNA-binding domain contains similarity to Interpro domains IPR001092 (Basic helix-loop-helix dimerisation region bHLH), IPR011598 (Helix-loop-helix DNA-binding)